RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 CCDC179H3BU77 68 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 M0R2P5 195 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 TFF1P04155 84 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 HSD11B1P28845 292 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 HSD17B12Q53GQ0 312 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 C20orf197Q8N268 126 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 DYNLRB2Q8TF09 96 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 SLC35B3Q9H1N7 401 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 METTL1Q9UBP6 276 aaKnown RBP-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 STOML2Q9UJZ1 356 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 FAM135BQ49AJ0 1406 aa-0.66□□□□□ -2.52
SNORD28B-201ENST00000390993 A2MP01023 1474 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 ANKRD31Q8N7Z5 1873 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 LRP5O75197 1615 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 CAMSAP1Q5T5Y3 1602 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 LAMB1P07942 1786 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 CHD8Q9HCK8 2581 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 FXYD6-FXYD2A0A087WZ82 144 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 E7EQ34 232 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 YPEL1O60688 119 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 SLC25A6P12236 298 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 RPL22P35268 128 aaKnown RBP-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 CRYBA4P53673 196 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 SPCS2Q15005 226 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 DCUN1D2Q6PH85 259 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 SMIM20Q8N5G0 67 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 IFI27L1Q96BM0 104 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 NDUFAF1Q9Y375 327 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 PRKDCP78527 4128 aaKnown RBP-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 NUP210Q8TEM1 1887 aaPredicted RBP-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 BCL9LQ86UU0 1499 aa-0.67□□□□□ -2.52
SNORD28B-201ENST00000390993 KIDINS220Q9ULH0 1771 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 MYH2Q9UKX2 1941 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 LAMA5O15230 3695 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 LOC107984640A0A0U1RRK4 108 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 A0A1B0GW64 132 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 M0QZK8 103 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 ZNF609O15014 1411 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 SERPINB1P30740 379 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 C10orf71Q711Q0 1435 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 SNX29P2Q8IUI4 249 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 NPVFQ9HCQ7 196 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 CBLN4Q9NTU7 201 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 NOP16Q9Y3C1 178 aaKnown RBP-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 MED31Q9Y3C7 131 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 USF3Q68DE3 2245 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 FLGP20930 4061 aaPredicted RBP-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 MYH1P12882 1939 aa-0.68□□□□□ -2.52
SNORD28B-201ENST00000390993 ARHGAP31Q2M1Z3 1444 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 TRAV1-2A0A0B4J238 106 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 FAM92AA1XBS5 289 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 G3V318 75 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 RBP4P02753 201 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 EDDM3BP56851 147 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 KRTAP20-2Q3LI61 65 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 Q5VV11 94 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 STX12Q86Y82 276 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 ATP6V0E2Q8NHE4 81 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 SCN3BQ9NY72 215 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 CALML5Q9NZT1 146 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 GOLGA3Q08378 1498 aa-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 ZNF142P52746 1687 aaPredicted RBP-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 KIAA0100Q14667 2235 aaKnown RBP-0.69□□□□□ -2.52
SNORD28B-201ENST00000390993 MYO7BQ6PIF6 2116 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 TRAV12-3A0A0B4J271 114 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 H0YJX3 145 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 SPINK4O60575 86 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 SMIM24O75264 130 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 SLC25A5P05141 298 aaKnown RBP-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 PIGYQ3MUY2 71 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 BAGE3Q86Y29 109 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 MAGOHBQ96A72 148 aaKnown RBP-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 CHMP6Q96FZ7 201 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 TP53AIP1Q9HCN2 124 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 TRAPPC2LQ9UL33 140 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 UHRF1BP1LA0JNW5 1464 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 URB1O60287 2271 aaKnown RBP-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 AKAP11Q9UKA4 1901 aa-0.7□□□□□ -2.52
SNORD28B-201ENST00000390993 PLXNA1Q9UIW2 1896 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 ARAP1Q96P48 1450 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 J3QLW9 94 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 M0R2T5 61 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 TCRAP04437 139 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 NPC2P61916 151 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 CFAP126Q5VTH2 177 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 SPAG11AQ6PDA7 123 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 HRCT1Q6UXD1 115 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 THEM6Q8WUY1 208 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 WFDC6Q9BQY6 131 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 BOLA2Q9H3K6 86 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 ATPIF1Q9UII2 106 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 WDR97A6NE52 1622 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 MED23Q9ULK4 1368 aa-0.71□□□□□ -2.52
SNORD28B-201ENST00000390993 KIF13AQ9H1H9 1805 aa-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 TRBV6-1A0A0K0K1D8 114 aa-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 A6NIN4 97 aa-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 IFNA17P01571 189 aa-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 RBM3P98179 157 aaKnown RBP-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 TRIQKQ629K1 86 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms