RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 MYH13Q9UKX3 1938 aa1.09□□□□□ -2.24
VBP1-202ENST00000460509 NRKQ7Z2Y5 1582 aa1.08□□□□□ -2.24
VBP1-202ENST00000460509 TRAV23DV6A0A075B6W5 121 aa1.08□□□□□ -2.24
VBP1-202ENST00000460509 MCRIP1C9JLW8 97 aa1.08□□□□□ -2.24
VBP1-202ENST00000460509 IQCJQ1A5X6 159 aa1.08□□□□□ -2.24
VBP1-202ENST00000460509 Q56UQ5 140 aa1.08□□□□□ -2.24
VBP1-202ENST00000460509 NDUFA11Q86Y39 141 aa1.08□□□□□ -2.24
VBP1-202ENST00000460509 TMEM141Q96I45 108 aa1.08□□□□□ -2.24
VBP1-202ENST00000460509 ATG5Q9H1Y0 275 aa1.08□□□□□ -2.24
VBP1-202ENST00000460509 SHROOM2Q13796 1616 aa1.07□□□□□ -2.24
VBP1-202ENST00000460509 MAPKBP1O60336 1514 aa1.07□□□□□ -2.24
VBP1-202ENST00000460509 NBDYA0A0U1RRE5 68 aa1.07□□□□□ -2.24
VBP1-202ENST00000460509 TFF1P04155 84 aa1.07□□□□□ -2.24
VBP1-202ENST00000460509 SMIM6P0DI80 62 aa1.07□□□□□ -2.24
VBP1-202ENST00000460509 Q8N8P6 123 aa1.07□□□□□ -2.24
VBP1-202ENST00000460509 KTN1Q86UP2 1357 aaKnown RBP1.07□□□□□ -2.24
VBP1-202ENST00000460509 RREB1Q92766 1687 aa1.07□□□□□ -2.24
VBP1-202ENST00000460509 BLMP54132 1417 aaPredicted RBP1.06□□□□□ -2.24
VBP1-202ENST00000460509 IFT140Q96RY7 1462 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 DLEC1Q9Y238 1755 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 FREM3P0C091 2139 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 SMARCA2P51531 1590 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.06□□□□□ -2.24
VBP1-202ENST00000460509 C20orf202A1L168 122 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 HIGD1CA8MV81 97 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 SNAPC5O75971 98 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 PIPP12273 146 aaPredicted RBP1.06□□□□□ -2.24
VBP1-202ENST00000460509 TPPP2P59282 170 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 PPP3R1P63098 170 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 C9orf116Q5BN46 136 aaPredicted RBP1.06□□□□□ -2.24
VBP1-202ENST00000460509 C12orf73Q69YU5 71 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 C10orf82Q8WW14 230 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 IFI27L1Q96BM0 104 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 AMELYQ99218 206 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 RPRMQ9NS64 109 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 COA4Q9NYJ1 87 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 IER3IP1Q9Y5U9 82 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 ROBO1Q9Y6N7 1651 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 CCNB3Q8WWL7 1395 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 VPS8Q8N3P4 1428 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 MUC4Q99102 2169 aa1.06□□□□□ -2.24
VBP1-202ENST00000460509 EXPH5Q8NEV8 1989 aa1.05□□□□□ -2.24
VBP1-202ENST00000460509 SCN3AQ9NY46 2000 aa1.05□□□□□ -2.24
VBP1-202ENST00000460509 SNCGO76070 127 aa1.05□□□□□ -2.24
VBP1-202ENST00000460509 CCKP06307 115 aa1.05□□□□□ -2.24
VBP1-202ENST00000460509 NPC2P61916 151 aa1.05□□□□□ -2.24
VBP1-202ENST00000460509 CATR1Q13166 79 aa1.05□□□□□ -2.24
VBP1-202ENST00000460509 PPP3R2Q96LZ3 170 aa1.05□□□□□ -2.24
VBP1-202ENST00000460509 NCOA6Q14686 2063 aaPredicted RBP1.04□□□□□ -2.24
VBP1-202ENST00000460509 TRAV12-3A0A0B4J271 114 aa1.04□□□□□ -2.24
VBP1-202ENST00000460509 LOC101927531A0A1B0GV80 90 aa1.04□□□□□ -2.24
VBP1-202ENST00000460509 OOSP1A8MZH6 123 aa1.04□□□□□ -2.24
VBP1-202ENST00000460509 APOC4-APOC2K7ER74 178 aa1.04□□□□□ -2.24
VBP1-202ENST00000460509 APOC2P02655 101 aa1.04□□□□□ -2.24
VBP1-202ENST00000460509 CBLN1P23435 193 aa1.04□□□□□ -2.24
VBP1-202ENST00000460509 RBP2P50120 134 aa1.04□□□□□ -2.24
VBP1-202ENST00000460509 FXYD4P59646 89 aa1.04□□□□□ -2.24
VBP1-202ENST00000460509 UBE2G1P62253 170 aa1.04□□□□□ -2.24
VBP1-202ENST00000460509 INSL4Q14641 139 aa1.04□□□□□ -2.24
VBP1-202ENST00000460509 FXYD3Q14802 87 aa1.04□□□□□ -2.24
VBP1-202ENST00000460509 C9orf153Q5TBE3 101 aa1.04□□□□□ -2.24
VBP1-202ENST00000460509 XAF1Q6GPH4 301 aa1.04□□□□□ -2.24
VBP1-202ENST00000460509 MRPL54Q6P161 138 aaKnown RBP1.04□□□□□ -2.24
VBP1-202ENST00000460509 TSKUQ8WUA8 353 aa1.04□□□□□ -2.24
VBP1-202ENST00000460509 KDM6BO15054 1643 aa1.04□□□□□ -2.24
VBP1-202ENST00000460509 SPHKAPQ2M3C7 1700 aa1.03□□□□□ -2.24
VBP1-202ENST00000460509 TRBV10-3A0A0K0K1G6 114 aa1.03□□□□□ -2.24
VBP1-202ENST00000460509 TEX49A0A1B0GTD5 131 aa1.03□□□□□ -2.24
VBP1-202ENST00000460509 TCRBV3S1A0A5B6 114 aa1.03□□□□□ -2.24
VBP1-202ENST00000460509 S100A7L2Q5SY68 101 aa1.03□□□□□ -2.24
VBP1-202ENST00000460509 C5orf56Q8N8D9 126 aa1.03□□□□□ -2.24
VBP1-202ENST00000460509 DSCR8Q96T75 97 aa1.03□□□□□ -2.24
VBP1-202ENST00000460509 CPSF1Q10570 1443 aaKnown RBP1.03□□□□□ -2.24
VBP1-202ENST00000460509 CASKIN1Q8WXD9 1431 aa1.03□□□□□ -2.24
VBP1-202ENST00000460509 CNTLNQ9NXG0 1405 aa1.03□□□□□ -2.24
VBP1-202ENST00000460509 RBBP6Q7Z6E9 1792 aaKnown RBP1.03□□□□□ -2.24
VBP1-202ENST00000460509 UBE2D1P51668 147 aa1.02□□□□□ -2.25
VBP1-202ENST00000460509 EFNA4P52798 201 aa1.02□□□□□ -2.25
VBP1-202ENST00000460509 SPANXDQ9BXN6 97 aa1.02□□□□□ -2.25
VBP1-202ENST00000460509 CC2D2AQ9P2K1 1620 aa1.02□□□□□ -2.25
VBP1-202ENST00000460509 NRXN2Q9P2S2 1712 aa1.01□□□□□ -2.25
VBP1-202ENST00000460509 CLPSL1A2RUU4 121 aa1.01□□□□□ -2.25
VBP1-202ENST00000460509 IFNA17P01571 189 aa1.01□□□□□ -2.25
VBP1-202ENST00000460509 CCL8P80075 99 aa1.01□□□□□ -2.25
VBP1-202ENST00000460509 HSD52Q0P140 79 aa1.01□□□□□ -2.25
VBP1-202ENST00000460509 RPL7L1Q6DKI1 246 aaKnown RBP1.01□□□□□ -2.25
VBP1-202ENST00000460509 LINC00575Q6W349 94 aa1.01□□□□□ -2.25
VBP1-202ENST00000460509 Q6ZQY7 126 aa1.01□□□□□ -2.25
VBP1-202ENST00000460509 CYP2G1PQ6ZSU1 146 aa1.01□□□□□ -2.25
VBP1-202ENST00000460509 CCL19Q99731 98 aa1.01□□□□□ -2.25
VBP1-202ENST00000460509 NWD2Q9ULI1 1742 aa1.01□□□□□ -2.25
VBP1-202ENST00000460509 PXDNQ92626 1479 aa1□□□□□ -2.25
VBP1-202ENST00000460509 TNRC6AQ8NDV7 1962 aaKnown RBP1□□□□□ -2.25
VBP1-202ENST00000460509 NCR3O14931 201 aa1□□□□□ -2.25
VBP1-202ENST00000460509 CCL3L1P16619 93 aa1□□□□□ -2.25
VBP1-202ENST00000460509 RBM3P98179 157 aaKnown RBP1□□□□□ -2.25
VBP1-202ENST00000460509 GTF2H5Q6ZYL4 71 aa1□□□□□ -2.25
VBP1-202ENST00000460509 C5orf38Q86SI9 138 aa1□□□□□ -2.25
VBP1-202ENST00000460509 C8orf59Q8N0T1 100 aaPredicted RBP1□□□□□ -2.25
VBP1-202ENST00000460509 SPTSSBQ8NFR3 76 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms