RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 PLCE1Q9P212 2302 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 ZNF142P52746 1687 aaPredicted RBP-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 MYO7BQ6PIF6 2116 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 USP9YO00507 2555 aaPredicted RBP-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 MXRA5Q9NR99 2828 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 ATRQ13535 2644 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 GVINP1Q7Z2Y8 2422 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 TRAV1-2A0A0B4J238 106 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 TRAV13-1A0A0B4J241 112 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 TRBV10-3A0A0K0K1G6 114 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 LOC107984640A0A0U1RRK4 108 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 DEGS1O15121 323 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 HBDP02042 147 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 APOC1P02654 83 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 S100A11P31949 105 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 CKS2P33552 79 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 SPA17Q15506 151 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 PTRHD1Q6GMV3 140 aaKnown RBP-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 SLC48A1Q6P1K1 146 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 CYP2G1PQ6ZSU1 146 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 SMIM20Q8N5G0 67 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 PPP1R1CQ8WVI7 109 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 GINS3Q9BRX5 216 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 CBLN4Q9NTU7 201 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 ARL2BPQ9Y2Y0 163 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 V9GYV3 84 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 PHIPQ8WWQ0 1821 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 KIF13AQ9H1H9 1805 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 ARFGEF1Q9Y6D6 1849 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 EPG5Q9HCE0 2579 aa-0.71□□□□□ -2.52
SNHG3-203ENST00000447507 MUC17Q685J3 4493 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 HECTD1Q9ULT8 2610 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 H3BMG7 143 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 I3L2K1 104 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 M0R2T5 61 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 NIPSNAP2O75323 286 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 SLC25A5P05141 298 aaKnown RBP-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 CTXN2P0C2S0 81 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 SPRR1BP22528 89 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 AKR1D1P51857 326 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 PCBD1P61457 104 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 TMED2Q15363 201 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 C3orf33Q6P1S2 294 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 DHRS4L2Q6PKH6 230 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 SLC25A26Q70HW3 274 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 CROCCP2Q86T23 111 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 BRK1Q8WUW1 75 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 LAMTOR3Q9UHA4 124 aa-0.72□□□□□ -2.52
SNHG3-203ENST00000447507 PKD1P98161 4303 aa-0.72□□□□□ -2.53
SNHG3-203ENST00000447507 USP9XQ93008 2570 aaPredicted RBP-0.72□□□□□ -2.53
SNHG3-203ENST00000447507 CHD8Q9HCK8 2581 aa-0.72□□□□□ -2.53
SNHG3-203ENST00000447507 NRXN2Q9P2S2 1712 aa-0.72□□□□□ -2.53
SNHG3-203ENST00000447507 IFT172Q9UG01 1749 aa-0.72□□□□□ -2.53
SNHG3-203ENST00000447507 AKAP9Q99996 3911 aa-0.72□□□□□ -2.53
SNHG3-203ENST00000447507 VPS13DQ5THJ4 4388 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 TSC2P49815 1807 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 FER1L6Q2WGJ9 1857 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 MYH3P11055 1940 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 KDM5CP41229 1560 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 LRP6O75581 1613 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 TRAV12-3A0A0B4J271 114 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 CLPSL1A2RUU4 121 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 MAP1LC3B2A6NCE7 125 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 IFNA21P01568 189 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 GNG3P63215 75 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 SSBP1Q04837 148 aaKnown RBP-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 OR8B8Q15620 311 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 KLK9Q2XQG4 91 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 DYDC1Q8WWB3 177 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 PPDPFLQ8WWR9 84 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 AP3S1Q92572 193 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 TP53AIP1Q9HCN2 124 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 SCN3BQ9NY72 215 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 NUBP2Q9Y5Y2 271 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 MUC22E2RYF6 1773 aaPredicted RBP-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 SIPA1L3O60292 1781 aaPredicted RBP-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 ARHGAP31Q2M1Z3 1444 aa-0.73□□□□□ -2.53
SNHG3-203ENST00000447507 SPTA1P02549 2419 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 LAMA2P24043 3122 aaKnown RBP-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 IFNA1P01562 189 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 TCRAP04437 139 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 EDDM3BP56851 147 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 FAM24BQ8N5W8 94 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 OR13C6PQ8NH95 151 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 CFAP53Q96M91 514 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 WFDC6Q9BQY6 131 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 FXYD6Q9H0Q3 95 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 NPVFQ9HCQ7 196 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 TRAPPC2LQ9UL33 140 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 SPCS1Q9Y6A9 102 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 PCNX1Q96RV3 2341 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 CCDC171Q6TFL3 1326 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 IBTKQ9P2D0 1353 aaPredicted RBP-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 IQSEC2Q5JU85 1478 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 BICRAQ9NZM4 1560 aa-0.74□□□□□ -2.53
SNHG3-203ENST00000447507 TRBV7-6A0A0J9YX20 115 aa-0.75□□□□□ -2.53
SNHG3-203ENST00000447507 RPL7P18124 248 aaKnown RBP-0.75□□□□□ -2.53
SNHG3-203ENST00000447507 HSD11B1P28845 292 aa-0.75□□□□□ -2.53
SNHG3-203ENST00000447507 SPCS2Q15005 226 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms