RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 TRGV9Q99603 122 aa3.17□□□□□ -1.9
PTP4A1P1-201ENST00000420539 CYP4F30PQ9H0H9 118 aa3.17□□□□□ -1.9
PTP4A1P1-201ENST00000420539 FREM3P0C091 2139 aa3.17□□□□□ -1.9
PTP4A1P1-201ENST00000420539 HEATR5BQ9P2D3 2071 aa3.16□□□□□ -1.9
PTP4A1P1-201ENST00000420539 COL2A1P02458 1487 aaPredicted RBP3.16□□□□□ -1.9
PTP4A1P1-201ENST00000420539 SHANK2Q9UPX8 1470 aa3.16□□□□□ -1.9
PTP4A1P1-201ENST00000420539 LAMB1P07942 1786 aa3.16□□□□□ -1.9
PTP4A1P1-201ENST00000420539 IGFBP7Q16270 282 aa3.16□□□□□ -1.9
PTP4A1P1-201ENST00000420539 DEFB134Q4QY38 66 aa3.16□□□□□ -1.9
PTP4A1P1-201ENST00000420539 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
PTP4A1P1-201ENST00000420539 LYPD1Q8N2G4 141 aa3.16□□□□□ -1.9
PTP4A1P1-201ENST00000420539 LINC00167Q96N53 147 aa3.16□□□□□ -1.9
PTP4A1P1-201ENST00000420539 CYSTM1Q9H1C7 97 aa3.16□□□□□ -1.9
PTP4A1P1-201ENST00000420539 CDC42SE1Q9NRR8 79 aa3.16□□□□□ -1.9
PTP4A1P1-201ENST00000420539 CCL26Q9Y258 94 aa3.16□□□□□ -1.9
PTP4A1P1-201ENST00000420539 SLIT2O94813 1529 aa3.15□□□□□ -1.9
PTP4A1P1-201ENST00000420539 TMEM30CPA0ZSE6 113 aa3.15□□□□□ -1.91
PTP4A1P1-201ENST00000420539 SYS1-DBNDD2H3BUS1 97 aa3.15□□□□□ -1.91
PTP4A1P1-201ENST00000420539 CTSGP08311 255 aa3.15□□□□□ -1.91
PTP4A1P1-201ENST00000420539 CNBPP62633 177 aaKnown RBP3.15□□□□□ -1.91
PTP4A1P1-201ENST00000420539 C1orf137Q5JT78 98 aa3.15□□□□□ -1.91
PTP4A1P1-201ENST00000420539 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
PTP4A1P1-201ENST00000420539 LINC00299Q6ZSB3 139 aa3.15□□□□□ -1.91
PTP4A1P1-201ENST00000420539 Q8N9L7 120 aa3.15□□□□□ -1.91
PTP4A1P1-201ENST00000420539 C22orf24Q9Y442 160 aa3.15□□□□□ -1.91
PTP4A1P1-201ENST00000420539 NLRP1Q9C000 1473 aa3.15□□□□□ -1.91
PTP4A1P1-201ENST00000420539 RGPD3A6NKT7 1758 aaPredicted RBP3.15□□□□□ -1.91
PTP4A1P1-201ENST00000420539 ZC3H13Q5T200 1668 aaKnown RBP3.14□□□□□ -1.91
PTP4A1P1-201ENST00000420539 A0A1W2PPM0 123 aa3.14□□□□□ -1.91
PTP4A1P1-201ENST00000420539 NDUFC1O43677 76 aa3.14□□□□□ -1.91
PTP4A1P1-201ENST00000420539 IGLC2P0DOY2 106 aa3.14□□□□□ -1.91
PTP4A1P1-201ENST00000420539 IGLC3P0DOY3 106 aa3.14□□□□□ -1.91
PTP4A1P1-201ENST00000420539 ETDBQ3ZM63 59 aa3.14□□□□□ -1.91
PTP4A1P1-201ENST00000420539 CSAG1Q6PB30 78 aa3.14□□□□□ -1.91
PTP4A1P1-201ENST00000420539 LYPD5Q6UWN5 251 aa3.14□□□□□ -1.91
PTP4A1P1-201ENST00000420539 IFI27L1Q96BM0 104 aa3.14□□□□□ -1.91
PTP4A1P1-201ENST00000420539 NXT2Q9NPJ8 142 aaKnown RBP3.14□□□□□ -1.91
PTP4A1P1-201ENST00000420539 TP53TG3Q9ULZ0 132 aa3.14□□□□□ -1.91
PTP4A1P1-201ENST00000420539 PTPRDP23468 1912 aa3.14□□□□□ -1.91
PTP4A1P1-201ENST00000420539 FANCAO15360 1455 aa3.14□□□□□ -1.91
PTP4A1P1-201ENST00000420539 TCHHQ07283 1943 aa3.13□□□□□ -1.91
PTP4A1P1-201ENST00000420539 THOC2Q8NI27 1593 aaKnown RBP3.13□□□□□ -1.91
PTP4A1P1-201ENST00000420539 LAMB2P55268 1798 aa3.13□□□□□ -1.91
PTP4A1P1-201ENST00000420539 TRBV7-1A0A0A6YYK4 115 aa3.13□□□□□ -1.91
PTP4A1P1-201ENST00000420539 SIX6O95475 246 aa3.13□□□□□ -1.91
PTP4A1P1-201ENST00000420539 IGHV3-33P01772 117 aa3.13□□□□□ -1.91
PTP4A1P1-201ENST00000420539 MPV17LQ2QL34 196 aa3.13□□□□□ -1.91
PTP4A1P1-201ENST00000420539 PATJQ8NI35 1801 aa3.13□□□□□ -1.91
PTP4A1P1-201ENST00000420539 MICAL3Q7RTP6 2002 aa3.13□□□□□ -1.91
PTP4A1P1-201ENST00000420539 TET3O43151 1660 aa3.13□□□□□ -1.91
PTP4A1P1-201ENST00000420539 SUPT6HQ7KZ85 1726 aaKnown RBP3.13□□□□□ -1.91
PTP4A1P1-201ENST00000420539 LAMB4A4D0S4 1761 aa3.12□□□□□ -1.91
PTP4A1P1-201ENST00000420539 KIF14Q15058 1648 aa3.12□□□□□ -1.91
PTP4A1P1-201ENST00000420539 NINQ8N4C6 2090 aa3.12□□□□□ -1.91
PTP4A1P1-201ENST00000420539 TRAV12-3A0A0B4J271 114 aa3.12□□□□□ -1.91
PTP4A1P1-201ENST00000420539 CFDP00746 253 aaPredicted RBP3.12□□□□□ -1.91
PTP4A1P1-201ENST00000420539 MOBPQ13875 183 aa3.12□□□□□ -1.91
PTP4A1P1-201ENST00000420539 WFDC2Q14508 124 aa3.12□□□□□ -1.91
PTP4A1P1-201ENST00000420539 NMSQ5H8A3 153 aa3.12□□□□□ -1.91
PTP4A1P1-201ENST00000420539 BVES-AS1Q5T3Y7 98 aa3.12□□□□□ -1.91
PTP4A1P1-201ENST00000420539 TIMM21Q9BVV7 248 aa3.12□□□□□ -1.91
PTP4A1P1-201ENST00000420539 EDC4Q6P2E9 1401 aaKnown RBP3.11□□□□□ -1.91
PTP4A1P1-201ENST00000420539 IGKV2D-24A0A075B6R9 120 aa3.11□□□□□ -1.91
PTP4A1P1-201ENST00000420539 ELOBQ15370 118 aa3.11□□□□□ -1.91
PTP4A1P1-201ENST00000420539 SH2D6Q7Z4S9 175 aa3.11□□□□□ -1.91
PTP4A1P1-201ENST00000420539 NDUFA11Q86Y39 141 aa3.11□□□□□ -1.91
PTP4A1P1-201ENST00000420539 KRTAP11-1Q8IUC1 163 aa3.11□□□□□ -1.91
PTP4A1P1-201ENST00000420539 MANBALQ9NQG1 85 aa3.11□□□□□ -1.91
PTP4A1P1-201ENST00000420539 CASP8AP2Q9UKL3 1982 aa3.11□□□□□ -1.91
PTP4A1P1-201ENST00000420539 ATP10BO94823 1461 aa3.1□□□□□ -1.91
PTP4A1P1-201ENST00000420539 MLH3Q9UHC1 1453 aa3.1□□□□□ -1.91
PTP4A1P1-201ENST00000420539 TANC1Q9C0D5 1861 aa3.1□□□□□ -1.91
PTP4A1P1-201ENST00000420539 IGLV4-60A0A075B6I1 120 aa3.1□□□□□ -1.91
PTP4A1P1-201ENST00000420539 A0A0G2JQZ4 141 aa3.1□□□□□ -1.91
PTP4A1P1-201ENST00000420539 TRBV10-1A0A0K0K1A3 114 aa3.1□□□□□ -1.91
PTP4A1P1-201ENST00000420539 CYP2G1PQ6ZSU1 146 aa3.1□□□□□ -1.91
PTP4A1P1-201ENST00000420539 PRR34Q9NV39 138 aa3.1□□□□□ -1.91
PTP4A1P1-201ENST00000420539 HIGD1BQ9P298 99 aa3.1□□□□□ -1.91
PTP4A1P1-201ENST00000420539 COL1A2P08123 1366 aa3.1□□□□□ -1.91
PTP4A1P1-201ENST00000420539 ADAMTS7Q9UKP4 1686 aa3.09□□□□□ -1.91
PTP4A1P1-201ENST00000420539 TEX49A0A1B0GTD5 131 aa3.09□□□□□ -1.91
PTP4A1P1-201ENST00000420539 A0A1W2PNU3 283 aaPredicted RBP3.09□□□□□ -1.91
PTP4A1P1-201ENST00000420539 H7BZZ5 65 aa3.09□□□□□ -1.91
PTP4A1P1-201ENST00000420539 RTL8CO15255 209 aa3.09□□□□□ -1.91
PTP4A1P1-201ENST00000420539 KRTAP10-5P60370 271 aa3.09□□□□□ -1.91
PTP4A1P1-201ENST00000420539 TPRXLQ17RH7 258 aa3.09□□□□□ -1.91
PTP4A1P1-201ENST00000420539 S100ZQ8WXG8 99 aa3.09□□□□□ -1.91
PTP4A1P1-201ENST00000420539 ODF3Q96PU9 254 aa3.09□□□□□ -1.91
PTP4A1P1-201ENST00000420539 ORMDL1Q9P0S3 153 aa3.09□□□□□ -1.91
PTP4A1P1-201ENST00000420539 RP1P56715 2156 aa3.09□□□□□ -1.91
PTP4A1P1-201ENST00000420539 ANKARQ7Z5J8 1434 aa3.09□□□□□ -1.92
PTP4A1P1-201ENST00000420539 MYO18AQ92614 2054 aaKnown RBP3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 COL4A5P29400 1685 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 NWD2Q9ULI1 1742 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 ATRXP46100 2492 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 A0A0G2JND7 137 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 UBE2D1P51668 147 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 UBE2D3P61077 147 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 UBE2D2P62837 147 aa3.08□□□□□ -1.92
PTP4A1P1-201ENST00000420539 C10orf128Q5T292 105 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms