RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 CPAMD8Q8IZJ3 1885 aa2.6□□□□□ -1.99
PRPF40A-206ENST00000471167 PXDNQ92626 1479 aa2.59□□□□□ -1.99
PRPF40A-206ENST00000471167 TMSB15BA0A087X1C1 80 aa2.59□□□□□ -1.99
PRPF40A-206ENST00000471167 CFDP00746 253 aaPredicted RBP2.59□□□□□ -1.99
PRPF40A-206ENST00000471167 IGLC2P0DOY2 106 aa2.59□□□□□ -1.99
PRPF40A-206ENST00000471167 IGLC3P0DOY3 106 aa2.59□□□□□ -1.99
PRPF40A-206ENST00000471167 CXCL8P10145 99 aa2.59□□□□□ -1.99
PRPF40A-206ENST00000471167 C2orf82Q6UX34 121 aa2.59□□□□□ -1.99
PRPF40A-206ENST00000471167 CMTM2Q8TAZ6 248 aa2.59□□□□□ -1.99
PRPF40A-206ENST00000471167 AMELYQ99218 206 aa2.59□□□□□ -1.99
PRPF40A-206ENST00000471167 TRGV9Q99603 122 aa2.59□□□□□ -1.99
PRPF40A-206ENST00000471167 COL1A2P08123 1366 aa2.59□□□□□ -2
PRPF40A-206ENST00000471167 SUPT6HQ7KZ85 1726 aaKnown RBP2.59□□□□□ -2
PRPF40A-206ENST00000471167 TRAV13-2A0A0B4J235 113 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 TRBV10-3A0A0K0K1G6 114 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 A0A1W2PPM0 123 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 HCG22E2RYF7 251 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 CCL16O15467 120 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 SNRNP200O75643 2136 aaKnown RBP2.58□□□□□ -2
PRPF40A-206ENST00000471167 P0C880 135 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 ETDBQ3ZM63 59 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 BVES-AS1Q5T3Y7 98 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 CLECL1Q8IZS7 167 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 NXT2Q9NPJ8 142 aaKnown RBP2.58□□□□□ -2
PRPF40A-206ENST00000471167 LHFPL6Q9Y693 200 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 COL24A1Q17RW2 1714 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 TUBGCP6Q96RT7 1819 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 PLXNA2O75051 1894 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 TRPM7Q96QT4 1865 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 PLXNA4Q9HCM2 1894 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 EEA1Q15075 1411 aa2.58□□□□□ -2
PRPF40A-206ENST00000471167 CDK12Q9NYV4 1490 aaPredicted RBP2.58□□□□□ -2
PRPF40A-206ENST00000471167 LRP5O75197 1615 aa2.57□□□□□ -2
PRPF40A-206ENST00000471167 MUC4Q99102 2169 aa2.57□□□□□ -2
PRPF40A-206ENST00000471167 RGPD3A6NKT7 1758 aaPredicted RBP2.57□□□□□ -2
PRPF40A-206ENST00000471167 TRAV12-1A0A0B4J245 112 aa2.57□□□□□ -2
PRPF40A-206ENST00000471167 NDUFC1O43677 76 aa2.57□□□□□ -2
PRPF40A-206ENST00000471167 LY6EQ16553 131 aa2.57□□□□□ -2
PRPF40A-206ENST00000471167 CYP4F30PQ9H0H9 118 aa2.57□□□□□ -2
PRPF40A-206ENST00000471167 NDUFB11Q9NX14 153 aa2.57□□□□□ -2
PRPF40A-206ENST00000471167 R4GN34 69 aa2.57□□□□□ -2
PRPF40A-206ENST00000471167 PTPRFP10586 1907 aa2.57□□□□□ -2
PRPF40A-206ENST00000471167 ANKARQ7Z5J8 1434 aa2.57□□□□□ -2
PRPF40A-206ENST00000471167 PLA2R1Q13018 1463 aa2.57□□□□□ -2
PRPF40A-206ENST00000471167 MAGI3Q5TCQ9 1506 aa2.57□□□□□ -2
PRPF40A-206ENST00000471167 TCHHQ07283 1943 aa2.56□□□□□ -2
PRPF40A-206ENST00000471167 EML5Q05BV3 1969 aa2.56□□□□□ -2
PRPF40A-206ENST00000471167 SYS1-DBNDD2H3BUS1 97 aa2.56□□□□□ -2
PRPF40A-206ENST00000471167 TFF1P04155 84 aa2.56□□□□□ -2
PRPF40A-206ENST00000471167 MPV17LQ2QL34 196 aa2.56□□□□□ -2
PRPF40A-206ENST00000471167 NMSQ5H8A3 153 aa2.56□□□□□ -2
PRPF40A-206ENST00000471167 C9orf163Q8N9P6 203 aa2.56□□□□□ -2
PRPF40A-206ENST00000471167 ZNF431Q8TF32 576 aaPredicted RBP2.56□□□□□ -2
PRPF40A-206ENST00000471167 PTPRMP28827 1452 aa2.56□□□□□ -2
PRPF40A-206ENST00000471167 SHANK2Q9UPX8 1470 aa2.56□□□□□ -2
PRPF40A-206ENST00000471167 DISP1Q96F81 1524 aa2.56□□□□□ -2
PRPF40A-206ENST00000471167 KIF14Q15058 1648 aa2.56□□□□□ -2
PRPF40A-206ENST00000471167 TNS1Q9HBL0 1735 aaKnown RBP2.56□□□□□ -2
PRPF40A-206ENST00000471167 WFDC2Q14508 124 aa2.55□□□□□ -2
PRPF40A-206ENST00000471167 HMGN3Q15651 99 aa2.55□□□□□ -2
PRPF40A-206ENST00000471167 EDC4Q6P2E9 1401 aaKnown RBP2.55□□□□□ -2
PRPF40A-206ENST00000471167 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.55□□□□□ -2
PRPF40A-206ENST00000471167 ZNF833PQ6ZTB9 187 aa2.55□□□□□ -2
PRPF40A-206ENST00000471167 CDC42SE1Q9NRR8 79 aa2.55□□□□□ -2
PRPF40A-206ENST00000471167 UGGT2Q9NYU1 1516 aa2.55□□□□□ -2
PRPF40A-206ENST00000471167 SHROOM2Q13796 1616 aa2.54□□□□□ -2
PRPF40A-206ENST00000471167 KANTRA0A1W2PQU2 76 aa2.54□□□□□ -2
PRPF40A-206ENST00000471167 C2orf70A6NJV1 201 aa2.54□□□□□ -2
PRPF40A-206ENST00000471167 H3BUT2 72 aa2.54□□□□□ -2
PRPF40A-206ENST00000471167 SPATA45Q537H7 98 aa2.54□□□□□ -2
PRPF40A-206ENST00000471167 HEPN1Q6WQI6 88 aa2.54□□□□□ -2
PRPF40A-206ENST00000471167 CYP2G1PQ6ZSU1 146 aa2.54□□□□□ -2
PRPF40A-206ENST00000471167 Q9BRP9 147 aa2.54□□□□□ -2
PRPF40A-206ENST00000471167 CYSTM1Q9H1C7 97 aa2.54□□□□□ -2
PRPF40A-206ENST00000471167 MANBALQ9NQG1 85 aa2.54□□□□□ -2
PRPF40A-206ENST00000471167 PSORS1C2Q9UIG4 136 aa2.54□□□□□ -2
PRPF40A-206ENST00000471167 DIDO1Q9BTC0 2240 aaKnown RBP2.54□□□□□ -2
PRPF40A-206ENST00000471167 KIAA1549LQ6ZVL6 1849 aa2.54□□□□□ -2
PRPF40A-206ENST00000471167 LTN1O94822 1766 aa2.54□□□□□ -2
PRPF40A-206ENST00000471167 PEAK1Q9H792 1746 aa2.54□□□□□ -2
PRPF40A-206ENST00000471167 ATP10BO94823 1461 aa2.53□□□□□ -2
PRPF40A-206ENST00000471167 HFM1A2PYH4 1435 aa2.53□□□□□ -2
PRPF40A-206ENST00000471167 PTPRDP23468 1912 aa2.53□□□□□ -2
PRPF40A-206ENST00000471167 TRBV7-1A0A0A6YYK4 115 aa2.53□□□□□ -2
PRPF40A-206ENST00000471167 TRAV40A0A0B4J280 105 aa2.53□□□□□ -2
PRPF40A-206ENST00000471167 MUC21A0A140T8X8 626 aa2.53□□□□□ -2
PRPF40A-206ENST00000471167 CXorf51AA0A1B0GTR3 108 aa2.53□□□□□ -2
PRPF40A-206ENST00000471167 TMEM30CPA0ZSE6 113 aa2.53□□□□□ -2
PRPF40A-206ENST00000471167 SIX6O95475 246 aa2.53□□□□□ -2
PRPF40A-206ENST00000471167 KRTAP26-1Q6PEX3 210 aa2.53□□□□□ -2
PRPF40A-206ENST00000471167 HIGD1BQ9P298 99 aa2.53□□□□□ -2
PRPF40A-206ENST00000471167 MUC22E2RYF6 1773 aaPredicted RBP2.53□□□□□ -2
PRPF40A-206ENST00000471167 STRCQ7RTU9 1775 aa2.53□□□□□ -2
PRPF40A-206ENST00000471167 NCOA2Q15596 1464 aa2.52□□□□□ -2.01
PRPF40A-206ENST00000471167 MLH3Q9UHC1 1453 aa2.52□□□□□ -2.01
PRPF40A-206ENST00000471167 MYH4Q9Y623 1939 aa2.52□□□□□ -2.01
PRPF40A-206ENST00000471167 MYO16Q9Y6X6 1858 aa2.52□□□□□ -2.01
PRPF40A-206ENST00000471167 COL11A1P12107 1806 aaPredicted RBP2.52□□□□□ -2.01
PRPF40A-206ENST00000471167 IGLV4-60A0A075B6I1 120 aa2.52□□□□□ -2.01
PRPF40A-206ENST00000471167 A0A0G2JND7 137 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms