RNA–Protein interactions for RNA: ENST00000434585.5

RAB11FIP3-203, Transcript of RAB11 family interacting protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene RAB11FIP3, Length 3,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-203ENST00000434585 A0A087WW49 117 aa9.28□□□□□ -0.92
RAB11FIP3-203ENST00000434585 DUSP14O95147 198 aaKnown RBP9.28□□□□□ -0.92
RAB11FIP3-203ENST00000434585 FXYD2P54710 66 aa9.28□□□□□ -0.92
RAB11FIP3-203ENST00000434585 DGAT2L7PQ6IED9 249 aa9.28□□□□□ -0.92
RAB11FIP3-203ENST00000434585 HOXD3P31249 432 aaPredicted RBP9.27□□□□□ -0.93
RAB11FIP3-203ENST00000434585 HSD52Q0P140 79 aa9.27□□□□□ -0.93
RAB11FIP3-203ENST00000434585 XCL2Q9UBD3 114 aa9.27□□□□□ -0.93
RAB11FIP3-203ENST00000434585 SDHAF1A6NFY7 115 aa9.27□□□□□ -0.93
RAB11FIP3-203ENST00000434585 ODF1Q14990 250 aa9.27□□□□□ -0.93
RAB11FIP3-203ENST00000434585 GCN1Q92616 2671 aaKnown RBP9.26□□□□□ -0.93
RAB11FIP3-203ENST00000434585 A6NDX4 124 aa9.26□□□□□ -0.93
RAB11FIP3-203ENST00000434585 ADARB2-AS1A8MUL3 147 aa9.26□□□□□ -0.93
RAB11FIP3-203ENST00000434585 C9orf47Q6ZRZ4 202 aa9.26□□□□□ -0.93
RAB11FIP3-203ENST00000434585 DEFB125Q8N687 156 aa9.26□□□□□ -0.93
RAB11FIP3-203ENST00000434585 ZFAND2AQ8N6M9 145 aa9.26□□□□□ -0.93
RAB11FIP3-203ENST00000434585 GATD1Q8NB37 220 aa9.26□□□□□ -0.93
RAB11FIP3-203ENST00000434585 ATRQ13535 2644 aa9.26□□□□□ -0.93
RAB11FIP3-203ENST00000434585 TRBV6-1A0A0K0K1D8 114 aa9.26□□□□□ -0.93
RAB11FIP3-203ENST00000434585 SLC25A16P16260 332 aa9.26□□□□□ -0.93
RAB11FIP3-203ENST00000434585 SAMD5Q5TGI4 173 aa9.26□□□□□ -0.93
RAB11FIP3-203ENST00000434585 NDUFS8O00217 210 aa9.25□□□□□ -0.93
RAB11FIP3-203ENST00000434585 ORMDL2Q53FV1 153 aa9.25□□□□□ -0.93
RAB11FIP3-203ENST00000434585 SYT8Q8NBV8 401 aa9.25□□□□□ -0.93
RAB11FIP3-203ENST00000434585 ZNF418Q8TF45 676 aaPredicted RBP9.25□□□□□ -0.93
RAB11FIP3-203ENST00000434585 VPS13CQ709C8 3753 aa9.25□□□□□ -0.93
RAB11FIP3-203ENST00000434585 TRBV25-1A0A075B6N4 114 aa9.25□□□□□ -0.93
RAB11FIP3-203ENST00000434585 CRXO43186 299 aaPredicted RBP9.25□□□□□ -0.93
RAB11FIP3-203ENST00000434585 SAP30O75446 220 aa9.25□□□□□ -0.93
RAB11FIP3-203ENST00000434585 P0DMU3 169 aa9.24□□□□□ -0.93
RAB11FIP3-203ENST00000434585 FAM231AP0DMU4 169 aa9.24□□□□□ -0.93
RAB11FIP3-203ENST00000434585 FAM231CP0DMU5 169 aa9.24□□□□□ -0.93
RAB11FIP3-203ENST00000434585 C2orf91Q6ZV80 131 aa9.24□□□□□ -0.93
RAB11FIP3-203ENST00000434585 Q8N1Y9 231 aa9.24□□□□□ -0.93
RAB11FIP3-203ENST00000434585 MRPL16Q9NX20 251 aaKnown RBP9.24□□□□□ -0.93
RAB11FIP3-203ENST00000434585 PRSS29PA6NIE9 313 aa9.24□□□□□ -0.93
RAB11FIP3-203ENST00000434585 SEC11AP67812 179 aa9.24□□□□□ -0.93
RAB11FIP3-203ENST00000434585 RBAKDNA6NC62 111 aa9.24□□□□□ -0.93
RAB11FIP3-203ENST00000434585 PSMB2P49721 201 aa9.24□□□□□ -0.93
RAB11FIP3-203ENST00000434585 OR9G4Q8NGQ1 327 aa9.24□□□□□ -0.93
RAB11FIP3-203ENST00000434585 CST9LQ9H4G1 147 aa9.24□□□□□ -0.93
RAB11FIP3-203ENST00000434585 TEP1Q99973 2627 aaKnown RBP9.24□□□□□ -0.93
RAB11FIP3-203ENST00000434585 H7C1H1 209 aa9.23□□□□□ -0.93
RAB11FIP3-203ENST00000434585 K7ERU9 68 aa9.23□□□□□ -0.93
RAB11FIP3-203ENST00000434585 PRADC1Q9BSG0 188 aa9.23□□□□□ -0.93
RAB11FIP3-203ENST00000434585 HERVK_113P61574 105 aa9.23□□□□□ -0.93
RAB11FIP3-203ENST00000434585 CFHR3Q02985 330 aa9.23□□□□□ -0.93
RAB11FIP3-203ENST00000434585 RASL10AQ92737 203 aa9.23□□□□□ -0.93
RAB11FIP3-203ENST00000434585 BBC3Q96PG8 261 aaPredicted RBP9.23□□□□□ -0.93
RAB11FIP3-203ENST00000434585 GAGE1Q13065 139 aa9.23□□□□□ -0.93
RAB11FIP3-203ENST00000434585 MAPKAPK5-AS1Q8N8E1 139 aa9.23□□□□□ -0.93
RAB11FIP3-203ENST00000434585 MRPL52Q86TS9 123 aaKnown RBP9.22□□□□□ -0.93
RAB11FIP3-203ENST00000434585 TNFRSF18Q9Y5U5 241 aa9.22□□□□□ -0.93
RAB11FIP3-203ENST00000434585 MUC4Q99102 2169 aa9.22□□□□□ -0.93
RAB11FIP3-203ENST00000434585 CDKN1BP46527 198 aa9.22□□□□□ -0.93
RAB11FIP3-203ENST00000434585 SUMO4Q6EEV6 95 aa9.22□□□□□ -0.93
RAB11FIP3-203ENST00000434585 CEMP1Q6PRD7 247 aaPredicted RBP9.22□□□□□ -0.93
RAB11FIP3-203ENST00000434585 ZNF479Q96JC4 524 aa9.22□□□□□ -0.93
RAB11FIP3-203ENST00000434585 SPXQ9BT56 116 aa9.22□□□□□ -0.93
RAB11FIP3-203ENST00000434585 YAE1D1Q9NRH1 226 aa9.22□□□□□ -0.93
RAB11FIP3-203ENST00000434585 LGALS3P17931 250 aaKnown RBP9.22□□□□□ -0.93
RAB11FIP3-203ENST00000434585 SRSF2Q01130 221 aaKnown RBP9.22□□□□□ -0.93
RAB11FIP3-203ENST00000434585 GPHB5Q86YW7 130 aa9.22□□□□□ -0.93
RAB11FIP3-203ENST00000434585 TRAV2A0A0B4J234 112 aa9.21□□□□□ -0.93
RAB11FIP3-203ENST00000434585 PROK1P58294 105 aa9.21□□□□□ -0.93
RAB11FIP3-203ENST00000434585 BOD1L2Q8IYS8 172 aa9.21□□□□□ -0.93
RAB11FIP3-203ENST00000434585 F8VRH5 84 aa9.21□□□□□ -0.94
RAB11FIP3-203ENST00000434585 NSUN5P1Q3KNT7 163 aa9.21□□□□□ -0.94
RAB11FIP3-203ENST00000434585 HLA-DRB4P13762 266 aa9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 RPL35AP18077 110 aaKnown RBP9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 VPREB3Q9UKI3 123 aa9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 HLA-DRB4X5D2U9 266 aa9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 NRACQ8N912 160 aa9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 MRAP2Q96G30 205 aa9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 RAX2Q96IS3 184 aa9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 VCX2Q9H322 139 aa9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 ZFHX3Q15911 3703 aa9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 NIPBLQ6KC79 2804 aaeCLIP9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 IGHV1OR15-1A0A075B7D0 117 aa9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 A0A087WX48 190 aa9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 H3BMG7 143 aa9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 FGF6P10767 208 aa9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 ZNF625Q96I27 306 aaPredicted RBP9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 UBR5O95071 2799 aaPredicted RBP9.2□□□□□ -0.94
RAB11FIP3-203ENST00000434585 RNASE3P12724 160 aaKnown RBP9.19□□□□□ -0.94
RAB11FIP3-203ENST00000434585 U3KQK5 164 aa9.19□□□□□ -0.94
RAB11FIP3-203ENST00000434585 OCIAD2Q56VL3 154 aa9.19□□□□□ -0.94
RAB11FIP3-203ENST00000434585 TMEM61Q8N0U2 210 aa9.19□□□□□ -0.94
RAB11FIP3-203ENST00000434585 C9orf118A6NHY6 69 aa9.19□□□□□ -0.94
RAB11FIP3-203ENST00000434585 VCYO14598 125 aa9.19□□□□□ -0.94
RAB11FIP3-203ENST00000434585 CD28P10747 220 aa9.19□□□□□ -0.94
RAB11FIP3-203ENST00000434585 PLNP26678 52 aa9.19□□□□□ -0.94
RAB11FIP3-203ENST00000434585 TRGV1A0A0A0MS02 117 aa9.18□□□□□ -0.94
RAB11FIP3-203ENST00000434585 PGPEP1Q9NXJ5 209 aa9.18□□□□□ -0.94
RAB11FIP3-203ENST00000434585 A0A1B0GWB2 263 aa9.18□□□□□ -0.94
RAB11FIP3-203ENST00000434585 WFDC11Q8NEX6 87 aa9.18□□□□□ -0.94
RAB11FIP3-203ENST00000434585 SETXQ7Z333 2677 aaKnown RBP9.17□□□□□ -0.94
RAB11FIP3-203ENST00000434585 ETDBQ3ZM63 59 aa9.17□□□□□ -0.94
RAB11FIP3-203ENST00000434585 BAALCQ8WXS3 180 aa9.17□□□□□ -0.94
RAB11FIP3-203ENST00000434585 MRPL53Q96EL3 112 aaKnown RBP9.17□□□□□ -0.94
RAB11FIP3-203ENST00000434585 STHQ8IWL8 128 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms