RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 RAB19A4D1S5 217 aa20.85■□□□□ 0.93
CMTM4-202ENST00000394106 Q9UF83 564 aa20.85■□□□□ 0.93
CMTM4-202ENST00000394106 IGHV3-38A0A0C4DH36 116 aa20.84■□□□□ 0.93
CMTM4-202ENST00000394106 C16orf90A8MZG2 172 aa20.84■□□□□ 0.93
CMTM4-202ENST00000394106 CRYGDP07320 174 aa20.84■□□□□ 0.93
CMTM4-202ENST00000394106 CXCL1P09341 107 aa20.84■□□□□ 0.93
CMTM4-202ENST00000394106 MED9Q9NWA0 146 aa20.84■□□□□ 0.93
CMTM4-202ENST00000394106 MSRB1Q9NZV6 116 aa20.84■□□□□ 0.93
CMTM4-202ENST00000394106 DNAH11Q96DT5 4516 aa20.83■□□□□ 0.93
CMTM4-202ENST00000394106 DYNC1H1Q14204 4646 aaKnown RBP20.83■□□□□ 0.93
CMTM4-202ENST00000394106 K7EP13 123 aa20.83■□□□□ 0.93
CMTM4-202ENST00000394106 GNG4P50150 75 aa20.83■□□□□ 0.93
CMTM4-202ENST00000394106 LELP1Q5T871 98 aa20.83■□□□□ 0.93
CMTM4-202ENST00000394106 ALKAL2Q6UX46 152 aa20.83■□□□□ 0.93
CMTM4-202ENST00000394106 SPATA12Q7Z6I5 190 aa20.83■□□□□ 0.93
CMTM4-202ENST00000394106 OR10AG1Q8NH19 301 aa20.83■□□□□ 0.93
CMTM4-202ENST00000394106 VAX2Q9UIW0 290 aa20.83■□□□□ 0.93
CMTM4-202ENST00000394106 A0A1B0GVG6 124 aa20.82■□□□□ 0.92
CMTM4-202ENST00000394106 NFE4Q86UQ8 179 aa20.82■□□□□ 0.92
CMTM4-202ENST00000394106 MUC21A0A0G2JKD1 596 aa20.81■□□□□ 0.92
CMTM4-202ENST00000394106 MUC21A0A140T8X8 626 aa20.81■□□□□ 0.92
CMTM4-202ENST00000394106 LINC00694P0DN24 101 aa20.81■□□□□ 0.92
CMTM4-202ENST00000394106 C10orf126Q8N4M7 172 aa20.81■□□□□ 0.92
CMTM4-202ENST00000394106 IGLV2-8P01709 118 aa20.8■□□□□ 0.92
CMTM4-202ENST00000394106 DAZAP1Q96EP5 407 aaKnown RBP20.8■□□□□ 0.92
CMTM4-202ENST00000394106 SNAI2O43623 268 aa20.79■□□□□ 0.92
CMTM4-202ENST00000394106 NKX2-5P52952 324 aaPredicted RBP20.79■□□□□ 0.92
CMTM4-202ENST00000394106 SSTP61278 116 aa20.79■□□□□ 0.92
CMTM4-202ENST00000394106 LINC01556Q5JQF7 62 aa20.79■□□□□ 0.92
CMTM4-202ENST00000394106 TAGLN2P37802 199 aaKnown RBP20.78■□□□□ 0.92
CMTM4-202ENST00000394106 SPANXN1Q5VSR9 72 aa20.78■□□□□ 0.92
CMTM4-202ENST00000394106 SSBP4Q9BWG4 385 aaPredicted RBP20.78■□□□□ 0.92
CMTM4-202ENST00000394106 IGHV3-30P01768 117 aa20.77■□□□□ 0.92
CMTM4-202ENST00000394106 IGHV3-33P01772 117 aa20.77■□□□□ 0.92
CMTM4-202ENST00000394106 OR5AL1P0C617 328 aa20.77■□□□□ 0.92
CMTM4-202ENST00000394106 IGHV3-30-3P0DP02 117 aa20.77■□□□□ 0.92
CMTM4-202ENST00000394106 IGHV3-30-5P0DP03 117 aa20.77■□□□□ 0.92
CMTM4-202ENST00000394106 PCLOQ9Y6V0 5065 aa20.77■□□□□ 0.92
CMTM4-202ENST00000394106 BLOC1S1P78537 153 aa20.76■□□□□ 0.91
CMTM4-202ENST00000394106 SMIM12Q96EX1 92 aa20.76■□□□□ 0.91
CMTM4-202ENST00000394106 BOLA1Q9Y3E2 137 aa20.76■□□□□ 0.91
CMTM4-202ENST00000394106 TRBV20OR9-2A0A075B6H5 130 aa20.75■□□□□ 0.91
CMTM4-202ENST00000394106 GZMBP10144 247 aa20.75■□□□□ 0.91
CMTM4-202ENST00000394106 KRTAP10-2P60368 255 aa20.75■□□□□ 0.91
CMTM4-202ENST00000394106 OR2D3Q8NGH3 330 aa20.75■□□□□ 0.91
CMTM4-202ENST00000394106 ERVFC1-1P60608 527 aa20.74■□□□□ 0.91
CMTM4-202ENST00000394106 ZNF56Q15929 161 aa20.74■□□□□ 0.91
CMTM4-202ENST00000394106 TPPP3Q9BW30 176 aa20.74■□□□□ 0.91
CMTM4-202ENST00000394106 C19orf71A6NCJ1 209 aa20.73■□□□□ 0.91
CMTM4-202ENST00000394106 RPS20P60866 119 aaKnown RBP20.72■□□□□ 0.91
CMTM4-202ENST00000394106 EREGO14944 169 aa20.71■□□□□ 0.91
CMTM4-202ENST00000394106 P01737 135 aa20.71■□□□□ 0.91
CMTM4-202ENST00000394106 RAB4BP61018 213 aa20.71■□□□□ 0.91
CMTM4-202ENST00000394106 BIN3Q9NQY0 253 aa20.71■□□□□ 0.91
CMTM4-202ENST00000394106 A0A087WWC5 75 aa20.7■□□□□ 0.9
CMTM4-202ENST00000394106 TRBV10-1A0A0K0K1A3 114 aa20.7■□□□□ 0.9
CMTM4-202ENST00000394106 RPL36AP83881 106 aaKnown RBP20.7■□□□□ 0.9
CMTM4-202ENST00000394106 FER1L6-AS1Q8NA97 138 aa20.7■□□□□ 0.9
CMTM4-202ENST00000394106 RPL36ALQ969Q0 106 aaKnown RBP20.7■□□□□ 0.9
CMTM4-202ENST00000394106 RBFOX3A6NFN3 312 aa20.69■□□□□ 0.9
CMTM4-202ENST00000394106 IBA57-AS1B1ANH7 110 aa20.69■□□□□ 0.9
CMTM4-202ENST00000394106 Q8N3U1 123 aa20.69■□□□□ 0.9
CMTM4-202ENST00000394106 Q9HAA7 133 aa20.69■□□□□ 0.9
CMTM4-202ENST00000394106 F5H697 171 aa20.68■□□□□ 0.9
CMTM4-202ENST00000394106 IGLC6P0CF74 106 aa20.68■□□□□ 0.9
CMTM4-202ENST00000394106 SMIM17P0DL12 118 aa20.67■□□□□ 0.9
CMTM4-202ENST00000394106 AP1S3Q96PC3 154 aa20.67■□□□□ 0.9
CMTM4-202ENST00000394106 TRBV7-3A0A075B6L6 115 aa20.66■□□□□ 0.9
CMTM4-202ENST00000394106 A0A087WTM6 91 aa20.66■□□□□ 0.9
CMTM4-202ENST00000394106 XKRY2A2RUG3 117 aa20.66■□□□□ 0.9
CMTM4-202ENST00000394106 PSCAO43653 123 aa20.65■□□□□ 0.9
CMTM4-202ENST00000394106 UBE2D3P61077 147 aa20.65■□□□□ 0.9
CMTM4-202ENST00000394106 UBE2D2P62837 147 aa20.65■□□□□ 0.9
CMTM4-202ENST00000394106 LYPD6BQ8NI32 183 aa20.65■□□□□ 0.9
CMTM4-202ENST00000394106 FUSP35637 526 aaKnown RBP eCLIP20.64■□□□□ 0.89
CMTM4-202ENST00000394106 NUDT10Q8NFP7 164 aa20.64■□□□□ 0.89
CMTM4-202ENST00000394106 NUDT11Q96G61 164 aa20.64■□□□□ 0.89
CMTM4-202ENST00000394106 NEXN-AS1Q8NBZ9 246 aa20.63■□□□□ 0.89
CMTM4-202ENST00000394106 OR10G8Q8NGN5 311 aa20.63■□□□□ 0.89
CMTM4-202ENST00000394106 OCC1Q8TAD7 63 aa20.63■□□□□ 0.89
CMTM4-202ENST00000394106 KIF25-AS1Q9Y6Z4 181 aa20.63■□□□□ 0.89
CMTM4-202ENST00000394106 CEBPGP53567 150 aa20.62■□□□□ 0.89
CMTM4-202ENST00000394106 CACNG7P62955 275 aa20.62■□□□□ 0.89
CMTM4-202ENST00000394106 TMEM250H0YL14 139 aa20.61■□□□□ 0.89
CMTM4-202ENST00000394106 K7EN84 100 aa20.61■□□□□ 0.89
CMTM4-202ENST00000394106 TOR2AQ5JU69 321 aa20.61■□□□□ 0.89
CMTM4-202ENST00000394106 DAZ4Q86SG3 579 aaKnown RBP20.61■□□□□ 0.89
CMTM4-202ENST00000394106 RNASE7Q9H1E1 156 aaKnown RBP20.61■□□□□ 0.89
CMTM4-202ENST00000394106 DAZ3Q9NR90 486 aaKnown RBP20.61■□□□□ 0.89
CMTM4-202ENST00000394106 MGPP08493 103 aa20.6■□□□□ 0.89
CMTM4-202ENST00000394106 LAGE3Q14657 143 aa20.6■□□□□ 0.89
CMTM4-202ENST00000394106 LYZL1Q6UWQ5 148 aa20.6■□□□□ 0.89
CMTM4-202ENST00000394106 PGPEP1Q9NXJ5 209 aa20.6■□□□□ 0.89
CMTM4-202ENST00000394106 URGCP-MRPS24S4R325 110 aa20.6■□□□□ 0.89
CMTM4-202ENST00000394106 F2Z2F3 143 aa20.59■□□□□ 0.89
CMTM4-202ENST00000394106 EIF5A2Q9GZV4 153 aaKnown RBP20.59■□□□□ 0.89
CMTM4-202ENST00000394106 RPP21Q9H633 154 aaKnown RBP20.59■□□□□ 0.89
CMTM4-202ENST00000394106 RYR1P21817 5038 aa20.58■□□□□ 0.89
CMTM4-202ENST00000394106 CDK2AP2O75956 126 aa20.58■□□□□ 0.89
CMTM4-202ENST00000394106 NIT1Q86X76 327 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms