RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 NACAE9PAV3 2078 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 INS-IGF2F8WCM5 200 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 PATE4P0C8F1 98 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 ZNF22P17026 224 aaPredicted RBP2.17□□□□□ -2.06
LIG4-203ENST00000442234 CRIP2P52943 208 aaPredicted RBP2.17□□□□□ -2.06
LIG4-203ENST00000442234 FGF12P61328 243 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 CCL8P80075 99 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 MSMPQ1L6U9 139 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 KRTAP24-1Q3LI83 254 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 RNF182Q8N6D2 247 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 ZNF492Q9P255 531 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 GNG12Q9UBI6 72 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 EML6Q6ZMW3 1958 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 IGKV1-27A0A075B6S5 117 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 TRAV12-2A0A075B6T6 113 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 IGHV3-43A0A0B4J1X8 118 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 FAM90A7PA6NKC0 464 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 FAM90A22PA8MWA6 464 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 FAM90A12PA8MX19 464 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 FAM90A23PA8MXZ1 464 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 MS4A18H0YCH9 400 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 DNAL4O96015 105 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 FAM90A15PP0C7V4 464 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 FAM90A13PP0C7W8 464 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 FAM90A14PP0C7W9 464 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 IGHV3-43DP0DP04 118 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 LGALS3P17931 250 aaKnown RBP2.17□□□□□ -2.06
LIG4-203ENST00000442234 ORMDL2Q53FV1 153 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 Q5XG85 94 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 STHQ8IWL8 128 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 SERP2Q8N6R1 65 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 EEF1AKMT3Q96AZ1 226 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 PLEKHB2Q96CS7 222 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 FMC1Q96HJ9 113 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 METTL26Q96S19 204 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 DNAH6Q9C0G6 4158 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 PRKDCP78527 4128 aaKnown RBP2.16□□□□□ -2.06
LIG4-203ENST00000442234 SMIM26A0A096LP01 95 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 IGHV1-45A0A0A0MS14 117 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 RBMY1BA6NDE4 496 aaKnown RBP2.16□□□□□ -2.06
LIG4-203ENST00000442234 RBMY1EA6NEQ0 496 aaKnown RBP2.16□□□□□ -2.06
LIG4-203ENST00000442234 DEFB108AA8MXU0 73 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 H3BT86 120 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 SPRY3O43610 288 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 RBMY1DP0C7P1 496 aaKnown RBP2.16□□□□□ -2.06
LIG4-203ENST00000442234 RBMY1A1P0DJD3 496 aaKnown RBP2.16□□□□□ -2.06
LIG4-203ENST00000442234 RBMY1CP0DJD4 496 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 RBMY1FQ15415 496 aaKnown RBP2.16□□□□□ -2.06
LIG4-203ENST00000442234 FAM104BQ5XKR9 115 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 BRD3OSQ6XYD6 125 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 LINC00596Q86U02 117 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 VKORC1L1Q8N0U8 176 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 LINC00311Q8N616 119 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 RFESDQ8TAC1 157 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 PIFOQ8TCI5 191 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 SCGB3A1Q96QR1 104 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 PLXNB1O43157 2135 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.16□□□□□ -2.06
LIG4-203ENST00000442234 FAM240AA0A1B0GVK7 77 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 F8VRH5 84 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 NGFP01138 241 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 RPL18AQ02543 176 aaKnown RBP2.16□□□□□ -2.06
LIG4-203ENST00000442234 RHOHQ15669 191 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 MRPL51Q4U2R6 128 aaKnown RBP2.16□□□□□ -2.06
LIG4-203ENST00000442234 ZNF329Q86UD4 541 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 CXorf67Q86X51 503 aaPredicted RBP2.16□□□□□ -2.06
LIG4-203ENST00000442234 LINC01561Q8N1V8 128 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 C20orf197Q8N268 126 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 BPESC1Q9GZL8 116 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 DPH3P1Q9H4G8 78 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 SPRR3Q9UBC9 169 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 FRAS1Q86XX4 4008 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 COL5A1P20908 1838 aaPredicted RBP2.16□□□□□ -2.06
LIG4-203ENST00000442234 A0A096LNJ9 63 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 A0A0B4J2C4 111 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 IGKV3D-7A0A0C4DH55 119 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 TMEM178BH3BS89 294 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 TIMM17BO60830 172 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 COL8A2P25067 703 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 PLGLAQ15195 96 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 LYZL1Q6UWQ5 148 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 SBSPONQ8IVN8 264 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 MPLKIPQ8TAP9 179 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 RNASE6Q93091 150 aaKnown RBP2.16□□□□□ -2.06
LIG4-203ENST00000442234 OTORQ9NRC9 128 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 TP53TG1Q9Y2A0 90 aa2.16□□□□□ -2.06
LIG4-203ENST00000442234 IQCF6A8MYZ5 107 aa2.15□□□□□ -2.06
LIG4-203ENST00000442234 NDUFC2-KCTD14E9PQ53 114 aa2.15□□□□□ -2.06
LIG4-203ENST00000442234 FOXS1O43638 330 aa2.15□□□□□ -2.06
LIG4-203ENST00000442234 IGHG3P01860 377 aa2.15□□□□□ -2.06
LIG4-203ENST00000442234 UBE2D1P51668 147 aa2.15□□□□□ -2.06
LIG4-203ENST00000442234 SUB1P53999 127 aaKnown RBP eCLIP2.15□□□□□ -2.06
LIG4-203ENST00000442234 HOXA4Q00056 320 aaPredicted RBP2.15□□□□□ -2.06
LIG4-203ENST00000442234 BSPH1Q075Z2 132 aa2.15□□□□□ -2.06
LIG4-203ENST00000442234 LINC00305Q7Z4B0 112 aa2.15□□□□□ -2.06
LIG4-203ENST00000442234 MDS2Q8NDY4 140 aa2.15□□□□□ -2.06
LIG4-203ENST00000442234 SERP1Q9Y6X1 66 aa2.15□□□□□ -2.06
LIG4-203ENST00000442234 A0A1W2PPR1 153 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 WNT9BO14905 357 aa2.15□□□□□ -2.07
LIG4-203ENST00000442234 IGHG2P01859 326 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms