RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 COX6B1P14854 86 aa13.54□□□□□ -0.24
ERCC2-201ENST00000391941 CFAP126Q5VTH2 177 aa13.54□□□□□ -0.24
ERCC2-201ENST00000391941 LINC00477Q96M19 166 aa13.54□□□□□ -0.24
ERCC2-201ENST00000391941 ATP6V0BQ99437 205 aa13.54□□□□□ -0.24
ERCC2-201ENST00000391941 CKS1BP61024 79 aa13.53□□□□□ -0.24
ERCC2-201ENST00000391941 CDIP1Q9H305 208 aa13.53□□□□□ -0.24
ERCC2-201ENST00000391941 POLQO75417 2590 aa13.52□□□□□ -0.24
ERCC2-201ENST00000391941 FLNCQ14315 2725 aa13.52□□□□□ -0.24
ERCC2-201ENST00000391941 TRAV12-3A0A0B4J271 114 aa13.52□□□□□ -0.24
ERCC2-201ENST00000391941 NPFFO15130 113 aa13.52□□□□□ -0.24
ERCC2-201ENST00000391941 TCL1BO95988 128 aa13.52□□□□□ -0.24
ERCC2-201ENST00000391941 ZNRF2Q8NHG8 242 aa13.52□□□□□ -0.24
ERCC2-201ENST00000391941 LENEPQ9Y5L5 61 aa13.52□□□□□ -0.24
ERCC2-201ENST00000391941 ADARB2-AS1A8MUL3 147 aa13.51□□□□□ -0.25
ERCC2-201ENST00000391941 BLCAPP62952 87 aa13.51□□□□□ -0.25
ERCC2-201ENST00000391941 CARD19Q96LW7 228 aa13.51□□□□□ -0.25
ERCC2-201ENST00000391941 XGP55808 180 aa13.51□□□□□ -0.25
ERCC2-201ENST00000391941 DLX4Q92988 240 aaPredicted RBP13.51□□□□□ -0.25
ERCC2-201ENST00000391941 USP9YO00507 2555 aaPredicted RBP13.51□□□□□ -0.25
ERCC2-201ENST00000391941 CRIP2P52943 208 aaPredicted RBP13.5□□□□□ -0.25
ERCC2-201ENST00000391941 SUMO4Q6EEV6 95 aa13.5□□□□□ -0.25
ERCC2-201ENST00000391941 A0A0J9YY99 117 aa13.5□□□□□ -0.25
ERCC2-201ENST00000391941 CD7P09564 240 aa13.5□□□□□ -0.25
ERCC2-201ENST00000391941 SCGB1A1P11684 91 aa13.5□□□□□ -0.25
ERCC2-201ENST00000391941 C1QTNF4Q9BXJ3 329 aa13.5□□□□□ -0.25
ERCC2-201ENST00000391941 NOTCH3Q9UM47 2321 aa13.49□□□□□ -0.25
ERCC2-201ENST00000391941 TRAV26-1A0A087WT03 109 aa13.49□□□□□ -0.25
ERCC2-201ENST00000391941 SOCS3O14543 225 aa13.49□□□□□ -0.25
ERCC2-201ENST00000391941 CFC1BP0CG36 223 aa13.49□□□□□ -0.25
ERCC2-201ENST00000391941 CFC1P0CG37 223 aa13.49□□□□□ -0.25
ERCC2-201ENST00000391941 UBE2D1P51668 147 aa13.49□□□□□ -0.25
ERCC2-201ENST00000391941 LINC00315P59091 139 aa13.49□□□□□ -0.25
ERCC2-201ENST00000391941 SPINK8P0C7L1 97 aa13.49□□□□□ -0.25
ERCC2-201ENST00000391941 TRPT1Q86TN4 253 aaKnown RBP13.49□□□□□ -0.25
ERCC2-201ENST00000391941 NDUFA11Q86Y39 141 aa13.49□□□□□ -0.25
ERCC2-201ENST00000391941 LMO4P61968 165 aa13.48□□□□□ -0.25
ERCC2-201ENST00000391941 RHPN1-AS1Q9BWJ2 59 aa13.48□□□□□ -0.25
ERCC2-201ENST00000391941 OVOL1O14753 267 aa13.48□□□□□ -0.25
ERCC2-201ENST00000391941 PRM2P04554 102 aa13.48□□□□□ -0.25
ERCC2-201ENST00000391941 SCGB1C2P0DMR2 95 aa13.48□□□□□ -0.25
ERCC2-201ENST00000391941 EIF4EBP3O60516 100 aaPredicted RBP13.47□□□□□ -0.25
ERCC2-201ENST00000391941 MDFICQ9P1T7 246 aa13.47□□□□□ -0.25
ERCC2-201ENST00000391941 HTN1P15515 57 aa13.47□□□□□ -0.25
ERCC2-201ENST00000391941 GATA3P23771 443 aa13.47□□□□□ -0.25
ERCC2-201ENST00000391941 RNASE13Q5GAN3 156 aaKnown RBP13.47□□□□□ -0.25
ERCC2-201ENST00000391941 SDHAF1A6NFY7 115 aa13.46□□□□□ -0.25
ERCC2-201ENST00000391941 IGIPA6NJ69 53 aa13.46□□□□□ -0.25
ERCC2-201ENST00000391941 ELANEP08246 267 aa13.46□□□□□ -0.25
ERCC2-201ENST00000391941 IGHV4-38-2P0DP08 117 aa13.46□□□□□ -0.25
ERCC2-201ENST00000391941 C10orf99Q6UWK7 81 aa13.46□□□□□ -0.25
ERCC2-201ENST00000391941 BEX4Q9NWD9 120 aaPredicted RBP13.46□□□□□ -0.25
ERCC2-201ENST00000391941 IGHV3-73A0A0B4J1V6 119 aa13.46□□□□□ -0.25
ERCC2-201ENST00000391941 FAM223BA6NKX1 122 aa13.46□□□□□ -0.25
ERCC2-201ENST00000391941 C19orf54Q5BKX5 351 aa13.46□□□□□ -0.25
ERCC2-201ENST00000391941 FAM223AQ8IWN6 122 aa13.46□□□□□ -0.25
ERCC2-201ENST00000391941 KIF25-AS1Q9Y6Z4 181 aa13.46□□□□□ -0.26
ERCC2-201ENST00000391941 MXRA5Q9NR99 2828 aa13.45□□□□□ -0.26
ERCC2-201ENST00000391941 A0A1B0GV72 72 aa13.45□□□□□ -0.26
ERCC2-201ENST00000391941 FAM19A4Q96LR4 140 aa13.45□□□□□ -0.26
ERCC2-201ENST00000391941 MOB4Q9Y3A3 225 aa13.45□□□□□ -0.26
ERCC2-201ENST00000391941 NACAE9PAV3 2078 aa13.45□□□□□ -0.26
ERCC2-201ENST00000391941 TRAV2A0A0B4J234 112 aa13.44□□□□□ -0.26
ERCC2-201ENST00000391941 IGHV3-30P01768 117 aa13.44□□□□□ -0.26
ERCC2-201ENST00000391941 ZNF688P0C7X2 276 aa13.44□□□□□ -0.26
ERCC2-201ENST00000391941 IGHV3-30-5P0DP03 117 aa13.44□□□□□ -0.26
ERCC2-201ENST00000391941 NIPBLQ6KC79 2804 aaeCLIP13.44□□□□□ -0.26
ERCC2-201ENST00000391941 NDUFA4O00483 81 aa13.44□□□□□ -0.26
ERCC2-201ENST00000391941 NPC2P61916 151 aa13.44□□□□□ -0.26
ERCC2-201ENST00000391941 FAM159AQ6UWV7 190 aa13.44□□□□□ -0.26
ERCC2-201ENST00000391941 ANKRD29Q8N6D5 301 aa13.44□□□□□ -0.26
ERCC2-201ENST00000391941 GEMIN7Q9H840 131 aaKnown RBP13.44□□□□□ -0.26
ERCC2-201ENST00000391941 CFAP46Q8IYW2 2715 aa13.43□□□□□ -0.26
ERCC2-201ENST00000391941 CEMP1Q6PRD7 247 aaPredicted RBP13.43□□□□□ -0.26
ERCC2-201ENST00000391941 SHISA2Q6UWI4 295 aa13.43□□□□□ -0.26
ERCC2-201ENST00000391941 UBE2D3P61077 147 aa13.43□□□□□ -0.26
ERCC2-201ENST00000391941 UBE2D2P62837 147 aa13.43□□□□□ -0.26
ERCC2-201ENST00000391941 PMVKQ15126 192 aa13.43□□□□□ -0.26
ERCC2-201ENST00000391941 ZNF56Q15929 161 aa13.43□□□□□ -0.26
ERCC2-201ENST00000391941 AKAP9Q99996 3911 aa13.43□□□□□ -0.26
ERCC2-201ENST00000391941 C2CD3Q4AC94 2353 aa13.43□□□□□ -0.26
ERCC2-201ENST00000391941 H3BUX3 64 aa13.42□□□□□ -0.26
ERCC2-201ENST00000391941 MED14OSP0DP75 135 aa13.42□□□□□ -0.26
ERCC2-201ENST00000391941 A4D1N5 150 aa13.42□□□□□ -0.26
ERCC2-201ENST00000391941 C19orf84I3L1E1 186 aa13.42□□□□□ -0.26
ERCC2-201ENST00000391941 PPP1R17O96001 155 aa13.42□□□□□ -0.26
ERCC2-201ENST00000391941 P0DMU3 169 aa13.42□□□□□ -0.26
ERCC2-201ENST00000391941 FAM231AP0DMU4 169 aa13.42□□□□□ -0.26
ERCC2-201ENST00000391941 FAM231CP0DMU5 169 aa13.42□□□□□ -0.26
ERCC2-201ENST00000391941 Q6ZSV7 163 aa13.42□□□□□ -0.26
ERCC2-201ENST00000391941 Q6ZUT4 128 aa13.42□□□□□ -0.26
ERCC2-201ENST00000391941 DUX5Q96PT3 197 aa13.42□□□□□ -0.26
ERCC2-201ENST00000391941 FBN2P35556 2912 aa13.42□□□□□ -0.26
ERCC2-201ENST00000391941 Q9UF83 564 aa13.42□□□□□ -0.26
ERCC2-201ENST00000391941 AMELXQ99217 191 aa13.41□□□□□ -0.26
ERCC2-201ENST00000391941 A8MZ25 164 aa13.41□□□□□ -0.26
ERCC2-201ENST00000391941 J3QQQ9 107 aa13.41□□□□□ -0.26
ERCC2-201ENST00000391941 POLR2KP53803 58 aaKnown RBP13.41□□□□□ -0.26
ERCC2-201ENST00000391941 LY6DQ14210 128 aa13.41□□□□□ -0.26
ERCC2-201ENST00000391941 APRG1Q8IVJ8 170 aa13.41□□□□□ -0.26
ERCC2-201ENST00000391941 C9JAW5 83 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms