RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 FAM74A4Q5TZK3 123 aa4.84□□□□□ -1.63
SNRPD3-205ENST00000468770 SAMD10Q9BYL1 202 aa4.84□□□□□ -1.63
SNRPD3-205ENST00000468770 KRTAP4-5Q9BYR2 181 aa4.84□□□□□ -1.63
SNRPD3-205ENST00000468770 LRP1BQ9NZR2 4599 aa4.84□□□□□ -1.64
SNRPD3-205ENST00000468770 A0A087WWC5 75 aa4.83□□□□□ -1.64
SNRPD3-205ENST00000468770 A0A087WWL8 130 aa4.83□□□□□ -1.64
SNRPD3-205ENST00000468770 NDUFA5Q16718 116 aa4.83□□□□□ -1.64
SNRPD3-205ENST00000468770 UFSP1Q6NVU6 142 aa4.83□□□□□ -1.64
SNRPD3-205ENST00000468770 TMUB2Q71RG4 321 aa4.83□□□□□ -1.64
SNRPD3-205ENST00000468770 BAGE2Q86Y30 109 aa4.83□□□□□ -1.64
SNRPD3-205ENST00000468770 ZFP82Q8N141 532 aa4.83□□□□□ -1.64
SNRPD3-205ENST00000468770 Q8N1X5 172 aa4.83□□□□□ -1.64
SNRPD3-205ENST00000468770 C14orf178Q8N769 122 aaPredicted RBP4.83□□□□□ -1.64
SNRPD3-205ENST00000468770 SFRP2Q96HF1 295 aa4.83□□□□□ -1.64
SNRPD3-205ENST00000468770 Q9HAA7 133 aa4.83□□□□□ -1.64
SNRPD3-205ENST00000468770 SCRT2Q9NQ03 307 aa4.83□□□□□ -1.64
SNRPD3-205ENST00000468770 SCO2A0A1W2PP80 73 aa4.82□□□□□ -1.64
SNRPD3-205ENST00000468770 EIF5AL1Q6IS14 154 aaKnown RBP4.82□□□□□ -1.64
SNRPD3-205ENST00000468770 Q9UF83 564 aa4.82□□□□□ -1.64
SNRPD3-205ENST00000468770 DNAH5Q8TE73 4624 aa4.81□□□□□ -1.64
SNRPD3-205ENST00000468770 TRAV8-3A0A0A6YYJ7 113 aa4.81□□□□□ -1.64
SNRPD3-205ENST00000468770 TEX46H3BTG2 121 aa4.81□□□□□ -1.64
SNRPD3-205ENST00000468770 LINC00694P0DN24 101 aa4.81□□□□□ -1.64
SNRPD3-205ENST00000468770 GCSHP23434 173 aa4.81□□□□□ -1.64
SNRPD3-205ENST00000468770 RAB5CP51148 216 aa4.81□□□□□ -1.64
SNRPD3-205ENST00000468770 LAGE3Q14657 143 aa4.81□□□□□ -1.64
SNRPD3-205ENST00000468770 TOR2AQ5JU69 321 aa4.81□□□□□ -1.64
SNRPD3-205ENST00000468770 PRR27Q6MZM9 219 aa4.81□□□□□ -1.64
SNRPD3-205ENST00000468770 MLST8Q9BVC4 326 aa4.81□□□□□ -1.64
SNRPD3-205ENST00000468770 TM2D2Q9BX73 214 aa4.81□□□□□ -1.64
SNRPD3-205ENST00000468770 GNG13Q9P2W3 67 aa4.81□□□□□ -1.64
SNRPD3-205ENST00000468770 URGCP-MRPS24S4R325 110 aa4.81□□□□□ -1.64
SNRPD3-205ENST00000468770 HSPG2P98160 4391 aa4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 TRBV7-3A0A075B6L6 115 aa4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 IGLV5-52A0A0A0MRZ9 124 aa4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 TRBV10-1A0A0K0K1A3 114 aa4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 LRCOL1A6NCL2 159 aa4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 RPL35P42766 123 aaKnown RBP4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 KRTAP10-1P60331 282 aa4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 SSTP61278 116 aa4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 CCL20P78556 96 aa4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 RPL36AP83881 106 aaKnown RBP4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 RPL19P84098 196 aaKnown RBP4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 SPANXN1Q5VSR9 72 aa4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 KCNIP4Q6PIL6 250 aa4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 DAZ4Q86SG3 579 aaKnown RBP4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 Q8N3U1 123 aa4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 NTN5Q8WTR8 489 aaPredicted RBP4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 RPL36ALQ969Q0 106 aaKnown RBP4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 MANBALQ9NQG1 85 aa4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 DAZ3Q9NR90 486 aaKnown RBP4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 ABCA13Q86UQ4 5058 aa4.8□□□□□ -1.64
SNRPD3-205ENST00000468770 A0A087WX48 190 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 TRAV1-1A0A0B4J248 108 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 MUC21A0A0G2JKD1 596 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 MUC21A0A140T8X8 626 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 EPM2AB3EWF7 344 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 F5H697 171 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 ATP6V1G1O75348 118 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 CXCL1P09341 107 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 OR5AL1P0C617 328 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 S100A1P23297 94 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 XGP55808 180 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 RAB4BP61018 213 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 ZNF56Q15929 161 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 Q8N814 137 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 OR10AG1Q8NH19 301 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 DAZAP1Q96EP5 407 aaKnown RBP4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 SSBP4Q9BWG4 385 aaPredicted RBP4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 COX11Q9Y6N1 276 aa4.79□□□□□ -1.64
SNRPD3-205ENST00000468770 TMEM262E9PQX1 116 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 SNAI2O43623 268 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 IFNA1P01562 189 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 SMIM17P0DL12 118 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 SULT1A2P50226 295 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 UBE2D3P61077 147 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 UBE2D2P62837 147 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 ELOBQ15370 118 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 CENPWQ5EE01 88 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 NIT1Q86X76 327 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 TCTE3Q8IZS6 198 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 OR10G8Q8NGN5 311 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 C11orf52Q96A22 123 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 RMI2Q96E14 147 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 DERL1Q9BUN8 251 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 TPPP3Q9BW30 176 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 KLK12Q9UKR0 248 aa4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 APOBP04114 4563 aaKnown RBP4.78□□□□□ -1.64
SNRPD3-205ENST00000468770 TRBV6-8A0A0A6YYG3 113 aa4.77□□□□□ -1.65
SNRPD3-205ENST00000468770 RAB19A4D1S5 217 aa4.77□□□□□ -1.65
SNRPD3-205ENST00000468770 PDE6DO43924 150 aa4.77□□□□□ -1.65
SNRPD3-205ENST00000468770 GNG4P50150 75 aa4.77□□□□□ -1.65
SNRPD3-205ENST00000468770 RPS20P60866 119 aaKnown RBP4.77□□□□□ -1.65
SNRPD3-205ENST00000468770 MEF2BQ02080 365 aaPredicted RBP4.77□□□□□ -1.65
SNRPD3-205ENST00000468770 SLC51BQ86UW2 128 aa4.77□□□□□ -1.65
SNRPD3-205ENST00000468770 NEXN-AS1Q8NBZ9 246 aa4.77□□□□□ -1.65
SNRPD3-205ENST00000468770 OR2D3Q8NGH3 330 aa4.77□□□□□ -1.65
SNRPD3-205ENST00000468770 FRZBQ92765 325 aa4.77□□□□□ -1.65
SNRPD3-205ENST00000468770 UBE2WQ96B02 151 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms