RNA–Protein interactions for RNA: ENST00000440919.1

SATB2-204, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best)

Gene SATB2, Length 2,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-204ENST00000440919 MAP1AP78559 2803 aaPredicted RBP13.15□□□□□ -0.3
SATB2-204ENST00000440919 TRAV12-3A0A0B4J271 114 aa13.14□□□□□ -0.31
SATB2-204ENST00000440919 HOXA3O43365 443 aaPredicted RBP13.14□□□□□ -0.31
SATB2-204ENST00000440919 MSMBP08118 114 aa13.14□□□□□ -0.31
SATB2-204ENST00000440919 CD300EQ496F6 205 aaPredicted RBP13.14□□□□□ -0.31
SATB2-204ENST00000440919 SAMD13Q5VXD3 122 aa13.14□□□□□ -0.31
SATB2-204ENST00000440919 VCYO14598 125 aa13.14□□□□□ -0.31
SATB2-204ENST00000440919 RPL39P62891 51 aaKnown RBP13.14□□□□□ -0.31
SATB2-204ENST00000440919 SCGB1D4Q6XE38 83 aa13.14□□□□□ -0.31
SATB2-204ENST00000440919 DEFB104AQ8WTQ1 72 aa13.14□□□□□ -0.31
SATB2-204ENST00000440919 DSCR9P59020 149 aa13.13□□□□□ -0.31
SATB2-204ENST00000440919 PMVKQ15126 192 aa13.13□□□□□ -0.31
SATB2-204ENST00000440919 TMEM95Q3KNT9 176 aa13.13□□□□□ -0.31
SATB2-204ENST00000440919 PAPPA-AS1Q5QFB9 102 aa13.13□□□□□ -0.31
SATB2-204ENST00000440919 KLHL30-AS1Q8NEE0 82 aa13.13□□□□□ -0.31
SATB2-204ENST00000440919 KIR2DL4Q99706 377 aa13.13□□□□□ -0.31
SATB2-204ENST00000440919 PRO0461Q9UI25 63 aa13.13□□□□□ -0.31
SATB2-204ENST00000440919 LGALS9O00182 355 aa13.13□□□□□ -0.31
SATB2-204ENST00000440919 EMP1P54849 157 aa13.13□□□□□ -0.31
SATB2-204ENST00000440919 TMEM141Q96I45 108 aa13.13□□□□□ -0.31
SATB2-204ENST00000440919 TIMM17AQ99595 171 aa13.13□□□□□ -0.31
SATB2-204ENST00000440919 MYO18BQ8IUG5 2567 aa13.12□□□□□ -0.31
SATB2-204ENST00000440919 CRYBG3Q68DQ2 2970 aa13.12□□□□□ -0.31
SATB2-204ENST00000440919 TRBV27A0A0K0K1C4 114 aa13.12□□□□□ -0.31
SATB2-204ENST00000440919 SDHAF1A6NFY7 115 aa13.12□□□□□ -0.31
SATB2-204ENST00000440919 F5H697 171 aa13.12□□□□□ -0.31
SATB2-204ENST00000440919 AVPP01185 164 aa13.12□□□□□ -0.31
SATB2-204ENST00000440919 PGPEP1Q9NXJ5 209 aa13.12□□□□□ -0.31
SATB2-204ENST00000440919 ZFYVE26Q68DK2 2539 aa13.12□□□□□ -0.31
SATB2-204ENST00000440919 ZNF462Q96JM2 2506 aa13.12□□□□□ -0.31
SATB2-204ENST00000440919 TMEM238LA0A1B0GVL6 79 aa13.11□□□□□ -0.31
SATB2-204ENST00000440919 A6NJY4 79 aa13.11□□□□□ -0.31
SATB2-204ENST00000440919 PSMB8P28062 276 aa13.11□□□□□ -0.31
SATB2-204ENST00000440919 UBE2D1P51668 147 aa13.11□□□□□ -0.31
SATB2-204ENST00000440919 GAGE13Q4V321 117 aa13.11□□□□□ -0.31
SATB2-204ENST00000440919 C9orf85Q96MD7 179 aa13.11□□□□□ -0.31
SATB2-204ENST00000440919 ZNF580Q9UK33 172 aa13.11□□□□□ -0.31
SATB2-204ENST00000440919 IGHV3-16A0A0C4DH30 117 aa13.11□□□□□ -0.31
SATB2-204ENST00000440919 TRBV6-5A0A0K0K1A5 114 aa13.11□□□□□ -0.31
SATB2-204ENST00000440919 HERVK_113P61574 105 aa13.11□□□□□ -0.31
SATB2-204ENST00000440919 SH2D6Q7Z4S9 175 aa13.11□□□□□ -0.31
SATB2-204ENST00000440919 NRGNQ92686 78 aa13.11□□□□□ -0.31
SATB2-204ENST00000440919 ODF3Q96PU9 254 aa13.11□□□□□ -0.31
SATB2-204ENST00000440919 SRSF9Q13242 221 aaKnown RBP eCLIP13.1□□□□□ -0.31
SATB2-204ENST00000440919 ETDBQ3ZM63 59 aa13.1□□□□□ -0.31
SATB2-204ENST00000440919 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.1□□□□□ -0.31
SATB2-204ENST00000440919 TMEM238C9JI98 176 aa13.1□□□□□ -0.31
SATB2-204ENST00000440919 ZNF688P0C7X2 276 aa13.1□□□□□ -0.31
SATB2-204ENST00000440919 MTURNQ8N3F0 131 aa13.1□□□□□ -0.31
SATB2-204ENST00000440919 MRPL16Q9NX20 251 aaKnown RBP13.1□□□□□ -0.31
SATB2-204ENST00000440919 FAM74A4Q5TZK3 123 aa13.09□□□□□ -0.31
SATB2-204ENST00000440919 MDFICQ9P1T7 246 aa13.09□□□□□ -0.31
SATB2-204ENST00000440919 TRAV12-2A0A075B6T6 113 aa13.08□□□□□ -0.31
SATB2-204ENST00000440919 A0A0J9YX75 114 aa13.08□□□□□ -0.31
SATB2-204ENST00000440919 A0A0J9YY99 117 aa13.08□□□□□ -0.31
SATB2-204ENST00000440919 ZNF876PQ49A33 203 aa13.08□□□□□ -0.31
SATB2-204ENST00000440919 ZNRF2Q8NHG8 242 aa13.08□□□□□ -0.31
SATB2-204ENST00000440919 SPG11Q96JI7 2443 aa13.08□□□□□ -0.31
SATB2-204ENST00000440919 TSPEAR-AS2P59090 65 aa13.08□□□□□ -0.32
SATB2-204ENST00000440919 C10orf99Q6UWK7 81 aa13.08□□□□□ -0.32
SATB2-204ENST00000440919 J3QR89 54 aa13.07□□□□□ -0.32
SATB2-204ENST00000440919 UBR5O95071 2799 aaPredicted RBP13.07□□□□□ -0.32
SATB2-204ENST00000440919 B4DSR2 109 aa13.07□□□□□ -0.32
SATB2-204ENST00000440919 M0QY20 66 aa13.07□□□□□ -0.32
SATB2-204ENST00000440919 IGKV3-20P01619 116 aa13.07□□□□□ -0.32
SATB2-204ENST00000440919 Q8N1Y9 231 aa13.07□□□□□ -0.32
SATB2-204ENST00000440919 SPAG8Q99932 426 aaPredicted RBP13.07□□□□□ -0.32
SATB2-204ENST00000440919 TSSC4Q9Y5U2 329 aaPredicted RBP13.07□□□□□ -0.32
SATB2-204ENST00000440919 CSPG4Q6UVK1 2322 aa13.06□□□□□ -0.32
SATB2-204ENST00000440919 TSPAN13O95857 204 aa13.06□□□□□ -0.32
SATB2-204ENST00000440919 SNRPD3P62318 126 aaKnown RBP13.06□□□□□ -0.32
SATB2-204ENST00000440919 ZNF56Q15929 161 aa13.06□□□□□ -0.32
SATB2-204ENST00000440919 TMEM170BQ5T4T1 132 aa13.06□□□□□ -0.32
SATB2-204ENST00000440919 SYT8Q8NBV8 401 aa13.06□□□□□ -0.32
SATB2-204ENST00000440919 ZNF256Q9Y2P7 627 aaPredicted RBP13.06□□□□□ -0.32
SATB2-204ENST00000440919 K7EQG2 157 aa13.05□□□□□ -0.32
SATB2-204ENST00000440919 IGHV4-59P01825 116 aa13.05□□□□□ -0.32
SATB2-204ENST00000440919 NSUN5P1Q3KNT7 163 aa13.05□□□□□ -0.32
SATB2-204ENST00000440919 UTP20O75691 2785 aaKnown RBP13.05□□□□□ -0.32
SATB2-204ENST00000440919 IGHV1OR15-1A0A075B7D0 117 aa13.04□□□□□ -0.32
SATB2-204ENST00000440919 DLX4Q92988 240 aaPredicted RBP13.04□□□□□ -0.32
SATB2-204ENST00000440919 AMELXQ99217 191 aa13.04□□□□□ -0.32
SATB2-204ENST00000440919 GAGE12HA6NDE8 117 aa13.04□□□□□ -0.32
SATB2-204ENST00000440919 GATA3P23771 443 aa13.04□□□□□ -0.32
SATB2-204ENST00000440919 RHOHQ15669 191 aa13.04□□□□□ -0.32
SATB2-204ENST00000440919 SPINK13Q1W4C9 94 aa13.04□□□□□ -0.32
SATB2-204ENST00000440919 CFAP126Q5VTH2 177 aa13.04□□□□□ -0.32
SATB2-204ENST00000440919 APOMO95445 188 aa13.03□□□□□ -0.32
SATB2-204ENST00000440919 IGHV3-30P01768 117 aa13.03□□□□□ -0.32
SATB2-204ENST00000440919 IGHV3-30-5P0DP03 117 aa13.03□□□□□ -0.32
SATB2-204ENST00000440919 UBE2D3P61077 147 aa13.03□□□□□ -0.32
SATB2-204ENST00000440919 UBE2D2P62837 147 aa13.03□□□□□ -0.32
SATB2-204ENST00000440919 DEFB112Q30KQ8 113 aa13.03□□□□□ -0.32
SATB2-204ENST00000440919 TRPT1Q86TN4 253 aaKnown RBP13.03□□□□□ -0.32
SATB2-204ENST00000440919 NFE4Q86UQ8 179 aa13.03□□□□□ -0.32
SATB2-204ENST00000440919 NDUFA11Q86Y39 141 aa13.03□□□□□ -0.32
SATB2-204ENST00000440919 SLC25A29Q8N8R3 303 aa13.03□□□□□ -0.32
SATB2-204ENST00000440919 SPATA25Q9BR10 227 aa13.03□□□□□ -0.32
SATB2-204ENST00000440919 GTSF1LQ9H1H1 148 aa13.03□□□□□ -0.32
SATB2-204ENST00000440919 TMEM89A2RUT3 159 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms