RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 PDE6DO43924 150 aa6.93□□□□□ -1.3
CD40-204ENST00000466205 CIDEAO60543 219 aa6.93□□□□□ -1.3
CD40-204ENST00000466205 IGLV2-8P01709 118 aa6.93□□□□□ -1.3
CD40-204ENST00000466205 OR10J3Q5JRS4 329 aa6.93□□□□□ -1.3
CD40-204ENST00000466205 ZFP82Q8N141 532 aa6.93□□□□□ -1.3
CD40-204ENST00000466205 SFRP2Q96HF1 295 aa6.93□□□□□ -1.3
CD40-204ENST00000466205 VAX2Q9UIW0 290 aa6.93□□□□□ -1.3
CD40-204ENST00000466205 IGHV3-30P01768 117 aa6.92□□□□□ -1.3
CD40-204ENST00000466205 IGHV3-33P01772 117 aa6.92□□□□□ -1.3
CD40-204ENST00000466205 IGHV3-30-3P0DP02 117 aa6.92□□□□□ -1.3
CD40-204ENST00000466205 IGHV3-30-5P0DP03 117 aa6.92□□□□□ -1.3
CD40-204ENST00000466205 CEBPGP53567 150 aa6.92□□□□□ -1.3
CD40-204ENST00000466205 SPANXN1Q5VSR9 72 aa6.92□□□□□ -1.3
CD40-204ENST00000466205 UFSP1Q6NVU6 142 aa6.92□□□□□ -1.3
CD40-204ENST00000466205 ZFP2Q6ZN57 461 aa6.92□□□□□ -1.3
CD40-204ENST00000466205 ATP6V0E2Q8NHE4 81 aa6.92□□□□□ -1.3
CD40-204ENST00000466205 DAZAP1Q96EP5 407 aaKnown RBP6.92□□□□□ -1.3
CD40-204ENST00000466205 TRBV20OR9-2A0A075B6H5 130 aa6.91□□□□□ -1.3
CD40-204ENST00000466205 RBFOX3A6NFN3 312 aa6.91□□□□□ -1.3
CD40-204ENST00000466205 CRYGDP07320 174 aa6.91□□□□□ -1.3
CD40-204ENST00000466205 EVI2AP22794 236 aa6.91□□□□□ -1.3
CD40-204ENST00000466205 FUSP35637 526 aaKnown RBP eCLIP6.91□□□□□ -1.3
CD40-204ENST00000466205 ZNF56Q15929 161 aa6.91□□□□□ -1.3
CD40-204ENST00000466205 PIK3CD-AS1Q5SR53 167 aa6.91□□□□□ -1.3
CD40-204ENST00000466205 OR2D3Q8NGH3 330 aa6.91□□□□□ -1.3
CD40-204ENST00000466205 TRAV9-2A0A087WT02 112 aa6.9□□□□□ -1.3
CD40-204ENST00000466205 TRAV8-6A0A0B4J262 113 aa6.9□□□□□ -1.3
CD40-204ENST00000466205 IGHV3-38A0A0C4DH36 116 aa6.9□□□□□ -1.3
CD40-204ENST00000466205 RHODO00212 210 aa6.9□□□□□ -1.3
CD40-204ENST00000466205 MED14OSP0DP75 135 aa6.9□□□□□ -1.3
CD40-204ENST00000466205 BLOC1S1P78537 153 aa6.9□□□□□ -1.3
CD40-204ENST00000466205 C4orf48Q5BLP8 95 aa6.9□□□□□ -1.3
CD40-204ENST00000466205 TOR2AQ5JU69 321 aa6.9□□□□□ -1.3
CD40-204ENST00000466205 SH2D6Q7Z4S9 175 aa6.9□□□□□ -1.3
CD40-204ENST00000466205 SPATA12Q7Z6I5 190 aa6.9□□□□□ -1.3
CD40-204ENST00000466205 Q8N3U1 123 aa6.9□□□□□ -1.3
CD40-204ENST00000466205 LYPD6BQ8NI32 183 aa6.9□□□□□ -1.3
CD40-204ENST00000466205 GTSF1LQ9H1H1 148 aa6.9□□□□□ -1.3
CD40-204ENST00000466205 C19orf71A6NCJ1 209 aa6.89□□□□□ -1.31
CD40-204ENST00000466205 C16orf90A8MZG2 172 aa6.89□□□□□ -1.31
CD40-204ENST00000466205 SNAI2O43623 268 aa6.89□□□□□ -1.31
CD40-204ENST00000466205 P01737 135 aa6.89□□□□□ -1.31
CD40-204ENST00000466205 CXCL1P09341 107 aa6.89□□□□□ -1.31
CD40-204ENST00000466205 DNAH10OSP0CZ25 163 aa6.89□□□□□ -1.31
CD40-204ENST00000466205 CLLU1Q5K131 121 aa6.89□□□□□ -1.31
CD40-204ENST00000466205 LELP1Q5T871 98 aa6.89□□□□□ -1.31
CD40-204ENST00000466205 Q6ZRN7 208 aaPredicted RBP6.89□□□□□ -1.31
CD40-204ENST00000466205 FER1L6-AS1Q8NA97 138 aa6.89□□□□□ -1.31
CD40-204ENST00000466205 RNASE7Q9H1E1 156 aaKnown RBP6.89□□□□□ -1.31
CD40-204ENST00000466205 Q9HAA7 133 aa6.89□□□□□ -1.31
CD40-204ENST00000466205 DNAH5Q8TE73 4624 aa6.89□□□□□ -1.31
CD40-204ENST00000466205 F5H697 171 aa6.88□□□□□ -1.31
CD40-204ENST00000466205 K7EN84 100 aa6.88□□□□□ -1.31
CD40-204ENST00000466205 MGPP08493 103 aa6.88□□□□□ -1.31
CD40-204ENST00000466205 LINC00694P0DN24 101 aa6.88□□□□□ -1.31
CD40-204ENST00000466205 KRTAP10-2P60368 255 aa6.88□□□□□ -1.31
CD40-204ENST00000466205 NUDT10Q8NFP7 164 aa6.88□□□□□ -1.31
CD40-204ENST00000466205 NUDT11Q96G61 164 aa6.88□□□□□ -1.31
CD40-204ENST00000466205 SSBP4Q9BWG4 385 aaPredicted RBP6.88□□□□□ -1.31
CD40-204ENST00000466205 EIF5A2Q9GZV4 153 aaKnown RBP6.88□□□□□ -1.31
CD40-204ENST00000466205 MSRB1Q9NZV6 116 aa6.88□□□□□ -1.31
CD40-204ENST00000466205 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
CD40-204ENST00000466205 PKHD1P08F94 4074 aa6.87□□□□□ -1.31
CD40-204ENST00000466205 OR5AL1P0C617 328 aa6.87□□□□□ -1.31
CD40-204ENST00000466205 SMIM17P0DL12 118 aa6.87□□□□□ -1.31
CD40-204ENST00000466205 TAGLN2P37802 199 aaKnown RBP6.87□□□□□ -1.31
CD40-204ENST00000466205 TIRAPP58753 221 aa6.87□□□□□ -1.31
CD40-204ENST00000466205 RPL36AP83881 106 aaKnown RBP6.87□□□□□ -1.31
CD40-204ENST00000466205 LINC01556Q5JQF7 62 aa6.87□□□□□ -1.31
CD40-204ENST00000466205 OCC1Q8TAD7 63 aa6.87□□□□□ -1.31
CD40-204ENST00000466205 RPL36ALQ969Q0 106 aaKnown RBP6.87□□□□□ -1.31
CD40-204ENST00000466205 SMIM12Q96EX1 92 aa6.87□□□□□ -1.31
CD40-204ENST00000466205 LINC00862A6NCI5 91 aa6.86□□□□□ -1.31
CD40-204ENST00000466205 IGLC6P0CF74 106 aa6.86□□□□□ -1.31
CD40-204ENST00000466205 RPS20P60866 119 aaKnown RBP6.86□□□□□ -1.31
CD40-204ENST00000466205 RAB4BP61018 213 aa6.86□□□□□ -1.31
CD40-204ENST00000466205 LYZL1Q6UWQ5 148 aa6.86□□□□□ -1.31
CD40-204ENST00000466205 NFE4Q86UQ8 179 aa6.86□□□□□ -1.31
CD40-204ENST00000466205 NEXN-AS1Q8NBZ9 246 aa6.86□□□□□ -1.31
CD40-204ENST00000466205 AP1S3Q96PC3 154 aa6.86□□□□□ -1.31
CD40-204ENST00000466205 TRBV7-3A0A075B6L6 115 aa6.85□□□□□ -1.31
CD40-204ENST00000466205 XKRY2A2RUG3 117 aa6.85□□□□□ -1.31
CD40-204ENST00000466205 PSCAO43653 123 aa6.85□□□□□ -1.31
CD40-204ENST00000466205 BTF3P20290 206 aaKnown RBP6.85□□□□□ -1.31
CD40-204ENST00000466205 ERVFC1-1P60608 527 aa6.85□□□□□ -1.31
CD40-204ENST00000466205 LCE2DQ5TA82 110 aaPredicted RBP6.85□□□□□ -1.31
CD40-204ENST00000466205 DAZ4Q86SG3 579 aaKnown RBP6.85□□□□□ -1.31
CD40-204ENST00000466205 C10orf126Q8N4M7 172 aa6.85□□□□□ -1.31
CD40-204ENST00000466205 DEFB104AQ8WTQ1 72 aa6.85□□□□□ -1.31
CD40-204ENST00000466205 RPP21Q9H633 154 aaKnown RBP6.85□□□□□ -1.31
CD40-204ENST00000466205 BIN3Q9NQY0 253 aa6.85□□□□□ -1.31
CD40-204ENST00000466205 DAZ3Q9NR90 486 aaKnown RBP6.85□□□□□ -1.31
CD40-204ENST00000466205 TRBV10-1A0A0K0K1A3 114 aa6.84□□□□□ -1.31
CD40-204ENST00000466205 IBA57-AS1B1ANH7 110 aa6.84□□□□□ -1.31
CD40-204ENST00000466205 UBE2D3P61077 147 aa6.84□□□□□ -1.31
CD40-204ENST00000466205 UBE2D2P62837 147 aa6.84□□□□□ -1.31
CD40-204ENST00000466205 CACNG7P62955 275 aa6.84□□□□□ -1.31
CD40-204ENST00000466205 FAM210AQ96ND0 272 aa6.84□□□□□ -1.31
CD40-204ENST00000466205 KIF25-AS1Q9Y6Z4 181 aa6.84□□□□□ -1.31
CD40-204ENST00000466205 A0A087WTM6 91 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms