RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 SYT8Q8NBV8 401 aa12.43□□□□□ -0.42
LIMS2-208ENST00000410011 JPT2Q9H910 190 aa12.43□□□□□ -0.42
LIMS2-208ENST00000410011 TRAV12-3A0A0B4J271 114 aa12.42□□□□□ -0.42
LIMS2-208ENST00000410011 A0A0J9YX75 114 aa12.42□□□□□ -0.42
LIMS2-208ENST00000410011 RHOHQ15669 191 aa12.42□□□□□ -0.42
LIMS2-208ENST00000410011 AKAP6Q13023 2319 aa12.41□□□□□ -0.42
LIMS2-208ENST00000410011 A0A0J9YY99 117 aa12.41□□□□□ -0.42
LIMS2-208ENST00000410011 SNRPD3P62318 126 aaKnown RBP12.41□□□□□ -0.42
LIMS2-208ENST00000410011 SRSF9Q13242 221 aaKnown RBP eCLIP12.41□□□□□ -0.42
LIMS2-208ENST00000410011 CD300EQ496F6 205 aaPredicted RBP12.41□□□□□ -0.42
LIMS2-208ENST00000410011 PLEKHB2Q96CS7 222 aa12.41□□□□□ -0.42
LIMS2-208ENST00000410011 A0A087WWL8 130 aa12.4□□□□□ -0.42
LIMS2-208ENST00000410011 F5H697 171 aa12.4□□□□□ -0.42
LIMS2-208ENST00000410011 K7EQG2 157 aa12.4□□□□□ -0.42
LIMS2-208ENST00000410011 M0QY20 66 aa12.4□□□□□ -0.42
LIMS2-208ENST00000410011 EDN2P20800 178 aa12.4□□□□□ -0.42
LIMS2-208ENST00000410011 NSUN5P1Q3KNT7 163 aa12.4□□□□□ -0.42
LIMS2-208ENST00000410011 NFE4Q86UQ8 179 aa12.4□□□□□ -0.42
LIMS2-208ENST00000410011 PGPEP1Q9NXJ5 209 aa12.4□□□□□ -0.42
LIMS2-208ENST00000410011 AVPP01185 164 aa12.39□□□□□ -0.43
LIMS2-208ENST00000410011 DSCR9P59020 149 aa12.39□□□□□ -0.43
LIMS2-208ENST00000410011 RPL39P62891 51 aaKnown RBP12.39□□□□□ -0.43
LIMS2-208ENST00000410011 AMTNQ6UX39 209 aa12.39□□□□□ -0.43
LIMS2-208ENST00000410011 KLHL30-AS1Q8NEE0 82 aa12.39□□□□□ -0.43
LIMS2-208ENST00000410011 TMEM238C9JI98 176 aa12.39□□□□□ -0.43
LIMS2-208ENST00000410011 SCGB1A1P11684 91 aa12.39□□□□□ -0.43
LIMS2-208ENST00000410011 TRPT1Q86TN4 253 aaKnown RBP12.39□□□□□ -0.43
LIMS2-208ENST00000410011 SLC25A29Q8N8R3 303 aa12.39□□□□□ -0.43
LIMS2-208ENST00000410011 MRPL16Q9NX20 251 aaKnown RBP12.39□□□□□ -0.43
LIMS2-208ENST00000410011 IGHV1OR15-1A0A075B7D0 117 aa12.38□□□□□ -0.43
LIMS2-208ENST00000410011 ZNF256Q9Y2P7 627 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-208ENST00000410011 UBE2D3P61077 147 aa12.38□□□□□ -0.43
LIMS2-208ENST00000410011 UBE2D2P62837 147 aa12.38□□□□□ -0.43
LIMS2-208ENST00000410011 ETDBQ3ZM63 59 aa12.38□□□□□ -0.43
LIMS2-208ENST00000410011 DLX4Q92988 240 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-208ENST00000410011 MDFICQ9P1T7 246 aa12.38□□□□□ -0.43
LIMS2-208ENST00000410011 LYRM7Q5U5X0 104 aa12.37□□□□□ -0.43
LIMS2-208ENST00000410011 Q8N1Y9 231 aa12.37□□□□□ -0.43
LIMS2-208ENST00000410011 ATP6V0E2Q8NHE4 81 aa12.37□□□□□ -0.43
LIMS2-208ENST00000410011 ZNRF2Q8NHG8 242 aa12.37□□□□□ -0.43
LIMS2-208ENST00000410011 SPATA25Q9BR10 227 aa12.37□□□□□ -0.43
LIMS2-208ENST00000410011 EDA2RQ9HAV5 297 aa12.37□□□□□ -0.43
LIMS2-208ENST00000410011 SPTAN1Q13813 2472 aaKnown RBP12.37□□□□□ -0.43
LIMS2-208ENST00000410011 ZNF688P0C7X2 276 aa12.37□□□□□ -0.43
LIMS2-208ENST00000410011 SIGMAR1Q99720 223 aa12.37□□□□□ -0.43
LIMS2-208ENST00000410011 ZFHX3Q15911 3703 aa12.36□□□□□ -0.43
LIMS2-208ENST00000410011 IGHV3-30P01768 117 aa12.36□□□□□ -0.43
LIMS2-208ENST00000410011 IGHV3-30-5P0DP03 117 aa12.36□□□□□ -0.43
LIMS2-208ENST00000410011 NDUFA11Q86Y39 141 aa12.36□□□□□ -0.43
LIMS2-208ENST00000410011 AMELXQ99217 191 aa12.36□□□□□ -0.43
LIMS2-208ENST00000410011 SPAG8Q99932 426 aaPredicted RBP12.36□□□□□ -0.43
LIMS2-208ENST00000410011 GAGE12HA6NDE8 117 aa12.36□□□□□ -0.43
LIMS2-208ENST00000410011 TSPAN13O95857 204 aa12.36□□□□□ -0.43
LIMS2-208ENST00000410011 CFAP126Q5VTH2 177 aa12.36□□□□□ -0.43
LIMS2-208ENST00000410011 SH2D6Q7Z4S9 175 aa12.36□□□□□ -0.43
LIMS2-208ENST00000410011 TMEM170BQ5T4T1 132 aa12.35□□□□□ -0.43
LIMS2-208ENST00000410011 WFDC12Q8WWY7 111 aa12.35□□□□□ -0.43
LIMS2-208ENST00000410011 TMEM95Q3KNT9 176 aa12.34□□□□□ -0.43
LIMS2-208ENST00000410011 J3QQQ9 107 aa12.34□□□□□ -0.43
LIMS2-208ENST00000410011 P0DMU3 169 aa12.34□□□□□ -0.43
LIMS2-208ENST00000410011 FAM231AP0DMU4 169 aa12.34□□□□□ -0.43
LIMS2-208ENST00000410011 FAM231CP0DMU5 169 aa12.34□□□□□ -0.43
LIMS2-208ENST00000410011 ZNF56Q15929 161 aa12.34□□□□□ -0.43
LIMS2-208ENST00000410011 FAM74A4Q5TZK3 123 aa12.34□□□□□ -0.43
LIMS2-208ENST00000410011 C20orf203Q8NBC4 194 aa12.34□□□□□ -0.43
LIMS2-208ENST00000410011 TRGV11A0A075B6L2 103 aa12.33□□□□□ -0.44
LIMS2-208ENST00000410011 I3L3M4 83 aa12.33□□□□□ -0.44
LIMS2-208ENST00000410011 J3QLI3 93 aa12.33□□□□□ -0.44
LIMS2-208ENST00000410011 IGHV4-59P01825 116 aa12.33□□□□□ -0.44
LIMS2-208ENST00000410011 EMP1P54849 157 aa12.33□□□□□ -0.44
LIMS2-208ENST00000410011 TSPEAR-AS2P59090 65 aa12.33□□□□□ -0.44
LIMS2-208ENST00000410011 DEFB112Q30KQ8 113 aa12.33□□□□□ -0.44
LIMS2-208ENST00000410011 TSSC4Q9Y5U2 329 aaPredicted RBP12.33□□□□□ -0.44
LIMS2-208ENST00000410011 TRBV20-1A0A075B6N2 111 aa12.33□□□□□ -0.44
LIMS2-208ENST00000410011 TRAV12-2A0A075B6T6 113 aa12.33□□□□□ -0.44
LIMS2-208ENST00000410011 LEPROTO15243 131 aa12.33□□□□□ -0.44
LIMS2-208ENST00000410011 ELANEP08246 267 aa12.33□□□□□ -0.44
LIMS2-208ENST00000410011 SPTBN4Q9H254 2564 aa12.32□□□□□ -0.44
LIMS2-208ENST00000410011 TMEM223A0PJW6 202 aa12.32□□□□□ -0.44
LIMS2-208ENST00000410011 LINC01356Q8N9X3 169 aa12.32□□□□□ -0.44
LIMS2-208ENST00000410011 CFC1BP0CG36 223 aa12.32□□□□□ -0.44
LIMS2-208ENST00000410011 CFC1P0CG37 223 aa12.32□□□□□ -0.44
LIMS2-208ENST00000410011 LGALS3P17931 250 aaKnown RBP12.32□□□□□ -0.44
LIMS2-208ENST00000410011 CRYBA4P53673 196 aa12.31□□□□□ -0.44
LIMS2-208ENST00000410011 SPINK13Q1W4C9 94 aa12.31□□□□□ -0.44
LIMS2-208ENST00000410011 C10orf126Q8N4M7 172 aa12.31□□□□□ -0.44
LIMS2-208ENST00000410011 AZU1P20160 251 aa12.31□□□□□ -0.44
LIMS2-208ENST00000410011 UBE2E2Q96LR5 201 aa12.31□□□□□ -0.44
LIMS2-208ENST00000410011 C1QTNF4Q9BXJ3 329 aa12.31□□□□□ -0.44
LIMS2-208ENST00000410011 PYGO1Q9Y3Y4 419 aa12.31□□□□□ -0.44
LIMS2-208ENST00000410011 SMCPP49901 116 aaPredicted RBP12.3□□□□□ -0.44
LIMS2-208ENST00000410011 PIK3CD-AS1Q5SR53 167 aa12.3□□□□□ -0.44
LIMS2-208ENST00000410011 C10orf99Q6UWK7 81 aa12.3□□□□□ -0.44
LIMS2-208ENST00000410011 A8MTW9 85 aa12.29□□□□□ -0.44
LIMS2-208ENST00000410011 APOMO95445 188 aa12.29□□□□□ -0.44
LIMS2-208ENST00000410011 SYNJ2BPP57105 145 aa12.29□□□□□ -0.44
LIMS2-208ENST00000410011 FOXI1Q12951 378 aa12.29□□□□□ -0.44
LIMS2-208ENST00000410011 IGKV3-20P01619 116 aa12.29□□□□□ -0.44
LIMS2-208ENST00000410011 SBSPONQ8IVN8 264 aa12.29□□□□□ -0.44
LIMS2-208ENST00000410011 LOC107984156A0A0G2JMH3 177 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms