RNA–Protein interactions for RNA: ENST00000378746.8

KIF3A-202, Transcript of kinesin family member 3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene KIF3A, Length 6,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-202ENST00000378746 ATP5G1P05496 136 aa12□□□□□ -0.49
KIF3A-202ENST00000378746 LINC00322Q6ZN03 302 aaPredicted RBP12□□□□□ -0.49
KIF3A-202ENST00000378746 SLURP1P55000 103 aa12□□□□□ -0.49
KIF3A-202ENST00000378746 DEFB121Q5J5C9 76 aa11.99□□□□□ -0.49
KIF3A-202ENST00000378746 C5orf38Q86SI9 138 aa11.99□□□□□ -0.49
KIF3A-202ENST00000378746 OPRPNQ99935 248 aaPredicted RBP11.99□□□□□ -0.49
KIF3A-202ENST00000378746 SHANK1Q9Y566 2161 aa11.99□□□□□ -0.49
KIF3A-202ENST00000378746 CLPSL2Q6UWE3 100 aa11.99□□□□□ -0.49
KIF3A-202ENST00000378746 FAM236AA0A1B0GUQ0 79 aa11.99□□□□□ -0.49
KIF3A-202ENST00000378746 FAM236BA0A1B0GV22 79 aa11.99□□□□□ -0.49
KIF3A-202ENST00000378746 CXCL5P42830 114 aa11.99□□□□□ -0.49
KIF3A-202ENST00000378746 C10orf105Q8TEF2 133 aa11.99□□□□□ -0.49
KIF3A-202ENST00000378746 TM2D2Q9BX73 214 aa11.99□□□□□ -0.49
KIF3A-202ENST00000378746 RBM3P98179 157 aaKnown RBP11.99□□□□□ -0.49
KIF3A-202ENST00000378746 LOXL1Q08397 574 aaPredicted RBP11.99□□□□□ -0.49
KIF3A-202ENST00000378746 ODF3Q96PU9 254 aa11.99□□□□□ -0.49
KIF3A-202ENST00000378746 COX7A2LO14548 114 aa11.98□□□□□ -0.49
KIF3A-202ENST00000378746 APRG1Q8IVJ8 170 aa11.98□□□□□ -0.49
KIF3A-202ENST00000378746 SMIM20Q8N5G0 67 aa11.98□□□□□ -0.49
KIF3A-202ENST00000378746 BLCAPP62952 87 aa11.98□□□□□ -0.49
KIF3A-202ENST00000378746 FBXL19-AS1Q494R0 122 aa11.98□□□□□ -0.49
KIF3A-202ENST00000378746 A0A096LPF7 62 aa11.98□□□□□ -0.49
KIF3A-202ENST00000378746 J3KT08 172 aa11.97□□□□□ -0.49
KIF3A-202ENST00000378746 FSTL3O95633 263 aa11.97□□□□□ -0.49
KIF3A-202ENST00000378746 DAZAP2Q15038 168 aaPredicted RBP11.97□□□□□ -0.49
KIF3A-202ENST00000378746 U3KQK5 164 aa11.97□□□□□ -0.49
KIF3A-202ENST00000378746 KIF26AQ9ULI4 1882 aaPredicted RBP11.97□□□□□ -0.49
KIF3A-202ENST00000378746 ODF3BA8MYP8 253 aa11.97□□□□□ -0.49
KIF3A-202ENST00000378746 LTBP2Q14767 1821 aa11.97□□□□□ -0.49
KIF3A-202ENST00000378746 TMEM131Q92545 1883 aa11.97□□□□□ -0.49
KIF3A-202ENST00000378746 MIAQ16674 131 aa11.97□□□□□ -0.49
KIF3A-202ENST00000378746 TP53TG3Q9ULZ0 132 aa11.97□□□□□ -0.49
KIF3A-202ENST00000378746 A0A1B0GX51 115 aa11.96□□□□□ -0.49
KIF3A-202ENST00000378746 ZNF80P51504 273 aaPredicted RBP11.96□□□□□ -0.49
KIF3A-202ENST00000378746 C3orf56Q8N813 242 aa11.96□□□□□ -0.49
KIF3A-202ENST00000378746 IGHV4OR15-8A0A075B7B6 117 aa11.96□□□□□ -0.49
KIF3A-202ENST00000378746 A0A087WW49 117 aa11.96□□□□□ -0.49
KIF3A-202ENST00000378746 A0A0J9YX75 114 aa11.96□□□□□ -0.5
KIF3A-202ENST00000378746 FUSP35637 526 aaKnown RBP eCLIP11.96□□□□□ -0.5
KIF3A-202ENST00000378746 HIST2H2BCQ6DN03 193 aa11.96□□□□□ -0.5
KIF3A-202ENST00000378746 DIDO1Q9BTC0 2240 aaKnown RBP11.96□□□□□ -0.5
KIF3A-202ENST00000378746 DEFB136Q30KP8 78 aa11.96□□□□□ -0.5
KIF3A-202ENST00000378746 PKIGQ9Y2B9 76 aa11.96□□□□□ -0.5
KIF3A-202ENST00000378746 GYPEP15421 78 aa11.95□□□□□ -0.5
KIF3A-202ENST00000378746 ZFP36P26651 326 aaKnown RBP11.95□□□□□ -0.5
KIF3A-202ENST00000378746 MRPL23Q16540 153 aaKnown RBP11.95□□□□□ -0.5
KIF3A-202ENST00000378746 Q6ZQT7 251 aa11.95□□□□□ -0.5
KIF3A-202ENST00000378746 IGHV3-30-3P0DP02 117 aa11.95□□□□□ -0.5
KIF3A-202ENST00000378746 INTS1Q8N201 2190 aaKnown RBP11.95□□□□□ -0.5
KIF3A-202ENST00000378746 TCL1BO95988 128 aa11.95□□□□□ -0.5
KIF3A-202ENST00000378746 NEXN-AS1Q8NBZ9 246 aa11.95□□□□□ -0.5
KIF3A-202ENST00000378746 A0A1W2PNU3 283 aaPredicted RBP11.94□□□□□ -0.5
KIF3A-202ENST00000378746 RS1O15537 224 aa11.94□□□□□ -0.5
KIF3A-202ENST00000378746 MRAPQ8TCY5 172 aa11.94□□□□□ -0.5
KIF3A-202ENST00000378746 IGHV4-30-2A0A087WSY4 118 aa11.94□□□□□ -0.5
KIF3A-202ENST00000378746 ADORA2A-AS1P86434 159 aa11.94□□□□□ -0.5
KIF3A-202ENST00000378746 SPANXB1Q9NS25 103 aaPredicted RBP11.94□□□□□ -0.5
KIF3A-202ENST00000378746 CRYGBP07316 175 aa11.94□□□□□ -0.5
KIF3A-202ENST00000378746 PSMB8P28062 276 aa11.94□□□□□ -0.5
KIF3A-202ENST00000378746 TRBV10-1A0A0K0K1A3 114 aa11.94□□□□□ -0.5
KIF3A-202ENST00000378746 MYCNOSP40205 109 aa11.94□□□□□ -0.5
KIF3A-202ENST00000378746 CLEC2BQ92478 149 aa11.94□□□□□ -0.5
KIF3A-202ENST00000378746 hADV29S1A0JD25 119 aa11.94□□□□□ -0.5
KIF3A-202ENST00000378746 LINC00643Q86TS7 51 aa11.94□□□□□ -0.5
KIF3A-202ENST00000378746 A0A0J9YY99 117 aa11.93□□□□□ -0.5
KIF3A-202ENST00000378746 C9orf66Q5T8R8 295 aa11.93□□□□□ -0.5
KIF3A-202ENST00000378746 NFE4Q86UQ8 179 aa11.93□□□□□ -0.5
KIF3A-202ENST00000378746 CCDC140Q96MF4 163 aa11.93□□□□□ -0.5
KIF3A-202ENST00000378746 TMEM61Q8N0U2 210 aa11.92□□□□□ -0.5
KIF3A-202ENST00000378746 ALPK3Q96L96 1907 aa11.92□□□□□ -0.5
KIF3A-202ENST00000378746 IGKV3D-7A0A0C4DH55 119 aa11.92□□□□□ -0.5
KIF3A-202ENST00000378746 A6NDX4 124 aa11.92□□□□□ -0.5
KIF3A-202ENST00000378746 AKAP6Q13023 2319 aa11.92□□□□□ -0.5
KIF3A-202ENST00000378746 C4orf3Q8WVX3 66 aa11.92□□□□□ -0.5
KIF3A-202ENST00000378746 DAND5Q8N907 189 aa11.92□□□□□ -0.5
KIF3A-202ENST00000378746 Q6ZUT4 128 aa11.92□□□□□ -0.5
KIF3A-202ENST00000378746 PKDREJQ9NTG1 2253 aa11.92□□□□□ -0.5
KIF3A-202ENST00000378746 A0A0J9YXY3 114 aa11.91□□□□□ -0.5
KIF3A-202ENST00000378746 PDE6GP18545 87 aa11.91□□□□□ -0.5
KIF3A-202ENST00000378746 C1orf229Q6ZS94 237 aaPredicted RBP11.91□□□□□ -0.5
KIF3A-202ENST00000378746 CAMK2N2Q96S95 79 aa11.91□□□□□ -0.5
KIF3A-202ENST00000378746 C1orf43Q9BWL3 253 aa11.91□□□□□ -0.5
KIF3A-202ENST00000378746 IGKV2D-24A0A075B6R9 120 aa11.91□□□□□ -0.5
KIF3A-202ENST00000378746 LECT2O14960 151 aa11.91□□□□□ -0.5
KIF3A-202ENST00000378746 DEFB113Q30KQ7 82 aa11.9□□□□□ -0.5
KIF3A-202ENST00000378746 UNQ9165/PRO28630Q6UXU0 137 aa11.9□□□□□ -0.5
KIF3A-202ENST00000378746 MALRD1Q5VYJ5 2156 aa11.9□□□□□ -0.5
KIF3A-202ENST00000378746 TMEM256-PLSCR3K7ERE1 68 aa11.9□□□□□ -0.5
KIF3A-202ENST00000378746 ROS1P08922 2347 aa11.9□□□□□ -0.5
KIF3A-202ENST00000378746 CNOT1A5YKK6 2376 aaKnown RBP11.9□□□□□ -0.51
KIF3A-202ENST00000378746 ETDCA0A1B0GVM5 59 aa11.89□□□□□ -0.51
KIF3A-202ENST00000378746 SPART-AS1P0CW21 52 aa11.89□□□□□ -0.51
KIF3A-202ENST00000378746 PTH2Q96A98 100 aa11.89□□□□□ -0.51
KIF3A-202ENST00000378746 PLA2G5P39877 138 aa11.89□□□□□ -0.51
KIF3A-202ENST00000378746 GVINP1Q7Z2Y8 2422 aa11.89□□□□□ -0.51
KIF3A-202ENST00000378746 DOCK7Q96N67 2140 aa11.88□□□□□ -0.51
KIF3A-202ENST00000378746 EP300Q09472 2414 aaPredicted RBP11.88□□□□□ -0.51
KIF3A-202ENST00000378746 MIR7-3HGQ8N6C7 128 aa11.88□□□□□ -0.51
KIF3A-202ENST00000378746 TMEM263Q8WUH6 116 aaKnown RBP11.88□□□□□ -0.51
KIF3A-202ENST00000378746 TRAV26-1A0A087WT03 109 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms