RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 HIGD1BQ9P298 99 aa12.41□□□□□ -0.42
NUP50-202ENST00000396096 AGRNO00468 2067 aa12.41□□□□□ -0.42
NUP50-202ENST00000396096 APCP25054 2843 aa12.41□□□□□ -0.42
NUP50-202ENST00000396096 TRGV11A0A075B6L2 103 aa12.4□□□□□ -0.42
NUP50-202ENST00000396096 TCTAP57738 103 aa12.4□□□□□ -0.42
NUP50-202ENST00000396096 ZNF124Q15973 351 aa12.4□□□□□ -0.42
NUP50-202ENST00000396096 Q6ZSV7 163 aa12.4□□□□□ -0.42
NUP50-202ENST00000396096 TMEM160Q9NX00 188 aa12.4□□□□□ -0.42
NUP50-202ENST00000396096 A0A087WWL8 130 aa12.4□□□□□ -0.42
NUP50-202ENST00000396096 UBE2V1Q13404 147 aa12.4□□□□□ -0.42
NUP50-202ENST00000396096 ERASQ7Z444 233 aa12.4□□□□□ -0.42
NUP50-202ENST00000396096 VCYO14598 125 aa12.39□□□□□ -0.43
NUP50-202ENST00000396096 CRYGDP07320 174 aa12.39□□□□□ -0.43
NUP50-202ENST00000396096 DEFB131AP59861 70 aa12.39□□□□□ -0.43
NUP50-202ENST00000396096 GTSCR1Q86UQ5 136 aa12.39□□□□□ -0.43
NUP50-202ENST00000396096 DNAJC9-AS1A6NH13 148 aa12.38□□□□□ -0.43
NUP50-202ENST00000396096 CBY3A6NI87 242 aa12.38□□□□□ -0.43
NUP50-202ENST00000396096 KNCNA6PVL3 124 aa12.38□□□□□ -0.43
NUP50-202ENST00000396096 H3BMM0 161 aa12.38□□□□□ -0.43
NUP50-202ENST00000396096 TMEM61Q8N0U2 210 aa12.38□□□□□ -0.43
NUP50-202ENST00000396096 DLX4Q92988 240 aaPredicted RBP12.38□□□□□ -0.43
NUP50-202ENST00000396096 ZNF256Q9Y2P7 627 aaPredicted RBP12.38□□□□□ -0.43
NUP50-202ENST00000396096 CHTOPQ9Y3Y2 248 aaKnown RBP12.38□□□□□ -0.43
NUP50-202ENST00000396096 TRBV27A0A0K0K1C4 114 aa12.38□□□□□ -0.43
NUP50-202ENST00000396096 KLHL30-AS1Q8NEE0 82 aa12.38□□□□□ -0.43
NUP50-202ENST00000396096 BAALCQ8WXS3 180 aa12.38□□□□□ -0.43
NUP50-202ENST00000396096 F5H697 171 aa12.37□□□□□ -0.43
NUP50-202ENST00000396096 CCL25O15444 150 aa12.37□□□□□ -0.43
NUP50-202ENST00000396096 RBMY1A1P0DJD3 496 aaKnown RBP12.37□□□□□ -0.43
NUP50-202ENST00000396096 RBMY1CP0DJD4 496 aa12.37□□□□□ -0.43
NUP50-202ENST00000396096 RBMY1FQ15415 496 aaKnown RBP12.37□□□□□ -0.43
NUP50-202ENST00000396096 ZFP2Q6ZN57 461 aa12.37□□□□□ -0.43
NUP50-202ENST00000396096 CYSLTR1Q9Y271 337 aa12.37□□□□□ -0.43
NUP50-202ENST00000396096 CHD6Q8TD26 2715 aa12.37□□□□□ -0.43
NUP50-202ENST00000396096 A6NDN8 102 aa12.36□□□□□ -0.43
NUP50-202ENST00000396096 M0QY20 66 aa12.36□□□□□ -0.43
NUP50-202ENST00000396096 RIPPLY3P57055 190 aa12.36□□□□□ -0.43
NUP50-202ENST00000396096 DUX3Q96PT4 197 aa12.36□□□□□ -0.43
NUP50-202ENST00000396096 ITPR3Q14573 2671 aa12.36□□□□□ -0.43
NUP50-202ENST00000396096 SDHAF1A6NFY7 115 aa12.36□□□□□ -0.43
NUP50-202ENST00000396096 PTTG1IPP53801 180 aa12.36□□□□□ -0.43
NUP50-202ENST00000396096 DEFB114Q30KQ6 69 aa12.36□□□□□ -0.43
NUP50-202ENST00000396096 KHDC1LQ5JSQ8 128 aa12.36□□□□□ -0.43
NUP50-202ENST00000396096 NEGR1Q7Z3B1 354 aa12.36□□□□□ -0.43
NUP50-202ENST00000396096 JMJD8Q96S16 334 aa12.36□□□□□ -0.43
NUP50-202ENST00000396096 KIR2DL4Q99706 377 aa12.36□□□□□ -0.43
NUP50-202ENST00000396096 RBMY1BA6NDE4 496 aaKnown RBP12.35□□□□□ -0.43
NUP50-202ENST00000396096 RBMY1EA6NEQ0 496 aaKnown RBP12.35□□□□□ -0.43
NUP50-202ENST00000396096 RBMY1DP0C7P1 496 aaKnown RBP12.35□□□□□ -0.43
NUP50-202ENST00000396096 MORN3Q6PF18 240 aaPredicted RBP12.35□□□□□ -0.43
NUP50-202ENST00000396096 DYNLRB2Q8TF09 96 aa12.35□□□□□ -0.43
NUP50-202ENST00000396096 SPAG8Q99932 426 aaPredicted RBP12.35□□□□□ -0.43
NUP50-202ENST00000396096 MAP6D1Q9H9H5 199 aa12.35□□□□□ -0.43
NUP50-202ENST00000396096 IGIPA6NJ69 53 aa12.34□□□□□ -0.43
NUP50-202ENST00000396096 KRTAP1-1Q07627 177 aa12.34□□□□□ -0.43
NUP50-202ENST00000396096 ZNF876PQ49A33 203 aa12.34□□□□□ -0.43
NUP50-202ENST00000396096 FAM74A4Q5TZK3 123 aa12.34□□□□□ -0.43
NUP50-202ENST00000396096 TRPT1Q86TN4 253 aaKnown RBP12.34□□□□□ -0.43
NUP50-202ENST00000396096 EDA2RQ9HAV5 297 aa12.34□□□□□ -0.43
NUP50-202ENST00000396096 TRBV25-1A0A075B6N4 114 aa12.34□□□□□ -0.43
NUP50-202ENST00000396096 PRSS29PA6NIE9 313 aa12.34□□□□□ -0.43
NUP50-202ENST00000396096 H3BRM9 83 aa12.34□□□□□ -0.43
NUP50-202ENST00000396096 ZNF56Q15929 161 aa12.34□□□□□ -0.43
NUP50-202ENST00000396096 TMEM141Q96I45 108 aa12.34□□□□□ -0.43
NUP50-202ENST00000396096 LINC00467Q9BRT7 94 aa12.34□□□□□ -0.43
NUP50-202ENST00000396096 TTTY13Q9BZ97 58 aa12.34□□□□□ -0.43
NUP50-202ENST00000396096 SORL1Q92673 2214 aa12.33□□□□□ -0.44
NUP50-202ENST00000396096 FHL3Q13643 280 aa12.33□□□□□ -0.44
NUP50-202ENST00000396096 VAMP3Q15836 100 aa12.33□□□□□ -0.44
NUP50-202ENST00000396096 PIK3CD-AS1Q5SR53 167 aa12.33□□□□□ -0.44
NUP50-202ENST00000396096 PTH2Q96A98 100 aa12.33□□□□□ -0.44
NUP50-202ENST00000396096 CLUHP3Q96NS8 147 aa12.33□□□□□ -0.44
NUP50-202ENST00000396096 TIMM17AQ99595 171 aa12.33□□□□□ -0.44
NUP50-202ENST00000396096 CHAC1Q9BUX1 264 aa12.33□□□□□ -0.44
NUP50-202ENST00000396096 ESM1Q9NQ30 184 aa12.33□□□□□ -0.44
NUP50-202ENST00000396096 TP53TG1Q9Y2A0 90 aa12.33□□□□□ -0.44
NUP50-202ENST00000396096 TRAV25A0A0B4J276 109 aa12.32□□□□□ -0.44
NUP50-202ENST00000396096 TSHBP01222 138 aa12.32□□□□□ -0.44
NUP50-202ENST00000396096 RHOHQ15669 191 aa12.32□□□□□ -0.44
NUP50-202ENST00000396096 RAX2Q96IS3 184 aa12.32□□□□□ -0.44
NUP50-202ENST00000396096 PLA2G2AP14555 144 aa12.31□□□□□ -0.44
NUP50-202ENST00000396096 NSUN5P1Q3KNT7 163 aa12.31□□□□□ -0.44
NUP50-202ENST00000396096 HIST2H2BCQ6DN03 193 aa12.31□□□□□ -0.44
NUP50-202ENST00000396096 CD300EQ496F6 205 aaPredicted RBP12.31□□□□□ -0.44
NUP50-202ENST00000396096 MAPKAPK5-AS1Q8N8E1 139 aa12.31□□□□□ -0.44
NUP50-202ENST00000396096 MYO9AB2RTY4 2548 aa12.3□□□□□ -0.44
NUP50-202ENST00000396096 TAL2Q16559 108 aa12.29□□□□□ -0.44
NUP50-202ENST00000396096 PAPPA-AS1Q5QFB9 102 aa12.29□□□□□ -0.44
NUP50-202ENST00000396096 TRAV8-6A0A0B4J262 113 aa12.29□□□□□ -0.44
NUP50-202ENST00000396096 C9orf118A6NHY6 69 aa12.29□□□□□ -0.44
NUP50-202ENST00000396096 E9PLD3 99 aa12.29□□□□□ -0.44
NUP50-202ENST00000396096 J3QKU1 62 aa12.29□□□□□ -0.44
NUP50-202ENST00000396096 PMVKQ15126 192 aa12.29□□□□□ -0.44
NUP50-202ENST00000396096 TM2D2Q9BX73 214 aa12.29□□□□□ -0.44
NUP50-202ENST00000396096 C16orf95Q9H693 158 aa12.29□□□□□ -0.44
NUP50-202ENST00000396096 OR11H12B2RN74 326 aa12.28□□□□□ -0.44
NUP50-202ENST00000396096 M0R2P5 195 aa12.28□□□□□ -0.44
NUP50-202ENST00000396096 RPL39P62891 51 aaKnown RBP12.28□□□□□ -0.44
NUP50-202ENST00000396096 ZNF415Q09FC8 603 aa12.28□□□□□ -0.44
NUP50-202ENST00000396096 AMMECR1LQ6DCA0 310 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms