RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CFAP126Q5VTH2 177 aa9.53□□□□□ -0.88
PRPF39-202ENST00000424478 Q6ZTC4 211 aa9.53□□□□□ -0.88
PRPF39-202ENST00000424478 RASL10AQ92737 203 aa9.53□□□□□ -0.88
PRPF39-202ENST00000424478 CXorf65A6NEN9 183 aa9.53□□□□□ -0.88
PRPF39-202ENST00000424478 CRYGDP07320 174 aa9.53□□□□□ -0.88
PRPF39-202ENST00000424478 DAD1P61803 113 aa9.53□□□□□ -0.88
PRPF39-202ENST00000424478 SLAQ13239 276 aa9.53□□□□□ -0.88
PRPF39-202ENST00000424478 RIGQ13278 110 aa9.53□□□□□ -0.88
PRPF39-202ENST00000424478 C12orf74Q32Q52 190 aa9.53□□□□□ -0.88
PRPF39-202ENST00000424478 FRZBQ92765 325 aa9.53□□□□□ -0.88
PRPF39-202ENST00000424478 SPXQ9BT56 116 aa9.53□□□□□ -0.88
PRPF39-202ENST00000424478 CNFNQ9BYD5 112 aa9.53□□□□□ -0.88
PRPF39-202ENST00000424478 F5H697 171 aa9.52□□□□□ -0.89
PRPF39-202ENST00000424478 SYT8Q8NBV8 401 aa9.52□□□□□ -0.89
PRPF39-202ENST00000424478 LYSTQ99698 3801 aa9.52□□□□□ -0.89
PRPF39-202ENST00000424478 MED14OSP0DP75 135 aa9.52□□□□□ -0.89
PRPF39-202ENST00000424478 OR4C5Q8NGB2 326 aa9.52□□□□□ -0.89
PRPF39-202ENST00000424478 NXPH4O95158 308 aa9.51□□□□□ -0.89
PRPF39-202ENST00000424478 SPART-AS1P0CW21 52 aa9.51□□□□□ -0.89
PRPF39-202ENST00000424478 HOXA5P20719 270 aa9.51□□□□□ -0.89
PRPF39-202ENST00000424478 RPS10P46783 165 aaKnown RBP9.51□□□□□ -0.89
PRPF39-202ENST00000424478 ZNF56Q15929 161 aa9.51□□□□□ -0.89
PRPF39-202ENST00000424478 TMEM136Q6ZRR5 245 aa9.51□□□□□ -0.89
PRPF39-202ENST00000424478 AP1S3Q96PC3 154 aa9.51□□□□□ -0.89
PRPF39-202ENST00000424478 CACNG7P62955 275 aa9.51□□□□□ -0.89
PRPF39-202ENST00000424478 C11orf45Q8TAV5 145 aa9.51□□□□□ -0.89
PRPF39-202ENST00000424478 KIF25-AS1Q9Y6Z4 181 aa9.51□□□□□ -0.89
PRPF39-202ENST00000424478 A0A0J9YY99 117 aa9.5□□□□□ -0.89
PRPF39-202ENST00000424478 LOC100131303A0A0U1RQF7 123 aa9.5□□□□□ -0.89
PRPF39-202ENST00000424478 LINC00315P59091 139 aa9.5□□□□□ -0.89
PRPF39-202ENST00000424478 TRBV24-1A0A075B6N3 115 aa9.5□□□□□ -0.89
PRPF39-202ENST00000424478 IGHV4-4A0A075B6R2 117 aa9.5□□□□□ -0.89
PRPF39-202ENST00000424478 FABP9Q0Z7S8 132 aa9.5□□□□□ -0.89
PRPF39-202ENST00000424478 RNF185Q96GF1 192 aa9.5□□□□□ -0.89
PRPF39-202ENST00000424478 SMIM17P0DL12 118 aa9.49□□□□□ -0.89
PRPF39-202ENST00000424478 U3KQK5 164 aa9.49□□□□□ -0.89
PRPF39-202ENST00000424478 LYRM9A8MSI8 78 aa9.49□□□□□ -0.89
PRPF39-202ENST00000424478 F5H768 121 aa9.49□□□□□ -0.89
PRPF39-202ENST00000424478 TRGC2P03986 189 aa9.49□□□□□ -0.89
PRPF39-202ENST00000424478 RAB5AP20339 215 aa9.49□□□□□ -0.89
PRPF39-202ENST00000424478 LGALS9BQ3B8N2 356 aa9.49□□□□□ -0.89
PRPF39-202ENST00000424478 RPL39LQ96EH5 51 aaKnown RBP9.49□□□□□ -0.89
PRPF39-202ENST00000424478 MRPL18Q9H0U6 180 aaKnown RBP9.49□□□□□ -0.89
PRPF39-202ENST00000424478 RAB4AP20338 218 aa9.48□□□□□ -0.89
PRPF39-202ENST00000424478 MRPL51Q4U2R6 128 aaKnown RBP9.48□□□□□ -0.89
PRPF39-202ENST00000424478 C11orf68Q9H3H3 251 aaKnown RBP9.48□□□□□ -0.89
PRPF39-202ENST00000424478 RS1O15537 224 aa9.48□□□□□ -0.89
PRPF39-202ENST00000424478 TMEM191AQ9H0A3 160 aa9.48□□□□□ -0.89
PRPF39-202ENST00000424478 DPH3P1Q9H4G8 78 aa9.48□□□□□ -0.89
PRPF39-202ENST00000424478 TRAPPC1Q9Y5R8 145 aa9.48□□□□□ -0.89
PRPF39-202ENST00000424478 A0A096LPF7 62 aa9.47□□□□□ -0.89
PRPF39-202ENST00000424478 TRGV4A0A0C4DH28 118 aa9.47□□□□□ -0.89
PRPF39-202ENST00000424478 TRGC1P0CF51 173 aa9.47□□□□□ -0.89
PRPF39-202ENST00000424478 SUMO4Q6EEV6 95 aa9.47□□□□□ -0.89
PRPF39-202ENST00000424478 UFSP1Q6NVU6 142 aa9.47□□□□□ -0.89
PRPF39-202ENST00000424478 ATP5L2Q7Z4Y8 100 aa9.47□□□□□ -0.89
PRPF39-202ENST00000424478 A8MWV9 139 aa9.47□□□□□ -0.89
PRPF39-202ENST00000424478 FAM104BQ5XKR9 115 aa9.47□□□□□ -0.89
PRPF39-202ENST00000424478 LINC00612Q8N6U2 182 aa9.47□□□□□ -0.89
PRPF39-202ENST00000424478 EDA2RQ9HAV5 297 aa9.47□□□□□ -0.89
PRPF39-202ENST00000424478 D6R8Y8 96 aa9.47□□□□□ -0.89
PRPF39-202ENST00000424478 FHL2Q14192 279 aa9.47□□□□□ -0.89
PRPF39-202ENST00000424478 GATD1Q8NB37 220 aa9.47□□□□□ -0.89
PRPF39-202ENST00000424478 STARD9Q9P2P6 4700 aa9.46□□□□□ -0.89
PRPF39-202ENST00000424478 DNAH7Q8WXX0 4024 aa9.46□□□□□ -0.89
PRPF39-202ENST00000424478 TRAV4A0A0B4J268 109 aa9.46□□□□□ -0.89
PRPF39-202ENST00000424478 SMIM15Q7Z3B0 74 aa9.46□□□□□ -0.89
PRPF39-202ENST00000424478 NEGR1Q7Z3B1 354 aa9.46□□□□□ -0.89
PRPF39-202ENST00000424478 SLC25A29Q8N8R3 303 aa9.46□□□□□ -0.89
PRPF39-202ENST00000424478 APCSP02743 223 aa9.46□□□□□ -0.9
PRPF39-202ENST00000424478 TRAV26-1A0A087WT03 109 aa9.45□□□□□ -0.9
PRPF39-202ENST00000424478 NHLRC4P0CG21 123 aaPredicted RBP9.45□□□□□ -0.9
PRPF39-202ENST00000424478 WDR73Q6P4I2 378 aa9.45□□□□□ -0.9
PRPF39-202ENST00000424478 TRAV9-1A0A075B6T8 112 aa9.45□□□□□ -0.9
PRPF39-202ENST00000424478 ATP5G1P05496 136 aa9.44□□□□□ -0.9
PRPF39-202ENST00000424478 GNB1LQ9BYB4 327 aa9.44□□□□□ -0.9
PRPF39-202ENST00000424478 IGHV3-38A0A0C4DH36 116 aa9.44□□□□□ -0.9
PRPF39-202ENST00000424478 CKS2P33552 79 aa9.44□□□□□ -0.9
PRPF39-202ENST00000424478 LOC389332A0A1B0GUA5 103 aa9.43□□□□□ -0.9
PRPF39-202ENST00000424478 NPYP01303 97 aa9.43□□□□□ -0.9
PRPF39-202ENST00000424478 IQCJQ1A5X6 159 aa9.43□□□□□ -0.9
PRPF39-202ENST00000424478 HHLA3Q9XRX5 114 aa9.43□□□□□ -0.9
PRPF39-202ENST00000424478 DEFB131BA0A096LNP1 70 aa9.43□□□□□ -0.9
PRPF39-202ENST00000424478 SRIP30626 198 aa9.43□□□□□ -0.9
PRPF39-202ENST00000424478 GAGE12JA6NER3 117 aa9.42□□□□□ -0.9
PRPF39-202ENST00000424478 M0QY20 66 aa9.42□□□□□ -0.9
PRPF39-202ENST00000424478 GAGE1Q13065 139 aa9.42□□□□□ -0.9
PRPF39-202ENST00000424478 GAGE4Q13068 117 aa9.42□□□□□ -0.9
PRPF39-202ENST00000424478 GAGE5Q13069 117 aa9.42□□□□□ -0.9
PRPF39-202ENST00000424478 GAGE13Q4V321 117 aa9.42□□□□□ -0.9
PRPF39-202ENST00000424478 PHLDA1Q8WV24 401 aaPredicted RBP9.42□□□□□ -0.9
PRPF39-202ENST00000424478 VSIG2Q96IQ7 327 aa9.42□□□□□ -0.9
PRPF39-202ENST00000424478 PLECQ15149 4684 aaKnown RBP9.42□□□□□ -0.9
PRPF39-202ENST00000424478 HLA-DQA1P01909 254 aa9.42□□□□□ -0.9
PRPF39-202ENST00000424478 ZFAND6Q6FIF0 208 aa9.42□□□□□ -0.9
PRPF39-202ENST00000424478 PTH2Q96A98 100 aa9.42□□□□□ -0.9
PRPF39-202ENST00000424478 A0A1B0GW15 77 aa9.42□□□□□ -0.9
PRPF39-202ENST00000424478 S100A8P05109 93 aa9.41□□□□□ -0.9
PRPF39-202ENST00000424478 TMA7Q9Y2S6 64 aaKnown RBP9.41□□□□□ -0.9
PRPF39-202ENST00000424478 GYPEP15421 78 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms