RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 LINC00315P59091 139 aa3.91□□□□□ -1.78
RIF1-203ENST00000428287 LYZP61626 148 aa3.91□□□□□ -1.78
RIF1-203ENST00000428287 CFHR4Q92496 578 aa3.91□□□□□ -1.78
RIF1-203ENST00000428287 CTSGP08311 255 aa3.9□□□□□ -1.78
RIF1-203ENST00000428287 TTC32Q5I0X7 151 aa3.9□□□□□ -1.78
RIF1-203ENST00000428287 KLHL30-AS1Q8NEE0 82 aa3.9□□□□□ -1.78
RIF1-203ENST00000428287 SPXQ9BT56 116 aa3.9□□□□□ -1.78
RIF1-203ENST00000428287 MED14OSP0DP75 135 aa3.9□□□□□ -1.78
RIF1-203ENST00000428287 TNFAIP6P98066 277 aaPredicted RBP3.9□□□□□ -1.78
RIF1-203ENST00000428287 ZNRF2Q8NHG8 242 aa3.9□□□□□ -1.78
RIF1-203ENST00000428287 U3KQE9 123 aa3.9□□□□□ -1.78
RIF1-203ENST00000428287 SNCGO76070 127 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 TGP01266 2768 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 TRGV3P03979 118 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 EBI3Q14213 229 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 GPHB5Q86YW7 130 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 KIR2DL4Q99706 377 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 SMAD5-AS1Q9Y6J3 95 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 ZNF815PA8K554 130 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 CCDC179H3BU77 68 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 DUSP14O95147 198 aaKnown RBP3.9□□□□□ -1.79
RIF1-203ENST00000428287 NXPH4O95158 308 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 SRSF9Q13242 221 aaKnown RBP eCLIP3.9□□□□□ -1.79
RIF1-203ENST00000428287 C2orf66Q6UXQ4 117 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 Q6ZS46 218 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 A4D1N5 150 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 ZFAND2AQ8N6M9 145 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 ZFAND3Q9H8U3 227 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 IGLV4-69A0A075B6H9 119 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 TRBV6-5A0A0K0K1A5 114 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 HES1Q14469 280 aa3.9□□□□□ -1.79
RIF1-203ENST00000428287 TMSB15BA0A087X1C1 80 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 TSHBP01222 138 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 HIST1H4AP62805 103 aaKnown RBP3.89□□□□□ -1.79
RIF1-203ENST00000428287 VPREB3Q9UKI3 123 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 DYNAPQ8N1N2 210 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 AGPAT4-IT1Q9H0P7 198 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 CLEC3BP05452 202 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 ZNF22P17026 224 aaPredicted RBP3.89□□□□□ -1.79
RIF1-203ENST00000428287 FAM159AQ6UWV7 190 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 ASCL5Q7RTU5 278 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 PPDPFQ9H3Y8 114 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 TRBV10-2A0A0K0K1G8 114 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 C9JAW5 83 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 BUB1B-PAK6H3BSN5 160 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 LINC01620Q4KN68 170 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 SCGB1D4Q6XE38 83 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 CNEP1R1Q8N9A8 125 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 LY6G5BQ8NDX9 201 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 Q8TAT8 98 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 FAM57AQ8TBR7 257 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 ONECUT1Q9UBC0 465 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 CRIP2P52943 208 aaPredicted RBP3.89□□□□□ -1.79
RIF1-203ENST00000428287 MFAP4P55083 255 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 C22orf34Q6ZV56 151 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 TMEM105Q8N8V8 129 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 DEFB108BQ8NET1 73 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 NPBQ8NG41 125 aa3.89□□□□□ -1.79
RIF1-203ENST00000428287 TEX49A0A1B0GTD5 131 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 UQCRQO14949 82 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 METTL26Q96S19 204 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 TRAV8-2A0A0B4J237 113 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 SPRY3O43610 288 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 ADIPOQQ15848 244 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 C5orf38Q86SI9 138 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 PLEKHB2Q96CS7 222 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 IGKV2-40A0A087WW87 121 aaPredicted RBP3.88□□□□□ -1.79
RIF1-203ENST00000428287 IGKV2D-40P01614 121 aaPredicted RBP3.88□□□□□ -1.79
RIF1-203ENST00000428287 ORM1P02763 201 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 MEIG1Q5JSS6 88 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 NUP37Q8NFH4 326 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 SCGB3A1Q96QR1 104 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 TRGV11A0A075B6L2 103 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 TRAV17A0A0B4J275 112 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 PMVKQ15126 192 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 PRSS33Q8NF86 280 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 C21orf62Q9NYP8 219 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 J3QQQ9 107 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 TMEM101Q96IK0 257 aa3.88□□□□□ -1.79
RIF1-203ENST00000428287 CRYGAP11844 174 aa3.87□□□□□ -1.79
RIF1-203ENST00000428287 TMEM263Q8WUH6 116 aaKnown RBP3.87□□□□□ -1.79
RIF1-203ENST00000428287 LINC01587Q99440 93 aa3.87□□□□□ -1.79
RIF1-203ENST00000428287 LST1O00453 97 aa3.87□□□□□ -1.79
RIF1-203ENST00000428287 ACYP1P07311 99 aa3.87□□□□□ -1.79
RIF1-203ENST00000428287 CCL8P80075 99 aa3.87□□□□□ -1.79
RIF1-203ENST00000428287 DEFB127Q9H1M4 99 aa3.87□□□□□ -1.79
RIF1-203ENST00000428287 PSMB2P49721 201 aa3.87□□□□□ -1.79
RIF1-203ENST00000428287 C15orf53Q8NAA6 179 aa3.87□□□□□ -1.79
RIF1-203ENST00000428287 FAM19A4Q96LR4 140 aa3.87□□□□□ -1.79
RIF1-203ENST00000428287 TRAV26-2A0A0B4J265 109 aa3.87□□□□□ -1.79
RIF1-203ENST00000428287 TSPEAR-AS2P59090 65 aa3.87□□□□□ -1.79
RIF1-203ENST00000428287 NDPQ00604 133 aa3.87□□□□□ -1.79
RIF1-203ENST00000428287 FOXC1Q12948 553 aa3.87□□□□□ -1.79
RIF1-203ENST00000428287 YAE1D1Q9NRH1 226 aa3.87□□□□□ -1.79
RIF1-203ENST00000428287 ELANEP08246 267 aa3.87□□□□□ -1.79
RIF1-203ENST00000428287 NTN5Q8WTR8 489 aaPredicted RBP3.87□□□□□ -1.79
RIF1-203ENST00000428287 RNASE6Q93091 150 aaKnown RBP3.87□□□□□ -1.79
RIF1-203ENST00000428287 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.86□□□□□ -1.79
RIF1-203ENST00000428287 TMEM223A0PJW6 202 aa3.86□□□□□ -1.79
RIF1-203ENST00000428287 LINC00643Q86TS7 51 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms