RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 ZNF418Q8TF45 676 aaPredicted RBP9.01□□□□□ -0.97
RBM39-206ENST00000403542 DUX5Q96PT3 197 aa9.01□□□□□ -0.97
RBM39-206ENST00000403542 CHD6Q8TD26 2715 aa9.01□□□□□ -0.97
RBM39-206ENST00000403542 TRBV7-3A0A075B6L6 115 aa9.01□□□□□ -0.97
RBM39-206ENST00000403542 IGHV1-69DA0A0B4J2H0 117 aa9.01□□□□□ -0.97
RBM39-206ENST00000403542 A0A1B0GWB2 263 aa9.01□□□□□ -0.97
RBM39-206ENST00000403542 C11orf86A6NJI1 115 aa9.01□□□□□ -0.97
RBM39-206ENST00000403542 IGHV1-69P01742 117 aa9.01□□□□□ -0.97
RBM39-206ENST00000403542 TMEM170BQ5T4T1 132 aa9.01□□□□□ -0.97
RBM39-206ENST00000403542 IGHV4-4A0A075B6R2 117 aa9□□□□□ -0.97
RBM39-206ENST00000403542 GNLYP22749 145 aa9□□□□□ -0.97
RBM39-206ENST00000403542 RRN3P1Q2M238 152 aa9□□□□□ -0.97
RBM39-206ENST00000403542 GAGE13Q4V321 117 aa9□□□□□ -0.97
RBM39-206ENST00000403542 ZFP2Q6ZN57 461 aa9□□□□□ -0.97
RBM39-206ENST00000403542 MRPL53Q96EL3 112 aaKnown RBP9□□□□□ -0.97
RBM39-206ENST00000403542 SPANXB1Q9NS25 103 aaPredicted RBP9□□□□□ -0.97
RBM39-206ENST00000403542 KLK9Q9UKQ9 250 aa9□□□□□ -0.97
RBM39-206ENST00000403542 JMJD1CQ15652 2540 aa9□□□□□ -0.97
RBM39-206ENST00000403542 HOXA3O43365 443 aaPredicted RBP9□□□□□ -0.97
RBM39-206ENST00000403542 FAM159AQ6UWV7 190 aa9□□□□□ -0.97
RBM39-206ENST00000403542 NRGNQ92686 78 aa9□□□□□ -0.97
RBM39-206ENST00000403542 PTH2Q96A98 100 aa9□□□□□ -0.97
RBM39-206ENST00000403542 CCDC168Q8NDH2 2452 aa9□□□□□ -0.97
RBM39-206ENST00000403542 FAM223BA6NKX1 122 aa8.99□□□□□ -0.97
RBM39-206ENST00000403542 SOCS3O14543 225 aa8.99□□□□□ -0.97
RBM39-206ENST00000403542 PSMB2P49721 201 aa8.99□□□□□ -0.97
RBM39-206ENST00000403542 CLEC2AQ6UVW9 174 aa8.99□□□□□ -0.97
RBM39-206ENST00000403542 FAM223AQ8IWN6 122 aa8.99□□□□□ -0.97
RBM39-206ENST00000403542 SPAG8Q99932 426 aaPredicted RBP8.99□□□□□ -0.97
RBM39-206ENST00000403542 OVOL1O14753 267 aa8.99□□□□□ -0.97
RBM39-206ENST00000403542 TSHBP01222 138 aa8.99□□□□□ -0.97
RBM39-206ENST00000403542 SAMD13Q5VXD3 122 aa8.99□□□□□ -0.97
RBM39-206ENST00000403542 MORN3Q6PF18 240 aaPredicted RBP8.99□□□□□ -0.97
RBM39-206ENST00000403542 MAPK1IP1LQ8NDC0 245 aa8.99□□□□□ -0.97
RBM39-206ENST00000403542 DOPEY1Q5JWR5 2465 aa8.99□□□□□ -0.97
RBM39-206ENST00000403542 H7C2G1 150 aa8.98□□□□□ -0.97
RBM39-206ENST00000403542 NDUFA4O00483 81 aa8.98□□□□□ -0.97
RBM39-206ENST00000403542 CRYGDP07320 174 aa8.98□□□□□ -0.97
RBM39-206ENST00000403542 SUMO4Q6EEV6 95 aa8.98□□□□□ -0.97
RBM39-206ENST00000403542 MDFICQ9P1T7 246 aa8.98□□□□□ -0.97
RBM39-206ENST00000403542 NAV2Q8IVL1 2488 aa8.98□□□□□ -0.97
RBM39-206ENST00000403542 IGHV3-73A0A0B4J1V6 119 aa8.98□□□□□ -0.97
RBM39-206ENST00000403542 PRM2P04554 102 aa8.98□□□□□ -0.97
RBM39-206ENST00000403542 PSMG4Q5JS54 123 aa8.98□□□□□ -0.97
RBM39-206ENST00000403542 HIST2H2BDQ6DRA6 164 aa8.98□□□□□ -0.97
RBM39-206ENST00000403542 TRAV12-1A0A0B4J245 112 aa8.98□□□□□ -0.97
RBM39-206ENST00000403542 SDHAF1A6NFY7 115 aa8.97□□□□□ -0.97
RBM39-206ENST00000403542 TSPEAR-AS2P59090 65 aa8.97□□□□□ -0.97
RBM39-206ENST00000403542 ZNF56Q15929 161 aa8.97□□□□□ -0.97
RBM39-206ENST00000403542 C20orf78Q9BR46 151 aa8.97□□□□□ -0.97
RBM39-206ENST00000403542 GAGE12HA6NDE8 117 aa8.97□□□□□ -0.97
RBM39-206ENST00000403542 IGHV4-30-2A0A087WSY4 118 aa8.96□□□□□ -0.97
RBM39-206ENST00000403542 F8W1H4 67 aa8.96□□□□□ -0.97
RBM39-206ENST00000403542 AVPP01185 164 aa8.96□□□□□ -0.97
RBM39-206ENST00000403542 SPINK13Q1W4C9 94 aa8.96□□□□□ -0.97
RBM39-206ENST00000403542 DAZ1Q9NQZ3 744 aaKnown RBP8.96□□□□□ -0.97
RBM39-206ENST00000403542 C19orf54Q5BKX5 351 aa8.96□□□□□ -0.98
RBM39-206ENST00000403542 LINC00315P59091 139 aa8.95□□□□□ -0.98
RBM39-206ENST00000403542 SIGMAR1Q99720 223 aa8.95□□□□□ -0.98
RBM39-206ENST00000403542 IGLV4-69A0A075B6H9 119 aa8.95□□□□□ -0.98
RBM39-206ENST00000403542 ZNRF2Q8NHG8 242 aa8.95□□□□□ -0.98
RBM39-206ENST00000403542 KIR2DL4Q99706 377 aa8.95□□□□□ -0.98
RBM39-206ENST00000403542 ZNF580Q9UK33 172 aa8.95□□□□□ -0.98
RBM39-206ENST00000403542 LENEPQ9Y5L5 61 aa8.95□□□□□ -0.98
RBM39-206ENST00000403542 ZNF462Q96JM2 2506 aa8.95□□□□□ -0.98
RBM39-206ENST00000403542 ADARB2-AS1A8MUL3 147 aa8.94□□□□□ -0.98
RBM39-206ENST00000403542 ATP5J2P56134 94 aa8.94□□□□□ -0.98
RBM39-206ENST00000403542 RNASE13Q5GAN3 156 aaKnown RBP8.94□□□□□ -0.98
RBM39-206ENST00000403542 RAX2Q96IS3 184 aa8.94□□□□□ -0.98
RBM39-206ENST00000403542 TSPAN13O95857 204 aa8.94□□□□□ -0.98
RBM39-206ENST00000403542 UCNP55089 124 aa8.94□□□□□ -0.98
RBM39-206ENST00000403542 TAL2Q16559 108 aa8.94□□□□□ -0.98
RBM39-206ENST00000403542 AKAP9Q99996 3911 aa8.94□□□□□ -0.98
RBM39-206ENST00000403542 IGHG2P01859 326 aa8.94□□□□□ -0.98
RBM39-206ENST00000403542 CCL19Q99731 98 aa8.94□□□□□ -0.98
RBM39-206ENST00000403542 KIF25-AS1Q9Y6Z4 181 aa8.94□□□□□ -0.98
RBM39-206ENST00000403542 P0DMU3 169 aa8.93□□□□□ -0.98
RBM39-206ENST00000403542 FAM231AP0DMU4 169 aa8.93□□□□□ -0.98
RBM39-206ENST00000403542 FAM231CP0DMU5 169 aa8.93□□□□□ -0.98
RBM39-206ENST00000403542 Q8N1Y9 231 aa8.93□□□□□ -0.98
RBM39-206ENST00000403542 PRO0461Q9UI25 63 aa8.93□□□□□ -0.98
RBM39-206ENST00000403542 IGHV4-59P01825 116 aa8.93□□□□□ -0.98
RBM39-206ENST00000403542 COX6B1P14854 86 aa8.93□□□□□ -0.98
RBM39-206ENST00000403542 SMCPP49901 116 aaPredicted RBP8.93□□□□□ -0.98
RBM39-206ENST00000403542 KLK9Q2XQG4 91 aa8.93□□□□□ -0.98
RBM39-206ENST00000403542 IGIPA6NJ69 53 aa8.92□□□□□ -0.98
RBM39-206ENST00000403542 NDUFS8O00217 210 aa8.92□□□□□ -0.98
RBM39-206ENST00000403542 SCGB1C2P0DMR2 95 aa8.92□□□□□ -0.98
RBM39-206ENST00000403542 SYNJ2BPP57105 145 aa8.92□□□□□ -0.98
RBM39-206ENST00000403542 PMVKQ15126 192 aa8.92□□□□□ -0.98
RBM39-206ENST00000403542 PIMREGQ9BSJ6 248 aa8.92□□□□□ -0.98
RBM39-206ENST00000403542 KNCNA6PVL3 124 aa8.92□□□□□ -0.98
RBM39-206ENST00000403542 CEMP1Q6PRD7 247 aaPredicted RBP8.92□□□□□ -0.98
RBM39-206ENST00000403542 NFE4Q86UQ8 179 aa8.92□□□□□ -0.98
RBM39-206ENST00000403542 DCANP1Q8TF63 244 aa8.92□□□□□ -0.98
RBM39-206ENST00000403542 USMG5Q96IX5 58 aa8.92□□□□□ -0.98
RBM39-206ENST00000403542 FAM19A4Q96LR4 140 aa8.92□□□□□ -0.98
RBM39-206ENST00000403542 A0A0J9YY99 117 aa8.91□□□□□ -0.98
RBM39-206ENST00000403542 J3QR89 54 aa8.91□□□□□ -0.98
RBM39-206ENST00000403542 PROK1P58294 105 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms