RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 KIF26BQ2KJY2 2108 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 LRCOL1A6NCL2 159 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 C10orf142B7Z368 130 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 K7EQG2 157 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 SOCS3O14543 225 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 IGLV2-14P01704 120 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 C3orf79P0CE67 100 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 C9orf153Q5TBE3 101 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 GAGE2AQ6NT46 116 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 Q6ZTI0 123 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 MUC6Q6W4X9 2439 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 HEATR1Q9H583 2144 aaKnown RBP3.79□□□□□ -1.8
SCN3A-203ENST00000409101 ALPK3Q96L96 1907 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 C18orf32Q8TCD1 76 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 MDFICQ9P1T7 246 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 CNOT1A5YKK6 2376 aaKnown RBP3.79□□□□□ -1.8
SCN3A-203ENST00000409101 ZFHX2Q9C0A1 2572 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-203ENST00000409101 DNAJC13O75165 2243 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 J3QQQ9 107 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 NCR3O14931 201 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 ZFP2Q6ZN57 461 aa3.79□□□□□ -1.8
SCN3A-203ENST00000409101 POLR3KQ9Y2Y1 108 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-203ENST00000409101 TRBV10-1A0A0K0K1A3 114 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 HIGD2BQ4VC39 106 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 MORN5Q5VZ52 161 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 CCL25O15444 150 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 NUP210LQ5VU65 1888 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 DENND4AQ7Z401 1863 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 CRYGBP07316 175 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 IGHV4-30-4P0DP06 118 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 UBE2D1P51668 147 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 REG3AQ06141 175 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 ZNF124Q15973 351 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 TRBV6-1A0A0K0K1D8 114 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 K7EN84 100 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 NANOS2P60321 138 aaKnown RBP3.78□□□□□ -1.8
SCN3A-203ENST00000409101 LGALS9BQ3B8N2 356 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 HIST1H2BLQ99880 126 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 LRRK1Q38SD2 2015 aa3.78□□□□□ -1.8
SCN3A-203ENST00000409101 UTF1Q5T230 341 aa3.78□□□□□ -1.81
SCN3A-203ENST00000409101 MRPL35Q9NZE8 188 aaKnown RBP3.78□□□□□ -1.81
SCN3A-203ENST00000409101 PHF3Q92576 2039 aaKnown RBP3.78□□□□□ -1.81
SCN3A-203ENST00000409101 PTPRSQ13332 1948 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 TPRP12270 2363 aaKnown RBP3.77□□□□□ -1.81
SCN3A-203ENST00000409101 F8VRH5 84 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 AVPP01185 164 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 IGLC2P0DOY2 106 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 HIST3H2BBQ8N257 126 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 TP53TG3Q9ULZ0 132 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 NDUFS6O75380 124 aaKnown RBP3.77□□□□□ -1.81
SCN3A-203ENST00000409101 GATA1P15976 413 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-203ENST00000409101 LINC00269Q8N2A0 174 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 PRSS47A8MTI9 375 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 NHLRC4P0CG21 123 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-203ENST00000409101 CEP192Q8TEP8 1941 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-203ENST00000409101 IGLV1-40P01703 118 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 TP53BP1Q12888 1972 aaPredicted RBP3.77□□□□□ -1.81
SCN3A-203ENST00000409101 BVES-AS1Q5T3Y7 98 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 Q8N6K4 173 aa3.77□□□□□ -1.81
SCN3A-203ENST00000409101 MED12Q93074 2177 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 ZNF106Q9H2Y7 1883 aaKnown RBP3.76□□□□□ -1.81
SCN3A-203ENST00000409101 A0A087WZ39 114 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 hADV29S1A0JD25 119 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 COLCA2A8K830 154 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 LGALS9CQ6DKI2 356 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 C20orf173Q96LM9 149 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 H7C423 109 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 KPRPQ5T749 579 aaPredicted RBP3.76□□□□□ -1.81
SCN3A-203ENST00000409101 RIF1Q5UIP0 2472 aaKnown RBP3.76□□□□□ -1.81
SCN3A-203ENST00000409101 USF3Q68DE3 2245 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 FAM167A-AS1Q96KT0 104 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 CARD19Q96LW7 228 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 SPTBN2O15020 2390 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 DIDO1Q9BTC0 2240 aaKnown RBP3.76□□□□□ -1.81
SCN3A-203ENST00000409101 ZNF407Q9C0G0 2248 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 LYPD6BQ8NI32 183 aa3.76□□□□□ -1.81
SCN3A-203ENST00000409101 TNRC6AQ8NDV7 1962 aaKnown RBP3.76□□□□□ -1.81
SCN3A-203ENST00000409101 FRMD6-AS1P0C7T7 363 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 Q6ZS46 218 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 WFDC10AQ9H1F0 79 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 C1orf229Q6ZS94 237 aaPredicted RBP3.75□□□□□ -1.81
SCN3A-203ENST00000409101 CHCHD10Q8WYQ3 142 aaPredicted RBP3.75□□□□□ -1.81
SCN3A-203ENST00000409101 DOCK9Q9BZ29 2069 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 A0A1B0GV90 55 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 NDUFB1O75438 58 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 FUSP35637 526 aaKnown RBP eCLIP3.75□□□□□ -1.81
SCN3A-203ENST00000409101 MSRB1Q9NZV6 116 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 C9JAW5 83 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 KIR3DS1Q14943 382 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 MAJINQ3KP22 176 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 RETNQ9HD89 108 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 ORMDL1Q9P0S3 153 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 PCNX2A6NKB5 2137 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 IGKV1D-37A0A075B6S9 117 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 C9JQL5 133 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 MTURNQ8N3F0 131 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 ZFAND2AQ8N6M9 145 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 ABCA4P78363 2273 aa3.75□□□□□ -1.81
SCN3A-203ENST00000409101 H3BQ85 93 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms