RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 RBMY1A1P0DJD3 496 aaKnown RBP11.37□□□□□ -0.59
LRCH3-202ENST00000414675 RBMY1CP0DJD4 496 aa11.37□□□□□ -0.59
LRCH3-202ENST00000414675 CD28P10747 220 aa11.37□□□□□ -0.59
LRCH3-202ENST00000414675 RBMY1FQ15415 496 aaKnown RBP11.37□□□□□ -0.59
LRCH3-202ENST00000414675 VAMP3Q15836 100 aa11.37□□□□□ -0.59
LRCH3-202ENST00000414675 Q8N1Y9 231 aa11.37□□□□□ -0.59
LRCH3-202ENST00000414675 SMIM2Q9BVW6 85 aa11.37□□□□□ -0.59
LRCH3-202ENST00000414675 PRSS1P07477 247 aa11.36□□□□□ -0.59
LRCH3-202ENST00000414675 LAGE3Q14657 143 aa11.36□□□□□ -0.59
LRCH3-202ENST00000414675 C9orf85Q96MD7 179 aa11.36□□□□□ -0.59
LRCH3-202ENST00000414675 DKK2Q9UBU2 259 aa11.36□□□□□ -0.59
LRCH3-202ENST00000414675 RBMY1BA6NDE4 496 aaKnown RBP11.35□□□□□ -0.59
LRCH3-202ENST00000414675 RBMY1EA6NEQ0 496 aaKnown RBP11.35□□□□□ -0.59
LRCH3-202ENST00000414675 CBY3A6NI87 242 aa11.35□□□□□ -0.59
LRCH3-202ENST00000414675 TAX1BP3O14907 124 aa11.35□□□□□ -0.59
LRCH3-202ENST00000414675 RBMY1DP0C7P1 496 aaKnown RBP11.35□□□□□ -0.59
LRCH3-202ENST00000414675 ERASQ7Z444 233 aa11.35□□□□□ -0.59
LRCH3-202ENST00000414675 POM121L12Q8N7R1 296 aa11.35□□□□□ -0.59
LRCH3-202ENST00000414675 IGHV1OR15-1A0A075B7D0 117 aa11.35□□□□□ -0.59
LRCH3-202ENST00000414675 FGF6P10767 208 aa11.35□□□□□ -0.59
LRCH3-202ENST00000414675 NMUP48645 174 aa11.35□□□□□ -0.59
LRCH3-202ENST00000414675 SUMO2P61956 95 aaKnown RBP11.35□□□□□ -0.59
LRCH3-202ENST00000414675 DEFB114Q30KQ6 69 aa11.35□□□□□ -0.59
LRCH3-202ENST00000414675 A0A087WWL8 130 aa11.34□□□□□ -0.59
LRCH3-202ENST00000414675 SMIM17P0DL12 118 aa11.34□□□□□ -0.59
LRCH3-202ENST00000414675 TMEM97Q5BJF2 176 aa11.34□□□□□ -0.59
LRCH3-202ENST00000414675 DYNLRB2Q8TF09 96 aa11.34□□□□□ -0.59
LRCH3-202ENST00000414675 H3BMM0 161 aa11.34□□□□□ -0.59
LRCH3-202ENST00000414675 HLA-DRB4P13762 266 aa11.34□□□□□ -0.59
LRCH3-202ENST00000414675 CD300EQ496F6 205 aaPredicted RBP11.34□□□□□ -0.59
LRCH3-202ENST00000414675 SMR3AQ99954 134 aa11.34□□□□□ -0.59
LRCH3-202ENST00000414675 HLA-DRB4X5D2U9 266 aa11.34□□□□□ -0.59
LRCH3-202ENST00000414675 A8MTW9 85 aa11.33□□□□□ -0.6
LRCH3-202ENST00000414675 FHL3Q13643 280 aa11.33□□□□□ -0.6
LRCH3-202ENST00000414675 BOD1L2Q8IYS8 172 aa11.33□□□□□ -0.6
LRCH3-202ENST00000414675 LINC01006Q8NI28 216 aa11.33□□□□□ -0.6
LRCH3-202ENST00000414675 MAP6D1Q9H9H5 199 aa11.33□□□□□ -0.6
LRCH3-202ENST00000414675 TRAV2A0A0B4J234 112 aa11.33□□□□□ -0.6
LRCH3-202ENST00000414675 RNASE1P07998 156 aaKnown RBP11.33□□□□□ -0.6
LRCH3-202ENST00000414675 ODF1Q14990 250 aa11.33□□□□□ -0.6
LRCH3-202ENST00000414675 CITED2Q99967 270 aaPredicted RBP11.33□□□□□ -0.6
LRCH3-202ENST00000414675 C20orf78Q9BR46 151 aa11.33□□□□□ -0.6
LRCH3-202ENST00000414675 NOTCH2Q04721 2471 aa11.33□□□□□ -0.6
LRCH3-202ENST00000414675 OR4C5Q8NGB2 326 aa11.32□□□□□ -0.6
LRCH3-202ENST00000414675 ATP5LO75964 103 aa11.32□□□□□ -0.6
LRCH3-202ENST00000414675 SUMO4Q6EEV6 95 aa11.32□□□□□ -0.6
LRCH3-202ENST00000414675 NEGR1Q7Z3B1 354 aa11.32□□□□□ -0.6
LRCH3-202ENST00000414675 CCL24O00175 119 aa11.31□□□□□ -0.6
LRCH3-202ENST00000414675 SEC11AP67812 179 aa11.31□□□□□ -0.6
LRCH3-202ENST00000414675 ZNF256Q9Y2P7 627 aaPredicted RBP11.31□□□□□ -0.6
LRCH3-202ENST00000414675 IGKCP01834 107 aa11.3□□□□□ -0.6
LRCH3-202ENST00000414675 PRM2P04554 102 aa11.3□□□□□ -0.6
LRCH3-202ENST00000414675 NIPBLQ6KC79 2804 aaeCLIP11.3□□□□□ -0.6
LRCH3-202ENST00000414675 HIVEP2P31629 2446 aa11.3□□□□□ -0.6
LRCH3-202ENST00000414675 SETXQ7Z333 2677 aaKnown RBP11.3□□□□□ -0.6
LRCH3-202ENST00000414675 SIVA1O15304 175 aa11.3□□□□□ -0.6
LRCH3-202ENST00000414675 HSD52Q0P140 79 aa11.3□□□□□ -0.6
LRCH3-202ENST00000414675 PCP2Q8IVA1 136 aa11.3□□□□□ -0.6
LRCH3-202ENST00000414675 C16orf95Q9H693 158 aa11.3□□□□□ -0.6
LRCH3-202ENST00000414675 DPM2O94777 84 aa11.29□□□□□ -0.6
LRCH3-202ENST00000414675 FAM74A4Q5TZK3 123 aa11.29□□□□□ -0.6
LRCH3-202ENST00000414675 CSTL1Q9H114 145 aa11.29□□□□□ -0.6
LRCH3-202ENST00000414675 ZMAT4Q9H898 229 aa11.29□□□□□ -0.6
LRCH3-202ENST00000414675 CRYGDP07320 174 aa11.29□□□□□ -0.6
LRCH3-202ENST00000414675 OTOGQ6ZRI0 2925 aa11.29□□□□□ -0.6
LRCH3-202ENST00000414675 A6NDN8 102 aa11.28□□□□□ -0.6
LRCH3-202ENST00000414675 F5H697 171 aa11.28□□□□□ -0.6
LRCH3-202ENST00000414675 HTN1P15515 57 aa11.28□□□□□ -0.6
LRCH3-202ENST00000414675 DEFB104AQ8WTQ1 72 aa11.28□□□□□ -0.6
LRCH3-202ENST00000414675 ORMDL2Q53FV1 153 aa11.28□□□□□ -0.6
LRCH3-202ENST00000414675 AMMECR1LQ6DCA0 310 aa11.28□□□□□ -0.6
LRCH3-202ENST00000414675 HILS1P60008 231 aa11.27□□□□□ -0.61
LRCH3-202ENST00000414675 ODF3L2Q3SX64 289 aa11.27□□□□□ -0.61
LRCH3-202ENST00000414675 SYT8Q8NBV8 401 aa11.27□□□□□ -0.61
LRCH3-202ENST00000414675 SPAG8Q99932 426 aaPredicted RBP11.27□□□□□ -0.61
LRCH3-202ENST00000414675 TMEM160Q9NX00 188 aa11.27□□□□□ -0.61
LRCH3-202ENST00000414675 HHLA3Q9XRX5 114 aa11.27□□□□□ -0.61
LRCH3-202ENST00000414675 TSSC4Q9Y5U2 329 aaPredicted RBP11.27□□□□□ -0.61
LRCH3-202ENST00000414675 JMJD1CQ15652 2540 aa11.27□□□□□ -0.61
LRCH3-202ENST00000414675 TRGV11A0A075B6L2 103 aa11.26□□□□□ -0.61
LRCH3-202ENST00000414675 ZNF876PQ49A33 203 aa11.26□□□□□ -0.61
LRCH3-202ENST00000414675 MORN3Q6PF18 240 aaPredicted RBP11.26□□□□□ -0.61
LRCH3-202ENST00000414675 TOMM6Q96B49 74 aa11.26□□□□□ -0.61
LRCH3-202ENST00000414675 PPP1R17O96001 155 aa11.26□□□□□ -0.61
LRCH3-202ENST00000414675 POLR2KP53803 58 aaKnown RBP11.26□□□□□ -0.61
LRCH3-202ENST00000414675 GTSCR1Q86UQ5 136 aa11.26□□□□□ -0.61
LRCH3-202ENST00000414675 MRPL35Q9NZE8 188 aaKnown RBP11.26□□□□□ -0.61
LRCH3-202ENST00000414675 ZC2HC1BQ5TFG8 222 aa11.25□□□□□ -0.61
LRCH3-202ENST00000414675 ZNF418Q8TF45 676 aaPredicted RBP11.25□□□□□ -0.61
LRCH3-202ENST00000414675 NACAE9PAV3 2078 aa11.25□□□□□ -0.61
LRCH3-202ENST00000414675 IGKV2D-26A0A0A0MRZ7 120 aa11.25□□□□□ -0.61
LRCH3-202ENST00000414675 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.25□□□□□ -0.61
LRCH3-202ENST00000414675 K7EMI3 77 aa11.25□□□□□ -0.61
LRCH3-202ENST00000414675 ZNF56Q15929 161 aa11.25□□□□□ -0.61
LRCH3-202ENST00000414675 C2orf66Q6UXQ4 117 aa11.25□□□□□ -0.61
LRCH3-202ENST00000414675 M0QY20 66 aa11.24□□□□□ -0.61
LRCH3-202ENST00000414675 RPL32P62910 135 aaKnown RBP11.24□□□□□ -0.61
LRCH3-202ENST00000414675 SCGB3A1Q96QR1 104 aa11.24□□□□□ -0.61
LRCH3-202ENST00000414675 A0A087WX48 190 aa11.24□□□□□ -0.61
LRCH3-202ENST00000414675 TRAV8-6A0A0B4J262 113 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms