RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 TEX46H3BTG2 121 aa16.63■□□□□ 0.25
TNFRSF4-201ENST00000379236 BAGE2Q86Y30 109 aa16.63■□□□□ 0.25
TNFRSF4-201ENST00000379236 Q9HAA7 133 aa16.63■□□□□ 0.25
TNFRSF4-201ENST00000379236 MANBALQ9NQG1 85 aa16.63■□□□□ 0.25
TNFRSF4-201ENST00000379236 A0A087WWL8 130 aa16.62■□□□□ 0.25
TNFRSF4-201ENST00000379236 UFSP1Q6NVU6 142 aa16.62■□□□□ 0.25
TNFRSF4-201ENST00000379236 C14orf178Q8N769 122 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF4-201ENST00000379236 SFRP2Q96HF1 295 aa16.62■□□□□ 0.25
TNFRSF4-201ENST00000379236 IBA57-AS1B1ANH7 110 aa16.61■□□□□ 0.25
TNFRSF4-201ENST00000379236 RAB5CP51148 216 aa16.61■□□□□ 0.25
TNFRSF4-201ENST00000379236 PRR27Q6MZM9 219 aa16.61■□□□□ 0.25
TNFRSF4-201ENST00000379236 SCRT2Q9NQ03 307 aa16.61■□□□□ 0.25
TNFRSF4-201ENST00000379236 GNG13Q9P2W3 67 aa16.61■□□□□ 0.25
TNFRSF4-201ENST00000379236 A0A087WWC5 75 aa16.6■□□□□ 0.25
TNFRSF4-201ENST00000379236 FUSP35637 526 aaKnown RBP eCLIP16.6■□□□□ 0.25
TNFRSF4-201ENST00000379236 APOBP04114 4563 aaKnown RBP16.6■□□□□ 0.25
TNFRSF4-201ENST00000379236 LINC00694P0DN24 101 aa16.58■□□□□ 0.24
TNFRSF4-201ENST00000379236 RPL19P84098 196 aaKnown RBP16.58■□□□□ 0.24
TNFRSF4-201ENST00000379236 ABCA13Q86UQ4 5058 aa16.57■□□□□ 0.24
TNFRSF4-201ENST00000379236 URGCP-MRPS24S4R325 110 aa16.57■□□□□ 0.24
TNFRSF4-201ENST00000379236 CXCL1P09341 107 aa16.56■□□□□ 0.24
TNFRSF4-201ENST00000379236 RPL35P42766 123 aaKnown RBP16.56■□□□□ 0.24
TNFRSF4-201ENST00000379236 LAGE3Q14657 143 aa16.56■□□□□ 0.24
TNFRSF4-201ENST00000379236 MLST8Q9BVC4 326 aa16.56■□□□□ 0.24
TNFRSF4-201ENST00000379236 RPL36AP83881 106 aaKnown RBP16.55■□□□□ 0.24
TNFRSF4-201ENST00000379236 TOR2AQ5JU69 321 aa16.55■□□□□ 0.24
TNFRSF4-201ENST00000379236 SPANXN1Q5VSR9 72 aa16.55■□□□□ 0.24
TNFRSF4-201ENST00000379236 TCTE3Q8IZS6 198 aa16.55■□□□□ 0.24
TNFRSF4-201ENST00000379236 RPL36ALQ969Q0 106 aaKnown RBP16.55■□□□□ 0.24
TNFRSF4-201ENST00000379236 TM2D2Q9BX73 214 aa16.55■□□□□ 0.24
TNFRSF4-201ENST00000379236 Q9UF83 564 aa16.55■□□□□ 0.24
TNFRSF4-201ENST00000379236 TRAV1-1A0A0B4J248 108 aa16.54■□□□□ 0.24
TNFRSF4-201ENST00000379236 TRBV10-1A0A0K0K1A3 114 aa16.54■□□□□ 0.24
TNFRSF4-201ENST00000379236 IFNA1P01562 189 aa16.54■□□□□ 0.24
TNFRSF4-201ENST00000379236 CCL20P78556 96 aa16.54■□□□□ 0.24
TNFRSF4-201ENST00000379236 ZNF56Q15929 161 aa16.54■□□□□ 0.24
TNFRSF4-201ENST00000379236 Q8N1X5 172 aa16.54■□□□□ 0.24
TNFRSF4-201ENST00000379236 SULT1A2P50226 295 aa16.53■□□□□ 0.24
TNFRSF4-201ENST00000379236 OR10AG1Q8NH19 301 aa16.53■□□□□ 0.24
TNFRSF4-201ENST00000379236 KRTAP4-5Q9BYR2 181 aa16.53■□□□□ 0.24
TNFRSF4-201ENST00000379236 KCNIP4Q6PIL6 250 aa16.52■□□□□ 0.24
TNFRSF4-201ENST00000379236 C11orf52Q96A22 123 aa16.52■□□□□ 0.24
TNFRSF4-201ENST00000379236 DAZAP1Q96EP5 407 aaKnown RBP16.52■□□□□ 0.24
TNFRSF4-201ENST00000379236 IGLV5-52A0A0A0MRZ9 124 aa16.51■□□□□ 0.23
TNFRSF4-201ENST00000379236 TRAV8-3A0A0A6YYJ7 113 aa16.51■□□□□ 0.23
TNFRSF4-201ENST00000379236 RAB4BP61018 213 aa16.51■□□□□ 0.23
TNFRSF4-201ENST00000379236 CENPWQ5EE01 88 aa16.51■□□□□ 0.23
TNFRSF4-201ENST00000379236 DERL1Q9BUN8 251 aa16.51■□□□□ 0.23
TNFRSF4-201ENST00000379236 SNAI2O43623 268 aa16.5■□□□□ 0.23
TNFRSF4-201ENST00000379236 SMIM17P0DL12 118 aa16.5■□□□□ 0.23
TNFRSF4-201ENST00000379236 GCSHP23434 173 aa16.5■□□□□ 0.23
TNFRSF4-201ENST00000379236 SSTP61278 116 aa16.5■□□□□ 0.23
TNFRSF4-201ENST00000379236 SLC51BQ86UW2 128 aa16.5■□□□□ 0.23
TNFRSF4-201ENST00000379236 Q8N3U1 123 aa16.5■□□□□ 0.23
TNFRSF4-201ENST00000379236 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.5■□□□□ 0.23
TNFRSF4-201ENST00000379236 TRBV7-3A0A075B6L6 115 aa16.49■□□□□ 0.23
TNFRSF4-201ENST00000379236 MUC21A0A0G2JKD1 596 aa16.49■□□□□ 0.23
TNFRSF4-201ENST00000379236 MUC21A0A140T8X8 626 aa16.49■□□□□ 0.23
TNFRSF4-201ENST00000379236 C1QBP02746 253 aa16.49■□□□□ 0.23
TNFRSF4-201ENST00000379236 OR5AL1P0C617 328 aa16.49■□□□□ 0.23
TNFRSF4-201ENST00000379236 MEF2BQ02080 365 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF4-201ENST00000379236 DAZ4Q86SG3 579 aaKnown RBP16.49■□□□□ 0.23
TNFRSF4-201ENST00000379236 NTN5Q8WTR8 489 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF4-201ENST00000379236 DAZ3Q9NR90 486 aaKnown RBP16.49■□□□□ 0.23
TNFRSF4-201ENST00000379236 LRCOL1A6NCL2 159 aa16.48■□□□□ 0.23
TNFRSF4-201ENST00000379236 F5H697 171 aa16.48■□□□□ 0.23
TNFRSF4-201ENST00000379236 PDE6DO43924 150 aa16.48■□□□□ 0.23
TNFRSF4-201ENST00000379236 GNG4P50150 75 aa16.48■□□□□ 0.23
TNFRSF4-201ENST00000379236 A0A087WX48 190 aa16.47■□□□□ 0.23
TNFRSF4-201ENST00000379236 Q8N814 137 aa16.47■□□□□ 0.23
TNFRSF4-201ENST00000379236 RMI2Q96E14 147 aa16.47■□□□□ 0.23
TNFRSF4-201ENST00000379236 TPPP3Q9BW30 176 aa16.47■□□□□ 0.23
TNFRSF4-201ENST00000379236 SSBP4Q9BWG4 385 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF4-201ENST00000379236 KRTAP10-1P60331 282 aa16.46■□□□□ 0.23
TNFRSF4-201ENST00000379236 RPS20P60866 119 aaKnown RBP16.46■□□□□ 0.23
TNFRSF4-201ENST00000379236 UBE2D3P61077 147 aa16.46■□□□□ 0.23
TNFRSF4-201ENST00000379236 UBE2D2P62837 147 aa16.46■□□□□ 0.23
TNFRSF4-201ENST00000379236 NIT1Q86X76 327 aa16.46■□□□□ 0.23
TNFRSF4-201ENST00000379236 AP1S3Q96PC3 154 aa16.46■□□□□ 0.23
TNFRSF4-201ENST00000379236 MED9Q9NWA0 146 aa16.46■□□□□ 0.23
TNFRSF4-201ENST00000379236 AKAP14Q86UN6 197 aa16.45■□□□□ 0.22
TNFRSF4-201ENST00000379236 SMIM12Q96EX1 92 aa16.45■□□□□ 0.22
TNFRSF4-201ENST00000379236 COX11Q9Y6N1 276 aa16.45■□□□□ 0.22
TNFRSF4-201ENST00000379236 RAB19A4D1S5 217 aa16.44■□□□□ 0.22
TNFRSF4-201ENST00000379236 BCL2P10415 239 aa16.44■□□□□ 0.22
TNFRSF4-201ENST00000379236 ELOBQ15370 118 aa16.44■□□□□ 0.22
TNFRSF4-201ENST00000379236 OR2D3Q8NGH3 330 aa16.44■□□□□ 0.22
TNFRSF4-201ENST00000379236 OR10G8Q8NGN5 311 aa16.44■□□□□ 0.22
TNFRSF4-201ENST00000379236 BIN3Q9NQY0 253 aa16.44■□□□□ 0.22
TNFRSF4-201ENST00000379236 XKRY2A2RUG3 117 aa16.43■□□□□ 0.22
TNFRSF4-201ENST00000379236 FER1L6-AS1Q8NA97 138 aa16.43■□□□□ 0.22
TNFRSF4-201ENST00000379236 NEXN-AS1Q8NBZ9 246 aa16.43■□□□□ 0.22
TNFRSF4-201ENST00000379236 CHCHD7Q9BUK0 85 aa16.43■□□□□ 0.22
TNFRSF4-201ENST00000379236 VAX2Q9UIW0 290 aa16.43■□□□□ 0.22
TNFRSF4-201ENST00000379236 TMEM262E9PQX1 116 aa16.42■□□□□ 0.22
TNFRSF4-201ENST00000379236 P01737 135 aa16.42■□□□□ 0.22
TNFRSF4-201ENST00000379236 TAGLN2P37802 199 aaKnown RBP16.42■□□□□ 0.22
TNFRSF4-201ENST00000379236 Q6ZNX1 250 aa16.42■□□□□ 0.22
TNFRSF4-201ENST00000379236 KLK12Q9UKR0 248 aa16.42■□□□□ 0.22
TNFRSF4-201ENST00000379236 hCG_2014768A0A024R1R8 64 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms