RNA–Protein interactions for RNA: ENST00000382361.7

FSCN1-201, Transcript of fascin actin-bundling protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FSCN1, Length 2,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-201ENST00000382361 DEFB104AQ8WTQ1 72 aa12.63□□□□□ -0.39
FSCN1-201ENST00000382361 C9orf85Q96MD7 179 aa12.63□□□□□ -0.39
FSCN1-201ENST00000382361 ODF3Q96PU9 254 aa12.63□□□□□ -0.39
FSCN1-201ENST00000382361 SPANXB1Q9NS25 103 aaPredicted RBP12.63□□□□□ -0.39
FSCN1-201ENST00000382361 PMVKQ15126 192 aa12.63□□□□□ -0.39
FSCN1-201ENST00000382361 CD300EQ496F6 205 aaPredicted RBP12.63□□□□□ -0.39
FSCN1-201ENST00000382361 KIR2DL4Q99706 377 aa12.63□□□□□ -0.39
FSCN1-201ENST00000382361 IGHV3-16A0A0C4DH30 117 aa12.62□□□□□ -0.39
FSCN1-201ENST00000382361 SDHAF1A6NFY7 115 aa12.62□□□□□ -0.39
FSCN1-201ENST00000382361 PAPPA-AS1Q5QFB9 102 aa12.62□□□□□ -0.39
FSCN1-201ENST00000382361 SCGB1D4Q6XE38 83 aa12.62□□□□□ -0.39
FSCN1-201ENST00000382361 TMEM141Q96I45 108 aa12.62□□□□□ -0.39
FSCN1-201ENST00000382361 TIMM17AQ99595 171 aa12.62□□□□□ -0.39
FSCN1-201ENST00000382361 TRBV6-5A0A0K0K1A5 114 aa12.62□□□□□ -0.39
FSCN1-201ENST00000382361 TRBV27A0A0K0K1C4 114 aa12.62□□□□□ -0.39
FSCN1-201ENST00000382361 ZNF688P0C7X2 276 aa12.62□□□□□ -0.39
FSCN1-201ENST00000382361 EMP1P54849 157 aa12.62□□□□□ -0.39
FSCN1-201ENST00000382361 KLHL30-AS1Q8NEE0 82 aa12.62□□□□□ -0.39
FSCN1-201ENST00000382361 F5H697 171 aa12.61□□□□□ -0.39
FSCN1-201ENST00000382361 HOXA3O43365 443 aaPredicted RBP12.61□□□□□ -0.39
FSCN1-201ENST00000382361 ACACBO00763 2458 aa12.61□□□□□ -0.39
FSCN1-201ENST00000382361 CFAP161Q6P656 301 aa12.61□□□□□ -0.39
FSCN1-201ENST00000382361 C10orf99Q6UWK7 81 aa12.61□□□□□ -0.39
FSCN1-201ENST00000382361 PRO0461Q9UI25 63 aa12.61□□□□□ -0.39
FSCN1-201ENST00000382361 A0A0J9YX75 114 aa12.6□□□□□ -0.39
FSCN1-201ENST00000382361 B4DSR2 109 aa12.6□□□□□ -0.39
FSCN1-201ENST00000382361 UBE2D1P51668 147 aa12.6□□□□□ -0.39
FSCN1-201ENST00000382361 A6NJY4 79 aa12.6□□□□□ -0.39
FSCN1-201ENST00000382361 HERVK_113P61574 105 aa12.6□□□□□ -0.39
FSCN1-201ENST00000382361 FAM74A4Q5TZK3 123 aa12.6□□□□□ -0.39
FSCN1-201ENST00000382361 PGPEP1Q9NXJ5 209 aa12.6□□□□□ -0.39
FSCN1-201ENST00000382361 MDFICQ9P1T7 246 aa12.6□□□□□ -0.39
FSCN1-201ENST00000382361 TRAV12-2A0A075B6T6 113 aa12.59□□□□□ -0.39
FSCN1-201ENST00000382361 IGHV4-59P01825 116 aa12.59□□□□□ -0.39
FSCN1-201ENST00000382361 ZNF876PQ49A33 203 aa12.58□□□□□ -0.39
FSCN1-201ENST00000382361 GAGE13Q4V321 117 aa12.58□□□□□ -0.39
FSCN1-201ENST00000382361 CRYBG3Q68DQ2 2970 aa12.58□□□□□ -0.39
FSCN1-201ENST00000382361 Q8N1Y9 231 aa12.58□□□□□ -0.39
FSCN1-201ENST00000382361 A0A0J9YY99 117 aa12.58□□□□□ -0.4
FSCN1-201ENST00000382361 IGKV3-20P01619 116 aa12.58□□□□□ -0.4
FSCN1-201ENST00000382361 SNRPD3P62318 126 aaKnown RBP12.58□□□□□ -0.4
FSCN1-201ENST00000382361 ZNRF2Q8NHG8 242 aa12.58□□□□□ -0.4
FSCN1-201ENST00000382361 K7EQG2 157 aa12.58□□□□□ -0.4
FSCN1-201ENST00000382361 M0QY20 66 aa12.58□□□□□ -0.4
FSCN1-201ENST00000382361 TSPEAR-AS2P59090 65 aa12.58□□□□□ -0.4
FSCN1-201ENST00000382361 SRSF9Q13242 221 aaKnown RBP eCLIP12.58□□□□□ -0.4
FSCN1-201ENST00000382361 MTURNQ8N3F0 131 aa12.58□□□□□ -0.4
FSCN1-201ENST00000382361 MRPL16Q9NX20 251 aaKnown RBP12.58□□□□□ -0.4
FSCN1-201ENST00000382361 DEFB112Q30KQ8 113 aa12.57□□□□□ -0.4
FSCN1-201ENST00000382361 SH2D6Q7Z4S9 175 aa12.57□□□□□ -0.4
FSCN1-201ENST00000382361 SYT8Q8NBV8 401 aa12.57□□□□□ -0.4
FSCN1-201ENST00000382361 MAP1AP78559 2803 aaPredicted RBP12.57□□□□□ -0.4
FSCN1-201ENST00000382361 ZNF56Q15929 161 aa12.57□□□□□ -0.4
FSCN1-201ENST00000382361 ETDBQ3ZM63 59 aa12.57□□□□□ -0.4
FSCN1-201ENST00000382361 GATA3P23771 443 aa12.56□□□□□ -0.4
FSCN1-201ENST00000382361 NSUN5P1Q3KNT7 163 aa12.56□□□□□ -0.4
FSCN1-201ENST00000382361 ZNF256Q9Y2P7 627 aaPredicted RBP12.56□□□□□ -0.4
FSCN1-201ENST00000382361 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.56□□□□□ -0.45e-9■■□□□ 13.9
FSCN1-201ENST00000382361 IGHV1OR15-1A0A075B7D0 117 aa12.56□□□□□ -0.4
FSCN1-201ENST00000382361 TMEM89A2RUT3 159 aa12.56□□□□□ -0.4
FSCN1-201ENST00000382361 CIDEAO60543 219 aa12.56□□□□□ -0.4
FSCN1-201ENST00000382361 TSPAN13O95857 204 aa12.55□□□□□ -0.4
FSCN1-201ENST00000382361 SPINK13Q1W4C9 94 aa12.55□□□□□ -0.4
FSCN1-201ENST00000382361 RHOHQ15669 191 aa12.55□□□□□ -0.4
FSCN1-201ENST00000382361 TMEM170BQ5T4T1 132 aa12.55□□□□□ -0.4
FSCN1-201ENST00000382361 AMELXQ99217 191 aa12.55□□□□□ -0.4
FSCN1-201ENST00000382361 CFAP46Q8IYW2 2715 aa12.54□□□□□ -0.4
FSCN1-201ENST00000382361 TMEM238C9JI98 176 aa12.54□□□□□ -0.4
FSCN1-201ENST00000382361 TRPT1Q86TN4 253 aaKnown RBP12.54□□□□□ -0.4
FSCN1-201ENST00000382361 NFE4Q86UQ8 179 aa12.53□□□□□ -0.4
FSCN1-201ENST00000382361 SPAG8Q99932 426 aaPredicted RBP12.53□□□□□ -0.4
FSCN1-201ENST00000382361 CSMD2Q7Z408 3487 aa12.53□□□□□ -0.4
FSCN1-201ENST00000382361 J3QR89 54 aa12.53□□□□□ -0.4
FSCN1-201ENST00000382361 SYNJ2BPP57105 145 aa12.53□□□□□ -0.4
FSCN1-201ENST00000382361 TSSC4Q9Y5U2 329 aaPredicted RBP12.53□□□□□ -0.4
FSCN1-201ENST00000382361 IGHV3-30P01768 117 aa12.52□□□□□ -0.4
FSCN1-201ENST00000382361 IGHV3-30-5P0DP03 117 aa12.52□□□□□ -0.4
FSCN1-201ENST00000382361 DLX4Q92988 240 aaPredicted RBP12.52□□□□□ -0.4
FSCN1-201ENST00000382361 P0DMU3 169 aa12.52□□□□□ -0.41
FSCN1-201ENST00000382361 FAM231AP0DMU4 169 aa12.52□□□□□ -0.41
FSCN1-201ENST00000382361 FAM231CP0DMU5 169 aa12.52□□□□□ -0.41
FSCN1-201ENST00000382361 UBE2D3P61077 147 aa12.52□□□□□ -0.41
FSCN1-201ENST00000382361 UBE2D2P62837 147 aa12.52□□□□□ -0.41
FSCN1-201ENST00000382361 NDUFA11Q86Y39 141 aa12.52□□□□□ -0.41
FSCN1-201ENST00000382361 SLC25A29Q8N8R3 303 aa12.52□□□□□ -0.41
FSCN1-201ENST00000382361 SPG11Q96JI7 2443 aa12.52□□□□□ -0.41
FSCN1-201ENST00000382361 CFAP126Q5VTH2 177 aa12.52□□□□□ -0.41
FSCN1-201ENST00000382361 RNF152Q8N8N0 203 aa12.52□□□□□ -0.41
FSCN1-201ENST00000382361 OPRPNQ99935 248 aaPredicted RBP12.52□□□□□ -0.41
FSCN1-201ENST00000382361 J3QQQ9 107 aa12.51□□□□□ -0.41
FSCN1-201ENST00000382361 APOMO95445 188 aa12.51□□□□□ -0.41
FSCN1-201ENST00000382361 NRGNQ92686 78 aa12.51□□□□□ -0.41
FSCN1-201ENST00000382361 DSCR9P59020 149 aa12.51□□□□□ -0.41
FSCN1-201ENST00000382361 GAGE12HA6NDE8 117 aa12.5□□□□□ -0.41
FSCN1-201ENST00000382361 C20orf203Q8NBC4 194 aa12.5□□□□□ -0.41
FSCN1-201ENST00000382361 IGSF10Q6WRI0 2623 aa12.5□□□□□ -0.41
FSCN1-201ENST00000382361 CSPG4Q6UVK1 2322 aa12.5□□□□□ -0.41
FSCN1-201ENST00000382361 DOPEY1Q5JWR5 2465 aa12.5□□□□□ -0.41
FSCN1-201ENST00000382361 LINC01356Q8N9X3 169 aa12.5□□□□□ -0.41
FSCN1-201ENST00000382361 SPATA25Q9BR10 227 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms