RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 IGHV7-4-1A0A0J9YVY3 117 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 FAM72CH0Y354 149 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 SSSCA1O60232 199 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 OR1I1O60431 355 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 IGLV3-25P01717 112 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 HLA-DMBP28068 263 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 QRFPP83859 136 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 LUZP6Q538Z0 58 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 FAM72AQ5TYM5 149 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 NCBP2-AS2Q69YL0 99 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 FAM72DQ6L9T8 149 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 C2orf91Q6ZV80 131 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 FAM72BQ86X60 149 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 DAND5Q8N907 189 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 OR8A1Q8NGG7 326 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 LINC01006Q8NI28 216 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 MYOZ3Q8TDC0 251 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 LITAFQ99732 161 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 SMIM7Q9BQ49 75 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 TACC2O95359 2948 aa4.71□□□□□ -1.66
SMCO1-201ENST00000397537 PIKFYVEQ9Y2I7 2098 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 IGHV3OR15-7A0A075B7D8 119 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 IGHV5-10-1A0A0J9YXX1 117 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 TMEM256-PLSCR3K7ERE1 68 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 SLC25A14O95258 325 aaPredicted RBP4.7□□□□□ -1.66
SMCO1-201ENST00000397537 CGB3P0DN86 165 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 CGB7P0DN87 165 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 HMGA2P52926 109 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 CCL20P78556 96 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 CDK5R1Q15078 307 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 LGALS9BQ3B8N2 356 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 CFAP126Q5VTH2 177 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 LGALS9CQ6DKI2 356 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 LINC00305Q7Z4B0 112 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 ZNF329Q86UD4 541 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 CEND1Q8N111 149 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 ZNF525Q8N782 197 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 C15orf53Q8NAA6 179 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 WFDC11Q8NEX6 87 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 TMEM158Q8WZ71 300 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 RTTNQ86VV8 2226 aa4.7□□□□□ -1.66
SMCO1-201ENST00000397537 IGHV5-51A0A0C4DH38 117 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 RBAKDNA6NC62 111 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 PRM2P04554 102 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 MRPS21P82921 87 aaKnown RBP4.69□□□□□ -1.66
SMCO1-201ENST00000397537 KLHL30-AS1Q8NEE0 82 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 C1orf147Q96MC9 270 aaPredicted RBP4.69□□□□□ -1.66
SMCO1-201ENST00000397537 SLC39A9Q9NUM3 307 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 IL36BQ9NZH7 164 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 SERP1Q9Y6X1 66 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 COL6A5A8TX70 2615 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 IGHV1-58A0A0C4DH39 117 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 A0A1B0GVX0 72 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 APCSP02743 223 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 TCRAP04437 139 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 LGALS3P17931 250 aaKnown RBP4.69□□□□□ -1.66
SMCO1-201ENST00000397537 CSN1S1P47710 185 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 RPL30P62888 115 aaKnown RBP4.69□□□□□ -1.66
SMCO1-201ENST00000397537 NOXRED1Q6NXP6 359 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 GTSCR1Q86UQ5 136 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 AMN1Q8IY45 258 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 RNF182Q8N6D2 247 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 ZNF563Q8TA94 476 aa4.69□□□□□ -1.66
SMCO1-201ENST00000397537 NINQ8N4C6 2090 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 IGHV3-43A0A0B4J1X8 118 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 IGKV1-9A0A0C4DH69 117 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 ATOX1O00244 68 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 CST7O76096 145 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 HLA-DRB4P13762 266 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 UBE2AP49459 152 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 NPC2P61916 151 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 ZNF678Q5SXM1 525 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 PCP2Q8IVA1 136 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 ITLN2Q8WWU7 325 aaPredicted RBP4.68□□□□□ -1.66
SMCO1-201ENST00000397537 HIGD1BQ9P298 99 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 HLA-DRB4X5D2U9 266 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 PCNX3Q9H6A9 2034 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 CSPG4Q6UVK1 2322 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 JMJD1CQ15652 2540 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 DOCK4Q8N1I0 1966 aa4.68□□□□□ -1.66
SMCO1-201ENST00000397537 GYPBP06028 91 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 CD28P10747 220 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 COX6A1P12074 109 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 SMIM11AP58511 58 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 LINC01554Q52M75 96 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 LINC01545Q5VT33 79 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 CRIP3Q6Q6R5 217 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 ADM2Q7Z4H4 148 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 C3orf56Q8N813 242 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 WFDC5Q8TCV5 224 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 TSKUQ8WUA8 353 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 RMI2Q96E14 147 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 MGST2Q99735 147 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 KLK5Q9Y337 293 aaPredicted RBP4.67□□□□□ -1.66
SMCO1-201ENST00000397537 SCN2AQ99250 2005 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 IGHV3-49A0A0A0MS15 119 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 TRAV2A0A0B4J234 112 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 ZFP92A6NM28 416 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 IGKCP01834 107 aa4.67□□□□□ -1.66
SMCO1-201ENST00000397537 HLA-DQA1P01909 254 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms