RNA–Protein interactions for RNA: ENST00000393579.2

PCNPP3-201, Transcript of PEST containing nuclear protein pseudogene 3, humanhuman

BASIC

Gene PCNPP3, Length 471 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP3-201ENST00000393579 STX19Q8N4C7 294 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 Q8N8P6 123 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 ATP6V0E2Q8NHE4 81 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 MAGOHBQ96A72 148 aaKnown RBP-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 ATP6V1G3Q96LB4 118 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 CARD19Q96LW7 228 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 PHB2Q99623 299 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 PAIP2Q9BPZ3 127 aaKnown RBP-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 SLC35B3Q9H1N7 401 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 TAF9BQ9HBM6 251 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 MRPL40Q9NQ50 206 aaKnown RBP-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 RPRMQ9NS64 109 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 FKBP11Q9NYL4 201 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 METTL1Q9UBP6 276 aaKnown RBP-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 PRNDQ9UKY0 176 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 ARL2BPQ9Y2Y0 163 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 NDUFAF1Q9Y375 327 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 NOP16Q9Y3C1 178 aaKnown RBP-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 UHRF1BP1LA0JNW5 1464 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 POLA1P09884 1462 aaPredicted RBP-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 GOLGA3Q08378 1498 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 SNAPC4Q5SXM2 1469 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 SPTA1P02549 2419 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 VWFP04275 2813 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 COL24A1Q17RW2 1714 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 ZGRF1Q86YA3 2104 aa-0.44□□□□□ -2.48
PCNPP3-201ENST00000393579 IBTKQ9P2D0 1353 aaPredicted RBP-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 MED23Q9ULK4 1368 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 EPG5Q9HCE0 2579 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 UBR4Q5T4S7 5183 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 SIP14410 1827 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 EPPK1P58107 5090 aaKnown RBP-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 TRPM1Q7Z4N2 1603 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 FAM135BQ49AJ0 1406 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 MYOM3Q5VTT5 1437 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 CD109Q6YHK3 1445 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 CCDC141Q6ZP82 1450 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 ARAP1Q96P48 1450 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 PIGBOS1A0A0B4J2F0 54 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 TRBV7-6A0A0J9YX20 115 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 CTXND1A0A1B0GTU2 59 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 TRDV1A0A1B0GX56 115 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 CPSF4LA6NMK7 179 aaKnown RBP-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 F8VRH5 84 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 J3QLW9 94 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 ARPC5O15511 151 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 SMIM24O75264 130 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 ATG12O94817 140 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 TPM3P06753 285 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 SPTBP11277 2137 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 CRYGSP22914 178 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 TPPP2P59282 170 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 NPC2P61916 151 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 GNG5P63218 68 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 TPM4P67936 248 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 COTL1Q14019 142 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 SPANXN1Q5VSR9 72 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 PPP1R2P3Q6NXS1 205 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 TMEM91Q6ZNR0 172 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 ATP11AUNQ6ZP68 121 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 ZNF818PQ6ZRF7 136 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 SNX29P2Q8IUI4 249 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 OR13C6PQ8NH95 151 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 VSTM2AQ8TAG5 236 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 C9orf16Q9BUW7 83 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 NAA60Q9H7X0 242 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 OTORQ9NRC9 128 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 APLNQ9ULZ1 77 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 SPTBN1Q01082 2364 aaKnown RBP-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 FAT2Q9NYQ8 4349 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 DLC1Q96QB1 1528 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 DOCK4Q8N1I0 1966 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 LAMB1P07942 1786 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 FRMPD1Q5SYB0 1578 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 KIF13BQ9NQT8 1826 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 TGP01266 2768 aa-0.45□□□□□ -2.48
PCNPP3-201ENST00000393579 BIRC6Q9NR09 4857 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 MYO18BQ8IUG5 2567 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 MAP1AP78559 2803 aaPredicted RBP-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 PI4KAP42356 2102 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 TECPR2O15040 1411 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 LAMA3Q16787 3333 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 ANKRD50Q9ULJ7 1429 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 KIAA1109Q2LD37 5005 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 CTTNBP2Q8WZ74 1663 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 VPS13DQ5THJ4 4388 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 MRC1P22897 1456 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 SHANK2Q9UPX8 1470 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 CASP8AP2Q9UKL3 1982 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 KIAA0100Q14667 2235 aaKnown RBP-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 FANCMQ8IYD8 2048 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 ZMYM4Q5VZL5 1548 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 PPP5D1E7EU14 171 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 GABARAPH6UMI1 98 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 M0R135 149 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 UQCR11O14957 56 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 PPP1R17O96001 155 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 RPS17P08708 135 aaKnown RBP-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 CST2P09228 141 aa-0.46□□□□□ -2.48
PCNPP3-201ENST00000393579 RPL22P35268 128 aaKnown RBP-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms