RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 JPT2Q9H910 190 aa13□□□□□ -0.33
EWSR1-206ENST00000397938 LINC00527Q9UJ94 153 aa13□□□□□ -0.33
EWSR1-206ENST00000397938 ZNF292O60281 2723 aa13□□□□□ -0.33
EWSR1-206ENST00000397938 M0QXV9 152 aa12.99□□□□□ -0.33
EWSR1-206ENST00000397938 SLC25A20O43772 301 aa12.99□□□□□ -0.33
EWSR1-206ENST00000397938 SDHAF1A6NFY7 115 aa12.98□□□□□ -0.33
EWSR1-206ENST00000397938 TMEM219Q86XT9 240 aa12.98□□□□□ -0.33
EWSR1-206ENST00000397938 MED13LQ71F56 2210 aa12.98□□□□□ -0.33
EWSR1-206ENST00000397938 A4D1N5 150 aa12.98□□□□□ -0.33
EWSR1-206ENST00000397938 CCL21O00585 134 aa12.98□□□□□ -0.33
EWSR1-206ENST00000397938 NPFFO15130 113 aa12.98□□□□□ -0.33
EWSR1-206ENST00000397938 EIF4EBP3O60516 100 aaPredicted RBP12.98□□□□□ -0.33
EWSR1-206ENST00000397938 TRBV27A0A0K0K1C4 114 aa12.97□□□□□ -0.33
EWSR1-206ENST00000397938 IGHV3-33P01772 117 aa12.97□□□□□ -0.33
EWSR1-206ENST00000397938 CRIP2P52943 208 aaPredicted RBP12.97□□□□□ -0.33
EWSR1-206ENST00000397938 A0A087WWL8 130 aa12.97□□□□□ -0.33
EWSR1-206ENST00000397938 C9JAW5 83 aa12.97□□□□□ -0.33
EWSR1-206ENST00000397938 RPL11P62913 178 aaKnown RBP12.97□□□□□ -0.33
EWSR1-206ENST00000397938 ZFAND6Q6FIF0 208 aa12.97□□□□□ -0.33
EWSR1-206ENST00000397938 TMEM263Q8WUH6 116 aaKnown RBP12.97□□□□□ -0.33
EWSR1-206ENST00000397938 MOB4Q9Y3A3 225 aa12.97□□□□□ -0.33
EWSR1-206ENST00000397938 SVEP1Q4LDE5 3571 aa12.97□□□□□ -0.33
EWSR1-206ENST00000397938 TRBV6-5A0A0K0K1A5 114 aa12.96□□□□□ -0.33
EWSR1-206ENST00000397938 KLLNB2CW77 178 aa12.96□□□□□ -0.33
EWSR1-206ENST00000397938 RAX2Q96IS3 184 aa12.96□□□□□ -0.33
EWSR1-206ENST00000397938 CITED1Q99966 193 aa12.96□□□□□ -0.33
EWSR1-206ENST00000397938 ANAPC13Q9BS18 74 aa12.96□□□□□ -0.33
EWSR1-206ENST00000397938 SPTBN2O15020 2390 aa12.96□□□□□ -0.33
EWSR1-206ENST00000397938 LEPROTO15243 131 aa12.96□□□□□ -0.33
EWSR1-206ENST00000397938 TTC28Q96AY4 2481 aa12.96□□□□□ -0.33
EWSR1-206ENST00000397938 TLN1Q9Y490 2541 aaKnown RBP12.96□□□□□ -0.34
EWSR1-206ENST00000397938 A0A0B4J2C4 111 aa12.96□□□□□ -0.34
EWSR1-206ENST00000397938 F5H697 171 aa12.96□□□□□ -0.34
EWSR1-206ENST00000397938 LGALS9O00182 355 aa12.96□□□□□ -0.34
EWSR1-206ENST00000397938 FAM159AQ6UWV7 190 aa12.96□□□□□ -0.34
EWSR1-206ENST00000397938 TMEM223A0PJW6 202 aa12.95□□□□□ -0.34
EWSR1-206ENST00000397938 P0DMU3 169 aa12.95□□□□□ -0.34
EWSR1-206ENST00000397938 FAM231AP0DMU4 169 aa12.95□□□□□ -0.34
EWSR1-206ENST00000397938 FAM231CP0DMU5 169 aa12.95□□□□□ -0.34
EWSR1-206ENST00000397938 GATA3P23771 443 aa12.95□□□□□ -0.34
EWSR1-206ENST00000397938 TRPT1Q86TN4 253 aaKnown RBP12.95□□□□□ -0.34
EWSR1-206ENST00000397938 IGKV3-7A0A075B6H7 116 aa12.95□□□□□ -0.34
EWSR1-206ENST00000397938 IGHV1-69P01742 117 aa12.95□□□□□ -0.34
EWSR1-206ENST00000397938 TEX29Q8N6K0 151 aa12.95□□□□□ -0.34
EWSR1-206ENST00000397938 ADORA2A-AS1P86434 159 aa12.94□□□□□ -0.34
EWSR1-206ENST00000397938 NSUN5P1Q3KNT7 163 aa12.93□□□□□ -0.34
EWSR1-206ENST00000397938 TRAV2A0A0B4J234 112 aa12.93□□□□□ -0.34
EWSR1-206ENST00000397938 ZNF256Q9Y2P7 627 aaPredicted RBP12.93□□□□□ -0.34
EWSR1-206ENST00000397938 SRD5A1P18405 259 aa12.92□□□□□ -0.34
EWSR1-206ENST00000397938 MUSTN1Q8IVN3 82 aa12.92□□□□□ -0.34
EWSR1-206ENST00000397938 OPRPNQ99935 248 aaPredicted RBP12.92□□□□□ -0.34
EWSR1-206ENST00000397938 RHOHQ15669 191 aa12.92□□□□□ -0.34
EWSR1-206ENST00000397938 RHPN1-AS1Q9BWJ2 59 aa12.92□□□□□ -0.34
EWSR1-206ENST00000397938 H7C2G1 150 aa12.91□□□□□ -0.34
EWSR1-206ENST00000397938 ZNF22P17026 224 aaPredicted RBP12.91□□□□□ -0.34
EWSR1-206ENST00000397938 K7ENP7 123 aa12.91□□□□□ -0.34
EWSR1-206ENST00000397938 IGHV3-11P01762 117 aa12.91□□□□□ -0.34
EWSR1-206ENST00000397938 LMO4P61968 165 aa12.91□□□□□ -0.34
EWSR1-206ENST00000397938 FAM74A4Q5TZK3 123 aa12.91□□□□□ -0.34
EWSR1-206ENST00000397938 RELNP78509 3460 aa12.9□□□□□ -0.34
EWSR1-206ENST00000397938 A0A1W2PPR1 153 aa12.9□□□□□ -0.34
EWSR1-206ENST00000397938 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.9□□□□□ -0.34
EWSR1-206ENST00000397938 A0A0J9YX75 114 aa12.9□□□□□ -0.34
EWSR1-206ENST00000397938 RHODO00212 210 aa12.9□□□□□ -0.34
EWSR1-206ENST00000397938 ATXN8Q156A1 80 aa12.9□□□□□ -0.34
EWSR1-206ENST00000397938 USMG5Q96IX5 58 aa12.9□□□□□ -0.34
EWSR1-206ENST00000397938 LINC01600Q96MT4 127 aa12.9□□□□□ -0.34
EWSR1-206ENST00000397938 ASH1LQ9NR48 2969 aaKnown RBP12.9□□□□□ -0.35
EWSR1-206ENST00000397938 M0QY20 66 aa12.89□□□□□ -0.35
EWSR1-206ENST00000397938 ELANEP08246 267 aa12.89□□□□□ -0.35
EWSR1-206ENST00000397938 LINC01620Q4KN68 170 aa12.89□□□□□ -0.35
EWSR1-206ENST00000397938 NTN5Q8WTR8 489 aaPredicted RBP12.89□□□□□ -0.35
EWSR1-206ENST00000397938 IGHV3-64A0A075B6Q5 118 aa12.89□□□□□ -0.35
EWSR1-206ENST00000397938 TRAV12-3A0A0B4J271 114 aa12.89□□□□□ -0.35
EWSR1-206ENST00000397938 Q8N1Y9 231 aa12.89□□□□□ -0.35
EWSR1-206ENST00000397938 C9orf85Q96MD7 179 aa12.89□□□□□ -0.35
EWSR1-206ENST00000397938 MDFICQ9P1T7 246 aa12.89□□□□□ -0.35
EWSR1-206ENST00000397938 RIF1Q5UIP0 2472 aaKnown RBP12.89□□□□□ -0.35
EWSR1-206ENST00000397938 M0R2P5 195 aa12.88□□□□□ -0.35
EWSR1-206ENST00000397938 NHLRC4P0CG21 123 aaPredicted RBP12.88□□□□□ -0.35
EWSR1-206ENST00000397938 GAGE5Q13069 117 aa12.88□□□□□ -0.35
EWSR1-206ENST00000397938 GAGE6Q13070 117 aa12.88□□□□□ -0.35
EWSR1-206ENST00000397938 ZNF56Q15929 161 aa12.88□□□□□ -0.35
EWSR1-206ENST00000397938 BRI3O95415 125 aa12.88□□□□□ -0.35
EWSR1-206ENST00000397938 Q1RN00 199 aa12.88□□□□□ -0.35
EWSR1-206ENST00000397938 BPESC1Q9GZL8 116 aa12.88□□□□□ -0.35
EWSR1-206ENST00000397938 IGHV3-16A0A0C4DH30 117 aa12.87□□□□□ -0.35
EWSR1-206ENST00000397938 H3BUA1 57 aa12.87□□□□□ -0.35
EWSR1-206ENST00000397938 IGHV3OR16-10A0A075B7F0 116 aa12.87□□□□□ -0.35
EWSR1-206ENST00000397938 SNCGO76070 127 aa12.87□□□□□ -0.35
EWSR1-206ENST00000397938 TCF15Q12870 199 aa12.87□□□□□ -0.35
EWSR1-206ENST00000397938 C20orf203Q8NBC4 194 aa12.87□□□□□ -0.35
EWSR1-206ENST00000397938 GAGE2BQ13066 116 aa12.86□□□□□ -0.35
EWSR1-206ENST00000397938 GAGE2EQ4V326 116 aa12.86□□□□□ -0.35
EWSR1-206ENST00000397938 DAZ1Q9NQZ3 744 aaKnown RBP12.86□□□□□ -0.35
EWSR1-206ENST00000397938 GAGE2DQ9UEU5 116 aa12.86□□□□□ -0.35
EWSR1-206ENST00000397938 A0A0J9YXV3 536 aa12.86□□□□□ -0.35
EWSR1-206ENST00000397938 A0A0J9YXY3 114 aa12.86□□□□□ -0.35
EWSR1-206ENST00000397938 RPL13AP40429 203 aaKnown RBP12.86□□□□□ -0.35
EWSR1-206ENST00000397938 TRAV4A0A0B4J268 109 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms