RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 SPRY4Q9C004 299 aa11.49□□□□□ -0.57
LRRK1-201ENST00000388948 WISP2O76076 250 aa11.49□□□□□ -0.57
LRRK1-201ENST00000388948 ZNF726P1Q15940 193 aa11.49□□□□□ -0.57
LRRK1-201ENST00000388948 PCP4P48539 62 aa11.49□□□□□ -0.57
LRRK1-201ENST00000388948 VSIG2Q96IQ7 327 aa11.49□□□□□ -0.57
LRRK1-201ENST00000388948 PCDH15Q96QU1 1955 aa11.48□□□□□ -0.57
LRRK1-201ENST00000388948 IGLL1P15814 213 aa11.48□□□□□ -0.57
LRRK1-201ENST00000388948 C9orf153Q5TBE3 101 aa11.48□□□□□ -0.57
LRRK1-201ENST00000388948 DSCAML1Q8TD84 2053 aa11.48□□□□□ -0.57
LRRK1-201ENST00000388948 TNFRSF13BO14836 293 aaPredicted RBP11.48□□□□□ -0.57
LRRK1-201ENST00000388948 NCOR2Q9Y618 2525 aa11.48□□□□□ -0.57
LRRK1-201ENST00000388948 TNRC6AQ8NDV7 1962 aaKnown RBP11.48□□□□□ -0.57
LRRK1-201ENST00000388948 A6NDX4 124 aa11.48□□□□□ -0.57
LRRK1-201ENST00000388948 Q0VG73 95 aa11.48□□□□□ -0.57
LRRK1-201ENST00000388948 RPL39LQ96EH5 51 aaKnown RBP11.48□□□□□ -0.57
LRRK1-201ENST00000388948 IGHV4-28A0A0C4DH34 117 aa11.47□□□□□ -0.57
LRRK1-201ENST00000388948 FUSP35637 526 aaKnown RBP eCLIP11.47□□□□□ -0.57
LRRK1-201ENST00000388948 GTSF1Q8WW33 167 aa11.47□□□□□ -0.57
LRRK1-201ENST00000388948 HERV-K104P63124 156 aa11.47□□□□□ -0.57
LRRK1-201ENST00000388948 PRR20EP86478 221 aa11.47□□□□□ -0.57
LRRK1-201ENST00000388948 PRR20CP86479 221 aa11.47□□□□□ -0.57
LRRK1-201ENST00000388948 PRR20DP86480 221 aa11.47□□□□□ -0.57
LRRK1-201ENST00000388948 PRR20BP86481 221 aa11.47□□□□□ -0.57
LRRK1-201ENST00000388948 PRR20AP86496 221 aa11.47□□□□□ -0.57
LRRK1-201ENST00000388948 NAV2Q8IVL1 2488 aa11.47□□□□□ -0.57
LRRK1-201ENST00000388948 PRRC2AP48634 2157 aaKnown RBP11.47□□□□□ -0.57
LRRK1-201ENST00000388948 C14orf177Q52M58 125 aa11.47□□□□□ -0.57
LRRK1-201ENST00000388948 SPATA25Q9BR10 227 aa11.47□□□□□ -0.57
LRRK1-201ENST00000388948 IGKV2-24A0A0C4DH68 120 aa11.46□□□□□ -0.57
LRRK1-201ENST00000388948 IGKV1-17P01599 117 aa11.46□□□□□ -0.58
LRRK1-201ENST00000388948 FGF23Q9GZV9 251 aaPredicted RBP11.46□□□□□ -0.58
LRRK1-201ENST00000388948 ARHGAP21Q5T5U3 1957 aa11.46□□□□□ -0.58
LRRK1-201ENST00000388948 PLXNB1O43157 2135 aa11.46□□□□□ -0.58
LRRK1-201ENST00000388948 TRBV12-3P01733 135 aa11.46□□□□□ -0.58
LRRK1-201ENST00000388948 TMEM263Q8WUH6 116 aaKnown RBP11.46□□□□□ -0.58
LRRK1-201ENST00000388948 PRO1854Q9UHT4 67 aa11.46□□□□□ -0.58
LRRK1-201ENST00000388948 PRO0255Q9UI72 69 aa11.46□□□□□ -0.58
LRRK1-201ENST00000388948 TRBV20-1A0A075B6N2 111 aa11.45□□□□□ -0.58
LRRK1-201ENST00000388948 FAM110AQ9BQ89 295 aa11.45□□□□□ -0.58
LRRK1-201ENST00000388948 C9orf47Q6ZRZ4 202 aa11.45□□□□□ -0.58
LRRK1-201ENST00000388948 NDUFB1O75438 58 aa11.45□□□□□ -0.58
LRRK1-201ENST00000388948 BVES-AS1Q5T3Y7 98 aa11.45□□□□□ -0.58
LRRK1-201ENST00000388948 Q6YL49 198 aa11.44□□□□□ -0.58
LRRK1-201ENST00000388948 DEFB131BA0A096LNP1 70 aa11.44□□□□□ -0.58
LRRK1-201ENST00000388948 TRAV26-1A0A087WT03 109 aa11.44□□□□□ -0.58
LRRK1-201ENST00000388948 LMO4P61968 165 aa11.44□□□□□ -0.58
LRRK1-201ENST00000388948 ZFYVE26Q68DK2 2539 aa11.44□□□□□ -0.58
LRRK1-201ENST00000388948 SPAG11BQ08648 103 aa11.43□□□□□ -0.58
LRRK1-201ENST00000388948 LGALS9BQ3B8N2 356 aa11.43□□□□□ -0.58
LRRK1-201ENST00000388948 LGALS9CQ6DKI2 356 aa11.43□□□□□ -0.58
LRRK1-201ENST00000388948 GATA1P15976 413 aaPredicted RBP11.43□□□□□ -0.58
LRRK1-201ENST00000388948 K7EMI3 77 aa11.43□□□□□ -0.58
LRRK1-201ENST00000388948 DEFB1P60022 68 aa11.43□□□□□ -0.58
LRRK1-201ENST00000388948 MAP6D1Q9H9H5 199 aa11.43□□□□□ -0.58
LRRK1-201ENST00000388948 IGLV1-47P01700 117 aa11.43□□□□□ -0.58
LRRK1-201ENST00000388948 COX7B2Q8TF08 81 aa11.43□□□□□ -0.58
LRRK1-201ENST00000388948 WIPF3A6NGB9 483 aa11.43□□□□□ -0.58
LRRK1-201ENST00000388948 PLA2G2AP14555 144 aa11.43□□□□□ -0.58
LRRK1-201ENST00000388948 UNQ9165/PRO28630Q6UXU0 137 aa11.43□□□□□ -0.58
LRRK1-201ENST00000388948 UTF1Q5T230 341 aa11.42□□□□□ -0.58
LRRK1-201ENST00000388948 ORMDL1Q9P0S3 153 aa11.42□□□□□ -0.58
LRRK1-201ENST00000388948 TRACP01848 142 aa11.42□□□□□ -0.58
LRRK1-201ENST00000388948 IGF2RP11717 2491 aa11.41□□□□□ -0.58
LRRK1-201ENST00000388948 CARD19Q96LW7 228 aa11.41□□□□□ -0.58
LRRK1-201ENST00000388948 ZNF106Q9H2Y7 1883 aaKnown RBP11.41□□□□□ -0.58
LRRK1-201ENST00000388948 DKK2Q9UBU2 259 aa11.41□□□□□ -0.58
LRRK1-201ENST00000388948 SND1-IT1Q9HBX3 110 aa11.4□□□□□ -0.58
LRRK1-201ENST00000388948 NCR3O14931 201 aa11.4□□□□□ -0.58
LRRK1-201ENST00000388948 C11orf52Q96A22 123 aa11.4□□□□□ -0.58
LRRK1-201ENST00000388948 TEX22C9J3V5 150 aa11.4□□□□□ -0.59
LRRK1-201ENST00000388948 PRAC2D3DTV9 90 aa11.39□□□□□ -0.59
LRRK1-201ENST00000388948 CRYGDP07320 174 aa11.39□□□□□ -0.59
LRRK1-201ENST00000388948 KRTAP27-1Q3LI81 207 aa11.39□□□□□ -0.59
LRRK1-201ENST00000388948 B9D2Q9BPU9 175 aa11.39□□□□□ -0.59
LRRK1-201ENST00000388948 C20orf144Q9BQM9 153 aa11.39□□□□□ -0.59
LRRK1-201ENST00000388948 C9JQL5 133 aa11.39□□□□□ -0.59
LRRK1-201ENST00000388948 FAM222AQ5U5X8 452 aa11.39□□□□□ -0.59
LRRK1-201ENST00000388948 PIEZO2Q9H5I5 2752 aa11.38□□□□□ -0.59
LRRK1-201ENST00000388948 LY6G6CO95867 125 aa11.38□□□□□ -0.59
LRRK1-201ENST00000388948 WI2-2373I1.2A0A1W2PRP0 233 aa11.37□□□□□ -0.59
LRRK1-201ENST00000388948 CEND1Q8N111 149 aa11.37□□□□□ -0.59
LRRK1-201ENST00000388948 PRO3102Q9H379 93 aa11.37□□□□□ -0.59
LRRK1-201ENST00000388948 HIGD2BQ4VC39 106 aa11.37□□□□□ -0.59
LRRK1-201ENST00000388948 ZFP2Q6ZN57 461 aa11.37□□□□□ -0.59
LRRK1-201ENST00000388948 LINC00482Q8N8I6 264 aa11.37□□□□□ -0.59
LRRK1-201ENST00000388948 KIAA1549Q9HCM3 1950 aa11.37□□□□□ -0.59
LRRK1-201ENST00000388948 MSMPQ1L6U9 139 aa11.37□□□□□ -0.59
LRRK1-201ENST00000388948 K7EN84 100 aa11.37□□□□□ -0.59
LRRK1-201ENST00000388948 CHKB-CPT1BH3BT56 60 aa11.37□□□□□ -0.59
LRRK1-201ENST00000388948 CCL25O15444 150 aa11.37□□□□□ -0.59
LRRK1-201ENST00000388948 GTSF1LQ9H1H1 148 aa11.37□□□□□ -0.59
LRRK1-201ENST00000388948 MDFICQ9P1T7 246 aa11.36□□□□□ -0.59
LRRK1-201ENST00000388948 A0A0J9YX75 114 aa11.36□□□□□ -0.59
LRRK1-201ENST00000388948 ADCYAP1P18509 176 aa11.36□□□□□ -0.59
LRRK1-201ENST00000388948 ZNF124Q15973 351 aa11.36□□□□□ -0.59
LRRK1-201ENST00000388948 OPRPNQ99935 248 aaPredicted RBP11.36□□□□□ -0.59
LRRK1-201ENST00000388948 GAGE12HA6NDE8 117 aa11.36□□□□□ -0.59
LRRK1-201ENST00000388948 A0A0J9YXV3 536 aa11.36□□□□□ -0.59
LRRK1-201ENST00000388948 LTBP2Q14767 1821 aa11.36□□□□□ -0.59
LRRK1-201ENST00000388948 IGLV2-18A0A075B6J9 118 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms