RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 LINC01587Q99440 93 aa10.96□□□□□ -0.65
TSSC4-208ENST00000467308 CNFNQ9BYD5 112 aa10.96□□□□□ -0.65
TSSC4-208ENST00000467308 NAGKQ9UJ70 344 aa10.96□□□□□ -0.65
TSSC4-208ENST00000467308 LINC00588Q9Y4M8 146 aa10.96□□□□□ -0.65
TSSC4-208ENST00000467308 TRBV24-1A0A075B6N3 115 aa10.95□□□□□ -0.66
TSSC4-208ENST00000467308 TMSB15BA0A087X1C1 80 aa10.95□□□□□ -0.66
TSSC4-208ENST00000467308 IGHV3-16A0A0C4DH30 117 aa10.95□□□□□ -0.66
TSSC4-208ENST00000467308 SNAI2O43623 268 aa10.95□□□□□ -0.66
TSSC4-208ENST00000467308 PRM2P04554 102 aa10.95□□□□□ -0.66
TSSC4-208ENST00000467308 TYMSP04818 313 aa10.95□□□□□ -0.66
TSSC4-208ENST00000467308 ATP5G1P05496 136 aa10.95□□□□□ -0.66
TSSC4-208ENST00000467308 SPATA12Q7Z6I5 190 aa10.95□□□□□ -0.66
TSSC4-208ENST00000467308 CBLN2Q8IUK8 224 aa10.95□□□□□ -0.66
TSSC4-208ENST00000467308 FER1L6-AS1Q8NA97 138 aa10.95□□□□□ -0.66
TSSC4-208ENST00000467308 NUP35Q8NFH5 326 aa10.95□□□□□ -0.66
TSSC4-208ENST00000467308 PLAC8L1A1L4L8 177 aa10.94□□□□□ -0.66
TSSC4-208ENST00000467308 CBY3A6NI87 242 aa10.94□□□□□ -0.66
TSSC4-208ENST00000467308 SCO1O75880 301 aa10.94□□□□□ -0.66
TSSC4-208ENST00000467308 GZMBP10144 247 aa10.94□□□□□ -0.66
TSSC4-208ENST00000467308 RNASE3P12724 160 aaKnown RBP10.94□□□□□ -0.66
TSSC4-208ENST00000467308 ELOBQ15370 118 aa10.94□□□□□ -0.66
TSSC4-208ENST00000467308 ZNF493Q6ZR52 646 aa10.94□□□□□ -0.66
TSSC4-208ENST00000467308 GRIFINA4D1Z8 144 aa10.93□□□□□ -0.66
TSSC4-208ENST00000467308 GNRH2O43555 120 aa10.93□□□□□ -0.66
TSSC4-208ENST00000467308 ATP5L2Q7Z4Y8 100 aa10.93□□□□□ -0.66
TSSC4-208ENST00000467308 PTH2Q96A98 100 aa10.93□□□□□ -0.66
TSSC4-208ENST00000467308 C9orf85Q96MD7 179 aa10.93□□□□□ -0.66
TSSC4-208ENST00000467308 HERC1Q15751 4861 aa10.93□□□□□ -0.66
TSSC4-208ENST00000467308 A0A1B0GW15 77 aa10.92□□□□□ -0.66
TSSC4-208ENST00000467308 ARMS2P0C7Q2 107 aa10.92□□□□□ -0.66
TSSC4-208ENST00000467308 AZU1P20160 251 aa10.92□□□□□ -0.66
TSSC4-208ENST00000467308 S100A4P26447 101 aaKnown RBP10.92□□□□□ -0.66
TSSC4-208ENST00000467308 TCL1AP56279 114 aa10.92□□□□□ -0.66
TSSC4-208ENST00000467308 TTC32Q5I0X7 151 aa10.92□□□□□ -0.66
TSSC4-208ENST00000467308 PIK3CD-AS1Q5SR53 167 aa10.92□□□□□ -0.66
TSSC4-208ENST00000467308 RASL11AQ6T310 242 aa10.92□□□□□ -0.66
TSSC4-208ENST00000467308 LYZL1Q6UWQ5 148 aa10.92□□□□□ -0.66
TSSC4-208ENST00000467308 C11orf72Q8NBR9 251 aa10.92□□□□□ -0.66
TSSC4-208ENST00000467308 RNASE8Q8TDE3 154 aaKnown RBP10.92□□□□□ -0.66
TSSC4-208ENST00000467308 TMEM263Q8WUH6 116 aaKnown RBP10.92□□□□□ -0.66
TSSC4-208ENST00000467308 Q9H8V8 135 aa10.92□□□□□ -0.66
TSSC4-208ENST00000467308 URGCP-MRPS24S4R325 110 aa10.92□□□□□ -0.66
TSSC4-208ENST00000467308 A0A1B0GUT8 65 aa10.91□□□□□ -0.66
TSSC4-208ENST00000467308 NXPH4O95158 308 aa10.91□□□□□ -0.66
TSSC4-208ENST00000467308 BTF3P20290 206 aaKnown RBP10.91□□□□□ -0.66
TSSC4-208ENST00000467308 CACNG7P62955 275 aa10.91□□□□□ -0.66
TSSC4-208ENST00000467308 ZNF415Q09FC8 603 aa10.91□□□□□ -0.66
TSSC4-208ENST00000467308 PGLYRP4Q96LB8 373 aa10.91□□□□□ -0.66
TSSC4-208ENST00000467308 SPXQ9BT56 116 aa10.91□□□□□ -0.66
TSSC4-208ENST00000467308 MDFICQ9P1T7 246 aa10.91□□□□□ -0.66
TSSC4-208ENST00000467308 A0A1B0GXF2 115 aa10.9□□□□□ -0.66
TSSC4-208ENST00000467308 H3BVH4 76 aa10.9□□□□□ -0.66
TSSC4-208ENST00000467308 BORCS7Q96B45 105 aa10.9□□□□□ -0.66
TSSC4-208ENST00000467308 C16orf74Q96GX8 76 aa10.9□□□□□ -0.66
TSSC4-208ENST00000467308 TIMM8BQ9Y5J9 83 aaPredicted RBP10.9□□□□□ -0.66
TSSC4-208ENST00000467308 COLCA2A8K830 154 aa10.89□□□□□ -0.67
TSSC4-208ENST00000467308 KRTAP10-2P60368 255 aa10.89□□□□□ -0.67
TSSC4-208ENST00000467308 DAZ2Q13117 558 aaKnown RBP10.89□□□□□ -0.67
TSSC4-208ENST00000467308 RIGQ13278 110 aa10.89□□□□□ -0.67
TSSC4-208ENST00000467308 COX19Q49B96 90 aa10.89□□□□□ -0.67
TSSC4-208ENST00000467308 KRTAP1-5Q9BYS1 174 aa10.89□□□□□ -0.67
TSSC4-208ENST00000467308 DMBT1Q9UGM3 2413 aaPredicted RBP10.88□□□□□ -0.67
TSSC4-208ENST00000467308 TGIF2-C20orf24A0A0A6YYL0 155 aa10.88□□□□□ -0.67
TSSC4-208ENST00000467308 S100A8P05109 93 aa10.88□□□□□ -0.67
TSSC4-208ENST00000467308 HTN1P15515 57 aa10.88□□□□□ -0.67
TSSC4-208ENST00000467308 GATD1Q8NB37 220 aa10.88□□□□□ -0.67
TSSC4-208ENST00000467308 OR10AG1Q8NH19 301 aa10.88□□□□□ -0.67
TSSC4-208ENST00000467308 UPK3BQ9BT76 320 aa10.88□□□□□ -0.67
TSSC4-208ENST00000467308 TPPP3Q9BW30 176 aa10.88□□□□□ -0.67
TSSC4-208ENST00000467308 PHLDA3Q9Y5J5 127 aa10.88□□□□□ -0.67
TSSC4-208ENST00000467308 HBBP68871 147 aa10.87□□□□□ -0.67
TSSC4-208ENST00000467308 ZFP82Q8N141 532 aa10.87□□□□□ -0.67
TSSC4-208ENST00000467308 GSN-AS1Q9NRJ2 163 aa10.87□□□□□ -0.67
TSSC4-208ENST00000467308 M0R2P5 195 aa10.86□□□□□ -0.67
TSSC4-208ENST00000467308 NTF3P20783 257 aa10.86□□□□□ -0.67
TSSC4-208ENST00000467308 SPANXN1Q5VSR9 72 aa10.86□□□□□ -0.67
TSSC4-208ENST00000467308 SYT8Q8NBV8 401 aa10.86□□□□□ -0.67
TSSC4-208ENST00000467308 GNB1LQ9BYB4 327 aa10.86□□□□□ -0.67
TSSC4-208ENST00000467308 NOP10Q9NPE3 64 aaKnown RBP10.86□□□□□ -0.67
TSSC4-208ENST00000467308 TRAV26-1A0A087WT03 109 aa10.85□□□□□ -0.67
TSSC4-208ENST00000467308 SNURFLB1AK76 121 aa10.85□□□□□ -0.67
TSSC4-208ENST00000467308 EPM2AB3EWF7 344 aa10.85□□□□□ -0.67
TSSC4-208ENST00000467308 MRPL54Q6P161 138 aaKnown RBP10.85□□□□□ -0.67
TSSC4-208ENST00000467308 RASL10AQ92737 203 aa10.85□□□□□ -0.67
TSSC4-208ENST00000467308 H3BNG1 76 aa10.84□□□□□ -0.67
TSSC4-208ENST00000467308 SPINK4O60575 86 aa10.84□□□□□ -0.67
TSSC4-208ENST00000467308 MT-ND6P03923 174 aa10.84□□□□□ -0.67
TSSC4-208ENST00000467308 RAB5AP20339 215 aa10.84□□□□□ -0.67
TSSC4-208ENST00000467308 TWIST1Q15672 202 aa10.84□□□□□ -0.67
TSSC4-208ENST00000467308 DMRTA1Q5VZB9 504 aa10.84□□□□□ -0.67
TSSC4-208ENST00000467308 LINC00612Q8N6U2 182 aa10.84□□□□□ -0.67
TSSC4-208ENST00000467308 TRGC1P0CF51 173 aa10.83□□□□□ -0.68
TSSC4-208ENST00000467308 ESRGQ1W209 222 aa10.83□□□□□ -0.68
TSSC4-208ENST00000467308 ZNF876PQ49A33 203 aa10.83□□□□□ -0.68
TSSC4-208ENST00000467308 TMEM136Q6ZRR5 245 aa10.83□□□□□ -0.68
TSSC4-208ENST00000467308 TMEM191AQ9H0A3 160 aa10.83□□□□□ -0.68
TSSC4-208ENST00000467308 MRPS16Q9Y3D3 137 aaKnown RBP10.83□□□□□ -0.68
TSSC4-208ENST00000467308 M0R381 172 aa10.82□□□□□ -0.68
TSSC4-208ENST00000467308 HLA-DQA1P01909 254 aa10.82□□□□□ -0.68
TSSC4-208ENST00000467308 AP1S3Q96PC3 154 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms