RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 DKK2Q9UBU2 259 aa12.28□□□□□ -0.44
PTPN13-204ENST00000436978 ETDCA0A1B0GVM5 59 aa12.28□□□□□ -0.44
PTPN13-204ENST00000436978 WIPF3A6NGB9 483 aa12.28□□□□□ -0.44
PTPN13-204ENST00000436978 IGLL1P15814 213 aa12.28□□□□□ -0.44
PTPN13-204ENST00000436978 FAM208BQ5VWN6 2430 aa12.28□□□□□ -0.44
PTPN13-204ENST00000436978 ZFP36P26651 326 aaKnown RBP12.28□□□□□ -0.44
PTPN13-204ENST00000436978 IGKV1-17P01599 117 aa12.27□□□□□ -0.45
PTPN13-204ENST00000436978 HAMPP81172 84 aa12.27□□□□□ -0.45
PTPN13-204ENST00000436978 TEX22C9J3V5 150 aa12.27□□□□□ -0.45
PTPN13-204ENST00000436978 COX7B2Q8TF08 81 aa12.27□□□□□ -0.45
PTPN13-204ENST00000436978 LOXL1Q08397 574 aaPredicted RBP12.27□□□□□ -0.45
PTPN13-204ENST00000436978 FUSP35637 526 aaKnown RBP eCLIP12.27□□□□□ -0.45
PTPN13-204ENST00000436978 CXCL5P42830 114 aa12.27□□□□□ -0.45
PTPN13-204ENST00000436978 EXPH5Q8NEV8 1989 aa12.27□□□□□ -0.45
PTPN13-204ENST00000436978 RPL39LQ96EH5 51 aaKnown RBP12.27□□□□□ -0.45
PTPN13-204ENST00000436978 TMEM263Q8WUH6 116 aaKnown RBP12.26□□□□□ -0.45
PTPN13-204ENST00000436978 SIRPDQ9H106 197 aa12.26□□□□□ -0.45
PTPN13-204ENST00000436978 C9orf153Q5TBE3 101 aa12.25□□□□□ -0.45
PTPN13-204ENST00000436978 ZNF747Q9BV97 191 aa12.25□□□□□ -0.45
PTPN13-204ENST00000436978 SMAD5-AS1Q9Y6J3 95 aa12.25□□□□□ -0.45
PTPN13-204ENST00000436978 NDUFA11Q86Y39 141 aa12.25□□□□□ -0.45
PTPN13-204ENST00000436978 COL4A3Q01955 1670 aa12.25□□□□□ -0.45
PTPN13-204ENST00000436978 ASPHD1Q5U4P2 390 aa12.25□□□□□ -0.45
PTPN13-204ENST00000436978 Q8N7P7 452 aa12.25□□□□□ -0.45
PTPN13-204ENST00000436978 PLA2G5P39877 138 aa12.24□□□□□ -0.45
PTPN13-204ENST00000436978 CITED1Q99966 193 aa12.24□□□□□ -0.45
PTPN13-204ENST00000436978 IGLV1-47P01700 117 aa12.24□□□□□ -0.45
PTPN13-204ENST00000436978 NRGNQ92686 78 aa12.24□□□□□ -0.45
PTPN13-204ENST00000436978 TRBV6-1A0A0K0K1D8 114 aa12.24□□□□□ -0.45
PTPN13-204ENST00000436978 ODF3L1Q8IXM7 274 aa12.24□□□□□ -0.45
PTPN13-204ENST00000436978 Q8N1Y9 231 aa12.24□□□□□ -0.45
PTPN13-204ENST00000436978 DNAJC9-AS1A6NH13 148 aa12.24□□□□□ -0.45
PTPN13-204ENST00000436978 ZFP2Q6ZN57 461 aa12.24□□□□□ -0.45
PTPN13-204ENST00000436978 NDUFS5O43920 106 aa12.24□□□□□ -0.45
PTPN13-204ENST00000436978 A0A1W2PNU3 283 aaPredicted RBP12.24□□□□□ -0.45
PTPN13-204ENST00000436978 NDUFA1O15239 70 aa12.23□□□□□ -0.45
PTPN13-204ENST00000436978 C12orf74Q32Q52 190 aa12.23□□□□□ -0.45
PTPN13-204ENST00000436978 AMTNQ6UX39 209 aa12.23□□□□□ -0.45
PTPN13-204ENST00000436978 DEFB105AQ8NG35 78 aa12.23□□□□□ -0.45
PTPN13-204ENST00000436978 TRAV4A0A0B4J268 109 aa12.23□□□□□ -0.45
PTPN13-204ENST00000436978 Q8NA96 180 aa12.23□□□□□ -0.45
PTPN13-204ENST00000436978 C5orf38Q86SI9 138 aa12.22□□□□□ -0.45
PTPN13-204ENST00000436978 H0YGX0 51 aa12.22□□□□□ -0.45
PTPN13-204ENST00000436978 K7ERJ3 54 aa12.22□□□□□ -0.45
PTPN13-204ENST00000436978 IGHV3-30P01768 117 aa12.22□□□□□ -0.45
PTPN13-204ENST00000436978 IGHV3-33P01772 117 aa12.22□□□□□ -0.45
PTPN13-204ENST00000436978 IGHV3-30-3P0DP02 117 aa12.22□□□□□ -0.45
PTPN13-204ENST00000436978 IGHV3-30-5P0DP03 117 aa12.22□□□□□ -0.45
PTPN13-204ENST00000436978 TOMM6Q96B49 74 aa12.22□□□□□ -0.45
PTPN13-204ENST00000436978 SPANXCQ9NY87 97 aa12.22□□□□□ -0.45
PTPN13-204ENST00000436978 A6NDX4 124 aa12.21□□□□□ -0.45
PTPN13-204ENST00000436978 ACYP1P07311 99 aa12.21□□□□□ -0.45
PTPN13-204ENST00000436978 CFC1BP0CG36 223 aa12.21□□□□□ -0.45
PTPN13-204ENST00000436978 CFC1P0CG37 223 aa12.21□□□□□ -0.45
PTPN13-204ENST00000436978 CTRLP40313 264 aa12.21□□□□□ -0.45
PTPN13-204ENST00000436978 ANKRD29Q8N6D5 301 aa12.21□□□□□ -0.46
PTPN13-204ENST00000436978 TRAV12-1A0A0B4J245 112 aa12.21□□□□□ -0.46
PTPN13-204ENST00000436978 TNFRSF13BO14836 293 aaPredicted RBP12.21□□□□□ -0.46
PTPN13-204ENST00000436978 FSTL3O95633 263 aa12.21□□□□□ -0.46
PTPN13-204ENST00000436978 FAM167A-AS1Q96KT0 104 aa12.21□□□□□ -0.46
PTPN13-204ENST00000436978 PRR14LQ5THK1 2151 aa12.21□□□□□ -0.46
PTPN13-204ENST00000436978 CITED2Q99967 270 aaPredicted RBP12.2□□□□□ -0.46
PTPN13-204ENST00000436978 ZFHX2Q9C0A1 2572 aaPredicted RBP12.2□□□□□ -0.46
PTPN13-204ENST00000436978 K7EP13 123 aa12.2□□□□□ -0.46
PTPN13-204ENST00000436978 BAALC-AS2P0C853 105 aa12.2□□□□□ -0.46
PTPN13-204ENST00000436978 C14orf177Q52M58 125 aa12.2□□□□□ -0.46
PTPN13-204ENST00000436978 IGLV2-14P01704 120 aa12.2□□□□□ -0.46
PTPN13-204ENST00000436978 HIST2H2BCQ6DN03 193 aa12.19□□□□□ -0.46
PTPN13-204ENST00000436978 DEFB135Q30KP9 77 aa12.19□□□□□ -0.46
PTPN13-204ENST00000436978 IGLV10-54A0A075B6I4 117 aa12.19□□□□□ -0.46
PTPN13-204ENST00000436978 SND1-IT1Q9HBX3 110 aa12.19□□□□□ -0.46
PTPN13-204ENST00000436978 SPRY2O43597 315 aa12.19□□□□□ -0.46
PTPN13-204ENST00000436978 ODF3Q96PU9 254 aa12.19□□□□□ -0.46
PTPN13-204ENST00000436978 PTPRQQ9UMZ3 2332 aa12.18□□□□□ -0.46
PTPN13-204ENST00000436978 TRACP01848 142 aa12.18□□□□□ -0.46
PTPN13-204ENST00000436978 PATE2Q6UY27 113 aa12.18□□□□□ -0.46
PTPN13-204ENST00000436978 TINCRA0A1B0GVN0 87 aa12.18□□□□□ -0.46
PTPN13-204ENST00000436978 ODF3BA8MYP8 253 aa12.17□□□□□ -0.46
PTPN13-204ENST00000436978 ADAMTS20P59510 1910 aa12.17□□□□□ -0.46
PTPN13-204ENST00000436978 LINC00574Q9H8X3 128 aa12.17□□□□□ -0.46
PTPN13-204ENST00000436978 H3BMG7 143 aa12.17□□□□□ -0.46
PTPN13-204ENST00000436978 UBE2AP49459 152 aa12.17□□□□□ -0.46
PTPN13-204ENST00000436978 C15orf53Q8NAA6 179 aa12.17□□□□□ -0.46
PTPN13-204ENST00000436978 BAALCQ8WXS3 180 aa12.17□□□□□ -0.46
PTPN13-204ENST00000436978 TIMM17AQ99595 171 aa12.17□□□□□ -0.46
PTPN13-204ENST00000436978 OPRPNQ99935 248 aaPredicted RBP12.16□□□□□ -0.46
PTPN13-204ENST00000436978 GATA1P15976 413 aaPredicted RBP12.16□□□□□ -0.46
PTPN13-204ENST00000436978 LGALS9O00182 355 aa12.15□□□□□ -0.46
PTPN13-204ENST00000436978 C4orf48Q5BLP8 95 aa12.15□□□□□ -0.46
PTPN13-204ENST00000436978 MAP6D1Q9H9H5 199 aa12.15□□□□□ -0.46
PTPN13-204ENST00000436978 A0A0J9YX75 114 aa12.15□□□□□ -0.46
PTPN13-204ENST00000436978 TRBV10-1A0A0K0K1A3 114 aa12.15□□□□□ -0.46
PTPN13-204ENST00000436978 Q6YL49 198 aa12.15□□□□□ -0.47
PTPN13-204ENST00000436978 NDUFB1O75438 58 aa12.14□□□□□ -0.47
PTPN13-204ENST00000436978 LYPD6Q86Y78 171 aa12.14□□□□□ -0.47
PTPN13-204ENST00000436978 IGHV4-31P0DP07 118 aa12.14□□□□□ -0.47
PTPN13-204ENST00000436978 CREBBPQ92793 2442 aa12.14□□□□□ -0.47
PTPN13-204ENST00000436978 ANKHD1Q8IWZ3 2542 aaKnown RBP12.14□□□□□ -0.47
PTPN13-204ENST00000436978 SMIM9A6NGZ8 99 aa12.14□□□□□ -0.47
PTPN13-204ENST00000436978 C11orf86A6NJI1 115 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms