RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 GNG11P61952 73 aa1.96□□□□□ -2.1
VPS8-215ENST00000460158 SEC11AP67812 179 aa1.96□□□□□ -2.1
VPS8-215ENST00000460158 EIF4EBP1Q13541 118 aaPredicted RBP1.96□□□□□ -2.1
VPS8-215ENST00000460158 ZNF345Q14585 488 aa1.96□□□□□ -2.1
VPS8-215ENST00000460158 RHOHQ15669 191 aa1.96□□□□□ -2.1
VPS8-215ENST00000460158 LYPD6Q86Y78 171 aa1.96□□□□□ -2.1
VPS8-215ENST00000460158 LINC00269Q8N2A0 174 aa1.96□□□□□ -2.1
VPS8-215ENST00000460158 OR8B3Q8NGG8 313 aa1.96□□□□□ -2.1
VPS8-215ENST00000460158 OR10AG1Q8NH19 301 aa1.96□□□□□ -2.1
VPS8-215ENST00000460158 PPDPFLQ8WWR9 84 aa1.96□□□□□ -2.1
VPS8-215ENST00000460158 TSLPQ969D9 159 aa1.96□□□□□ -2.1
VPS8-215ENST00000460158 C20orf78Q9BR46 151 aa1.96□□□□□ -2.1
VPS8-215ENST00000460158 SPCS1Q9Y6A9 102 aa1.96□□□□□ -2.1
VPS8-215ENST00000460158 MAGI3Q5TCQ9 1506 aa1.96□□□□□ -2.1
VPS8-215ENST00000460158 UGGT2Q9NYU1 1516 aa1.96□□□□□ -2.1
VPS8-215ENST00000460158 BTAF1O14981 1849 aa1.96□□□□□ -2.1
VPS8-215ENST00000460158 MPDZO75970 2070 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 RGPD2P0DJD1 1756 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 GOLGA3Q08378 1498 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 IGLV10-54A0A075B6I4 117 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 IGKV2-28A0A075B6P5 120 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 TRAV10A0A0B4J240 114 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 CRYM-AS1A6NIL9 109 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 E7EUB6 86 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 H3BRM9 83 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 PSCAO43653 123 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 IGKV2D-28P01615 120 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 UBE2G1P62253 170 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 CCL8P80075 99 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 ERHP84090 104 aaKnown RBP1.95□□□□□ -2.1
VPS8-215ENST00000460158 Q1T7F1 81 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 LINC00483Q53H64 154 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 Q5BKY6 102 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 SLC48A1Q6P1K1 146 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 C2orf82Q6UX34 121 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 C20orf166-AS1Q96NR2 134 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 HIGD2AQ9BW72 106 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
VPS8-215ENST00000460158 MRPL35Q9NZE8 188 aaKnown RBP1.95□□□□□ -2.1
VPS8-215ENST00000460158 PRDM15P57071 1507 aaPredicted RBP1.95□□□□□ -2.1
VPS8-215ENST00000460158 MAP2P11137 1827 aaKnown RBP1.94□□□□□ -2.1
VPS8-215ENST00000460158 HEATR5BQ9P2D3 2071 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 ANKARQ7Z5J8 1434 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 CEP192Q8TEP8 1941 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 TRBV10-3A0A0K0K1G6 114 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 TCRBV4S1A1TA0A5B7 111 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 IBA57-AS1B1ANH7 110 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 CCKP06307 115 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 ASAH2BP0C7U1 165 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 RNASE2P10153 161 aaKnown RBP1.94□□□□□ -2.1
VPS8-215ENST00000460158 PRB4P10163 310 aaPredicted RBP1.94□□□□□ -2.1
VPS8-215ENST00000460158 MIFP14174 115 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 KRTAP25-1Q3LHN0 102 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 SPTSSBQ8NFR3 76 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 CMTM2Q8TAZ6 248 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 ZNF431Q8TF32 576 aaPredicted RBP1.94□□□□□ -2.1
VPS8-215ENST00000460158 TRGV9Q99603 122 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 S4R3C0 116 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 ARFGEF2Q9Y6D5 1785 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 TMEM131LA2VDJ0 1609 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 KDM6BO15054 1643 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 GBF1Q92538 1859 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 SHANK2Q9UPX8 1470 aa1.94□□□□□ -2.1
VPS8-215ENST00000460158 ABCA8O94911 1581 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 STRCP1A6NGW2 1772 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 TOP2BQ02880 1626 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 IGLV4-60A0A075B6I1 120 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 IGKV1D-17A0A075B6S4 117 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 IGHV3OR16-8A0A075B7F1 116 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 A0A087WSZ3 146 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 TRAV13-2A0A0B4J235 113 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 LRCOL1A6NCL2 159 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 NDUFC1O43677 76 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 NUPR1O60356 82 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 CXCL8P10145 99 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 MIR22HGQ0VDD5 57 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 HMGN3Q15651 99 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 C9orf116Q5BN46 136 aaPredicted RBP1.93□□□□□ -2.1
VPS8-215ENST00000460158 SPINT4Q6UDR6 99 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 SERP2Q8N6R1 65 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 SCRT1Q9BWW7 348 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 NDUFB11Q9NX14 153 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 CACFD1Q9UGQ2 172 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 CACNA1DQ01668 2161 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 CDK12Q9NYV4 1490 aaPredicted RBP1.93□□□□□ -2.1
VPS8-215ENST00000460158 CFAP74Q9C0B2 1584 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 FREM3P0C091 2139 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 ESPL1Q14674 2120 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 KDM3BQ7LBC6 1761 aa1.93□□□□□ -2.1
VPS8-215ENST00000460158 HFM1A2PYH4 1435 aa1.92□□□□□ -2.1
VPS8-215ENST00000460158 SLIT3O75094 1523 aa1.92□□□□□ -2.1
VPS8-215ENST00000460158 DISP1Q96F81 1524 aa1.92□□□□□ -2.1
VPS8-215ENST00000460158 AFDNP55196 1824 aaKnown RBP1.92□□□□□ -2.1
VPS8-215ENST00000460158 A0A1W2PPM0 123 aa1.92□□□□□ -2.1
VPS8-215ENST00000460158 KANTRA0A1W2PQU2 76 aa1.92□□□□□ -2.1
VPS8-215ENST00000460158 CFDP00746 253 aaPredicted RBP1.92□□□□□ -2.1
VPS8-215ENST00000460158 IGLC2P0DOY2 106 aa1.92□□□□□ -2.1
VPS8-215ENST00000460158 IGLC3P0DOY3 106 aa1.92□□□□□ -2.1
VPS8-215ENST00000460158 SPTBP11277 2137 aa1.92□□□□□ -2.1
VPS8-215ENST00000460158 MPV17LQ2QL34 196 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms