RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 TLN2Q9Y4G6 2542 aa10.12□□□□□ -0.79
HERPUD1-204ENST00000439977 MYO9AB2RTY4 2548 aa10.12□□□□□ -0.79
HERPUD1-204ENST00000439977 TRAV12-1A0A0B4J245 112 aa10.12□□□□□ -0.79
HERPUD1-204ENST00000439977 SPINK13Q1W4C9 94 aa10.12□□□□□ -0.79
HERPUD1-204ENST00000439977 KIF25-AS1Q9Y6Z4 181 aa10.12□□□□□ -0.79
HERPUD1-204ENST00000439977 PTPN13Q12923 2485 aa10.12□□□□□ -0.79
HERPUD1-204ENST00000439977 TEX48A0A1B0GUV7 120 aa10.12□□□□□ -0.79
HERPUD1-204ENST00000439977 ZNF815PA8K554 130 aa10.12□□□□□ -0.79
HERPUD1-204ENST00000439977 TSHBP01222 138 aa10.12□□□□□ -0.79
HERPUD1-204ENST00000439977 CRYGDP07320 174 aa10.12□□□□□ -0.79
HERPUD1-204ENST00000439977 WFDC2Q14508 124 aa10.12□□□□□ -0.79
HERPUD1-204ENST00000439977 HIST2H2BDQ6DRA6 164 aa10.12□□□□□ -0.79
HERPUD1-204ENST00000439977 OPRPNQ99935 248 aaPredicted RBP10.12□□□□□ -0.79
HERPUD1-204ENST00000439977 KLLNB2CW77 178 aa10.11□□□□□ -0.79
HERPUD1-204ENST00000439977 G3V4G9 280 aa10.11□□□□□ -0.79
HERPUD1-204ENST00000439977 LGALS1P09382 135 aaKnown RBP10.11□□□□□ -0.79
HERPUD1-204ENST00000439977 SYNJ2BPP57105 145 aa10.11□□□□□ -0.79
HERPUD1-204ENST00000439977 SDHAF1A6NFY7 115 aa10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 C11orf86A6NJI1 115 aa10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 H3BUA1 57 aa10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 ID1P41134 155 aa10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 COTL1Q14019 142 aa10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 ANKRD17O75179 2603 aaKnown RBP10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 TRBV7-3A0A075B6L6 115 aa10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 PRM2P04554 102 aa10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 ZFP2Q6ZN57 461 aa10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 APRG1Q8IVJ8 170 aa10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 B4DSR2 109 aa10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 E9PLD3 99 aa10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 CFHR3Q02985 330 aa10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 SRSF9Q13242 221 aaKnown RBP eCLIP10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 SH2D6Q7Z4S9 175 aa10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 Q8N1Y9 231 aa10.1□□□□□ -0.79
HERPUD1-204ENST00000439977 PSMB8P28062 276 aa10.09□□□□□ -0.79
HERPUD1-204ENST00000439977 ZNF56Q15929 161 aa10.09□□□□□ -0.79
HERPUD1-204ENST00000439977 ZNF462Q96JM2 2506 aa10.09□□□□□ -0.79
HERPUD1-204ENST00000439977 NDUFS8O00217 210 aa10.09□□□□□ -0.79
HERPUD1-204ENST00000439977 TMEM170BQ5T4T1 132 aa10.09□□□□□ -0.79
HERPUD1-204ENST00000439977 TGFAP01135 160 aa10.08□□□□□ -0.8
HERPUD1-204ENST00000439977 FOXI2Q6ZQN5 318 aa10.08□□□□□ -0.8
HERPUD1-204ENST00000439977 KIR2DL4Q99706 377 aa10.08□□□□□ -0.8
HERPUD1-204ENST00000439977 TEX15Q9BXT5 2789 aa10.08□□□□□ -0.8
HERPUD1-204ENST00000439977 IGHV3-73A0A0B4J1V6 119 aa10.08□□□□□ -0.8
HERPUD1-204ENST00000439977 POLR2KP53803 58 aaKnown RBP10.07□□□□□ -0.8
HERPUD1-204ENST00000439977 ETDBQ3ZM63 59 aa10.07□□□□□ -0.8
HERPUD1-204ENST00000439977 IGLV4-69A0A075B6H9 119 aa10.07□□□□□ -0.8
HERPUD1-204ENST00000439977 IGHV3-64A0A075B6Q5 118 aa10.07□□□□□ -0.8
HERPUD1-204ENST00000439977 IGIPA6NJ69 53 aa10.07□□□□□ -0.8
HERPUD1-204ENST00000439977 MED14OSP0DP75 135 aa10.07□□□□□ -0.8
HERPUD1-204ENST00000439977 NAV2Q8IVL1 2488 aa10.07□□□□□ -0.8
HERPUD1-204ENST00000439977 APOMO95445 188 aa10.06□□□□□ -0.8
HERPUD1-204ENST00000439977 DEFB136Q30KP8 78 aa10.06□□□□□ -0.8
HERPUD1-204ENST00000439977 PGPEP1Q9NXJ5 209 aa10.06□□□□□ -0.8
HERPUD1-204ENST00000439977 SETD2Q9BYW2 2564 aaPredicted RBP10.06□□□□□ -0.8
HERPUD1-204ENST00000439977 NOTCH3Q9UM47 2321 aa10.06□□□□□ -0.8
HERPUD1-204ENST00000439977 IGHV3-16A0A0C4DH30 117 aa10.06□□□□□ -0.8
HERPUD1-204ENST00000439977 VCYO14598 125 aa10.06□□□□□ -0.8
HERPUD1-204ENST00000439977 K7EMT4 169 aa10.06□□□□□ -0.8
HERPUD1-204ENST00000439977 HOXA3O43365 443 aaPredicted RBP10.06□□□□□ -0.8
HERPUD1-204ENST00000439977 SNRPD3P62318 126 aaKnown RBP10.06□□□□□ -0.8
HERPUD1-204ENST00000439977 TAL2Q16559 108 aa10.06□□□□□ -0.8
HERPUD1-204ENST00000439977 MRPL16Q9NX20 251 aaKnown RBP10.06□□□□□ -0.8
HERPUD1-204ENST00000439977 SONP18583 2426 aaKnown RBP10.05□□□□□ -0.8
HERPUD1-204ENST00000439977 IGHV4OR15-8A0A075B7B6 117 aa10.05□□□□□ -0.8
HERPUD1-204ENST00000439977 A0A087WW49 117 aa10.05□□□□□ -0.8
HERPUD1-204ENST00000439977 A0A0J9YX75 114 aa10.05□□□□□ -0.8
HERPUD1-204ENST00000439977 LINC01549A6NIU2 74 aa10.05□□□□□ -0.8
HERPUD1-204ENST00000439977 NXPH4O95158 308 aa10.05□□□□□ -0.8
HERPUD1-204ENST00000439977 PPP1R17O96001 155 aa10.05□□□□□ -0.8
HERPUD1-204ENST00000439977 TSPEAR-AS2P59090 65 aa10.05□□□□□ -0.8
HERPUD1-204ENST00000439977 RRN3P1Q2M238 152 aa10.05□□□□□ -0.8
HERPUD1-204ENST00000439977 ZNRF2Q8NHG8 242 aa10.05□□□□□ -0.8
HERPUD1-204ENST00000439977 DUX3Q96PT4 197 aa10.05□□□□□ -0.8
HERPUD1-204ENST00000439977 BRI3O95415 125 aa10.05□□□□□ -0.8
HERPUD1-204ENST00000439977 ZNF876PQ49A33 203 aa10.05□□□□□ -0.8
HERPUD1-204ENST00000439977 MORN3Q6PF18 240 aaPredicted RBP10.05□□□□□ -0.8
HERPUD1-204ENST00000439977 C18orf65Q6ZTR6 163 aa10.05□□□□□ -0.8
HERPUD1-204ENST00000439977 PMVKQ15126 192 aa10.04□□□□□ -0.8
HERPUD1-204ENST00000439977 BEX4Q9NWD9 120 aaPredicted RBP10.04□□□□□ -0.8
HERPUD1-204ENST00000439977 LOC107984156A0A0G2JMH3 177 aa10.04□□□□□ -0.8
HERPUD1-204ENST00000439977 TRBV7-9A0A0J9YWB2 115 aa10.04□□□□□ -0.8
HERPUD1-204ENST00000439977 PRB1P04280 392 aa10.04□□□□□ -0.8
HERPUD1-204ENST00000439977 P0DMU3 169 aa10.04□□□□□ -0.8
HERPUD1-204ENST00000439977 FAM231AP0DMU4 169 aa10.04□□□□□ -0.8
HERPUD1-204ENST00000439977 FAM231CP0DMU5 169 aa10.04□□□□□ -0.8
HERPUD1-204ENST00000439977 COX6B1P14854 86 aa10.04□□□□□ -0.8
HERPUD1-204ENST00000439977 ARL17AQ8IVW1 177 aa10.04□□□□□ -0.8
HERPUD1-204ENST00000439977 KNCNA6PVL3 124 aa10.03□□□□□ -0.8
HERPUD1-204ENST00000439977 PROK1P58294 105 aa10.03□□□□□ -0.8
HERPUD1-204ENST00000439977 EPG5Q9HCE0 2579 aa10.03□□□□□ -0.8
HERPUD1-204ENST00000439977 NF1P21359 2839 aa10.03□□□□□ -0.8
HERPUD1-204ENST00000439977 ZNF469Q96JG9 3925 aaPredicted RBP10.03□□□□□ -0.8
HERPUD1-204ENST00000439977 M0QY20 66 aa10.03□□□□□ -0.8
HERPUD1-204ENST00000439977 INSL3P51460 131 aa10.03□□□□□ -0.8
HERPUD1-204ENST00000439977 NIPBLQ6KC79 2804 aaeCLIP10.03□□□□□ -0.8
HERPUD1-204ENST00000439977 HOXD3P31249 432 aaPredicted RBP10.03□□□□□ -0.8
HERPUD1-204ENST00000439977 POM121L12Q8N7R1 296 aa10.03□□□□□ -0.8
HERPUD1-204ENST00000439977 IGHV1OR15-1A0A075B7D0 117 aa10.02□□□□□ -0.81
HERPUD1-204ENST00000439977 K7EQG2 157 aa10.02□□□□□ -0.81
HERPUD1-204ENST00000439977 Q9UF83 564 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms