RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 COMMD7Q86VX2 200 aa11.93□□□□□ -0.5
PTCHD3P3-201ENST00000403073 ICOSQ9Y6W8 199 aa11.93□□□□□ -0.5
PTCHD3P3-201ENST00000403073 DNAH1Q9P2D7 4330 aa11.92□□□□□ -0.5
PTCHD3P3-201ENST00000403073 K7EQD1 137 aa11.92□□□□□ -0.5
PTCHD3P3-201ENST00000403073 CTRLP40313 264 aa11.92□□□□□ -0.5
PTCHD3P3-201ENST00000403073 CT83Q5H943 113 aa11.92□□□□□ -0.5
PTCHD3P3-201ENST00000403073 UQCC3Q6UW78 93 aa11.92□□□□□ -0.5
PTCHD3P3-201ENST00000403073 UBE2DNLQ8IWF7 75 aa11.92□□□□□ -0.5
PTCHD3P3-201ENST00000403073 C14orf178Q8N769 122 aaPredicted RBP11.92□□□□□ -0.5
PTCHD3P3-201ENST00000403073 OR10G8Q8NGN5 311 aa11.92□□□□□ -0.5
PTCHD3P3-201ENST00000403073 V9GYV3 84 aa11.92□□□□□ -0.5
PTCHD3P3-201ENST00000403073 SACSQ9NZJ4 4579 aa11.91□□□□□ -0.5
PTCHD3P3-201ENST00000403073 TRBV6-4A0A1B0GX49 114 aa11.91□□□□□ -0.5
PTCHD3P3-201ENST00000403073 LINC00862A6NCI5 91 aa11.91□□□□□ -0.5
PTCHD3P3-201ENST00000403073 RHODO00212 210 aa11.91□□□□□ -0.5
PTCHD3P3-201ENST00000403073 NTF3P20783 257 aa11.91□□□□□ -0.5
PTCHD3P3-201ENST00000403073 MRPL23Q16540 153 aaKnown RBP11.91□□□□□ -0.5
PTCHD3P3-201ENST00000403073 ESRGQ1W209 222 aa11.91□□□□□ -0.5
PTCHD3P3-201ENST00000403073 PGLYRP4Q96LB8 373 aa11.91□□□□□ -0.5
PTCHD3P3-201ENST00000403073 CCL18P55774 89 aa11.9□□□□□ -0.5
PTCHD3P3-201ENST00000403073 RNF212Q495C1 297 aa11.9□□□□□ -0.5
PTCHD3P3-201ENST00000403073 WDR73Q6P4I2 378 aa11.9□□□□□ -0.5
PTCHD3P3-201ENST00000403073 TSKUQ8WUA8 353 aa11.9□□□□□ -0.5
PTCHD3P3-201ENST00000403073 PRADC1Q9BSG0 188 aa11.9□□□□□ -0.5
PTCHD3P3-201ENST00000403073 Q9UF83 564 aa11.9□□□□□ -0.5
PTCHD3P3-201ENST00000403073 LINC00588Q9Y4M8 146 aa11.9□□□□□ -0.5
PTCHD3P3-201ENST00000403073 TMEM218A2RU14 115 aa11.89□□□□□ -0.51
PTCHD3P3-201ENST00000403073 SRIP30626 198 aa11.89□□□□□ -0.51
PTCHD3P3-201ENST00000403073 FOXA3P55318 350 aaPredicted RBP11.89□□□□□ -0.51
PTCHD3P3-201ENST00000403073 RHOHQ15669 191 aa11.89□□□□□ -0.51
PTCHD3P3-201ENST00000403073 TWIST1Q15672 202 aa11.89□□□□□ -0.51
PTCHD3P3-201ENST00000403073 LYSTQ99698 3801 aa11.89□□□□□ -0.51
PTCHD3P3-201ENST00000403073 KIF25-AS1Q9Y6Z4 181 aa11.89□□□□□ -0.51
PTCHD3P3-201ENST00000403073 SMIM17P0DL12 118 aa11.88□□□□□ -0.51
PTCHD3P3-201ENST00000403073 NEGR1Q7Z3B1 354 aa11.88□□□□□ -0.51
PTCHD3P3-201ENST00000403073 AP1S3Q96PC3 154 aa11.88□□□□□ -0.51
PTCHD3P3-201ENST00000403073 CNFNQ9BYD5 112 aa11.88□□□□□ -0.51
PTCHD3P3-201ENST00000403073 GFRA4Q9GZZ7 299 aa11.88□□□□□ -0.51
PTCHD3P3-201ENST00000403073 VPS13DQ5THJ4 4388 aa11.88□□□□□ -0.51
PTCHD3P3-201ENST00000403073 RYR2Q92736 4967 aa11.88□□□□□ -0.51
PTCHD3P3-201ENST00000403073 HIGD1CA8MV81 97 aa11.87□□□□□ -0.51
PTCHD3P3-201ENST00000403073 F5H697 171 aa11.87□□□□□ -0.51
PTCHD3P3-201ENST00000403073 ADCYAP1P18509 176 aa11.87□□□□□ -0.51
PTCHD3P3-201ENST00000403073 EVI2AP22794 236 aa11.87□□□□□ -0.51
PTCHD3P3-201ENST00000403073 LINC00315P59091 139 aa11.87□□□□□ -0.51
PTCHD3P3-201ENST00000403073 LYPD5Q6UWN5 251 aa11.87□□□□□ -0.51
PTCHD3P3-201ENST00000403073 FAM231BA6NCW3 169 aa11.86□□□□□ -0.51
PTCHD3P3-201ENST00000403073 GAGE12JA6NER3 117 aa11.86□□□□□ -0.51
PTCHD3P3-201ENST00000403073 F8W036 122 aa11.86□□□□□ -0.51
PTCHD3P3-201ENST00000403073 RAB4BP61018 213 aa11.86□□□□□ -0.51
PTCHD3P3-201ENST00000403073 GAGE1Q13065 139 aa11.86□□□□□ -0.51
PTCHD3P3-201ENST00000403073 GAGE4Q13068 117 aa11.86□□□□□ -0.51
PTCHD3P3-201ENST00000403073 GAGE5Q13069 117 aa11.86□□□□□ -0.51
PTCHD3P3-201ENST00000403073 ZNF56Q15929 161 aa11.86□□□□□ -0.51
PTCHD3P3-201ENST00000403073 GAGE13Q4V321 117 aa11.86□□□□□ -0.51
PTCHD3P3-201ENST00000403073 RYR3Q15413 4870 aa11.86□□□□□ -0.51
PTCHD3P3-201ENST00000403073 MGPP08493 103 aa11.85□□□□□ -0.51
PTCHD3P3-201ENST00000403073 TRGC1P0CF51 173 aa11.85□□□□□ -0.51
PTCHD3P3-201ENST00000403073 PNRC1Q12796 327 aaPredicted RBP11.85□□□□□ -0.51
PTCHD3P3-201ENST00000403073 NUP35Q8NFH5 326 aa11.85□□□□□ -0.51
PTCHD3P3-201ENST00000403073 BORCS7Q96B45 105 aa11.84□□□□□ -0.51
PTCHD3P3-201ENST00000403073 HYDINQ4G0P3 5121 aa11.83□□□□□ -0.51
PTCHD3P3-201ENST00000403073 IGLV2-18A0A075B6J9 118 aa11.83□□□□□ -0.52
PTCHD3P3-201ENST00000403073 SMIM27A0A1W2PRY6 76 aa11.83□□□□□ -0.52
PTCHD3P3-201ENST00000403073 FAM3BP58499 235 aaPredicted RBP11.83□□□□□ -0.52
PTCHD3P3-201ENST00000403073 ZNRF2Q8NHG8 242 aa11.83□□□□□ -0.52
PTCHD3P3-201ENST00000403073 DPH3P1Q9H4G8 78 aa11.83□□□□□ -0.52
PTCHD3P3-201ENST00000403073 NAT8BQ9UHF3 227 aa11.83□□□□□ -0.52
PTCHD3P3-201ENST00000403073 MRPS16Q9Y3D3 137 aaKnown RBP11.83□□□□□ -0.52
PTCHD3P3-201ENST00000403073 A0A1B0GUT8 65 aa11.82□□□□□ -0.52
PTCHD3P3-201ENST00000403073 SH2D6Q7Z4S9 175 aa11.82□□□□□ -0.52
PTCHD3P3-201ENST00000403073 ATP6V0E2Q8NHE4 81 aa11.82□□□□□ -0.52
PTCHD3P3-201ENST00000403073 SEC11CQ9BY50 192 aa11.82□□□□□ -0.52
PTCHD3P3-201ENST00000403073 NACAE9PAV3 2078 aa11.82□□□□□ -0.52
PTCHD3P3-201ENST00000403073 TRBV10-1A0A0K0K1A3 114 aa11.81□□□□□ -0.52
PTCHD3P3-201ENST00000403073 M0R2N4 97 aa11.81□□□□□ -0.52
PTCHD3P3-201ENST00000403073 PPP1R2P9O14990 202 aa11.81□□□□□ -0.52
PTCHD3P3-201ENST00000403073 MT-ND4LP03901 98 aa11.81□□□□□ -0.52
PTCHD3P3-201ENST00000403073 LINC00694P0DN24 101 aa11.81□□□□□ -0.52
PTCHD3P3-201ENST00000403073 SUMO4Q6EEV6 95 aa11.81□□□□□ -0.52
PTCHD3P3-201ENST00000403073 Q9H8V8 135 aa11.81□□□□□ -0.52
PTCHD3P3-201ENST00000403073 SMIM15Q7Z3B0 74 aa11.8□□□□□ -0.52
PTCHD3P3-201ENST00000403073 NEXN-AS1Q8NBZ9 246 aa11.8□□□□□ -0.52
PTCHD3P3-201ENST00000403073 UPK3BQ9BT76 320 aa11.8□□□□□ -0.52
PTCHD3P3-201ENST00000403073 M0QY20 66 aa11.79□□□□□ -0.52
PTCHD3P3-201ENST00000403073 RPL36AP83881 106 aaKnown RBP11.79□□□□□ -0.52
PTCHD3P3-201ENST00000403073 RIGQ13278 110 aa11.79□□□□□ -0.52
PTCHD3P3-201ENST00000403073 RPL36ALQ969Q0 106 aaKnown RBP11.79□□□□□ -0.52
PTCHD3P3-201ENST00000403073 ANAPC16Q96DE5 110 aa11.79□□□□□ -0.52
PTCHD3P3-201ENST00000403073 TRBV7-3A0A075B6L6 115 aa11.78□□□□□ -0.52
PTCHD3P3-201ENST00000403073 C10orf91Q5T1B1 145 aa11.78□□□□□ -0.52
PTCHD3P3-201ENST00000403073 GTSF1LQ9H1H1 148 aa11.78□□□□□ -0.52
PTCHD3P3-201ENST00000403073 TRAV26-2A0A0B4J265 109 aa11.77□□□□□ -0.53
PTCHD3P3-201ENST00000403073 TIRAPP58753 221 aa11.77□□□□□ -0.53
PTCHD3P3-201ENST00000403073 UBE2D3P61077 147 aa11.77□□□□□ -0.53
PTCHD3P3-201ENST00000403073 UBE2D2P62837 147 aa11.77□□□□□ -0.53
PTCHD3P3-201ENST00000403073 H7C1H1 209 aa11.76□□□□□ -0.53
PTCHD3P3-201ENST00000403073 RASL11AQ6T310 242 aa11.76□□□□□ -0.53
PTCHD3P3-201ENST00000403073 WFDC10BQ8IUB3 73 aa11.76□□□□□ -0.53
PTCHD3P3-201ENST00000403073 TMEM191AQ9H0A3 160 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms