RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 SYT8Q8NBV8 401 aa13.21□□□□□ -0.3
CTSA-204ENST00000372484 A8MTW9 85 aa13.2□□□□□ -0.3
CTSA-204ENST00000372484 HILS1P60008 231 aa13.2□□□□□ -0.3
CTSA-204ENST00000372484 SPAG8Q99932 426 aaPredicted RBP13.2□□□□□ -0.3
CTSA-204ENST00000372484 MRPS16Q9Y3D3 137 aaKnown RBP13.2□□□□□ -0.3
CTSA-204ENST00000372484 NUDT3O95989 172 aa13.19□□□□□ -0.3
CTSA-204ENST00000372484 PRSS1P07477 247 aa13.19□□□□□ -0.3
CTSA-204ENST00000372484 TMEM160Q9NX00 188 aa13.19□□□□□ -0.3
CTSA-204ENST00000372484 NOTCH2Q04721 2471 aa13.19□□□□□ -0.3
CTSA-204ENST00000372484 CBY3A6NI87 242 aa13.19□□□□□ -0.3
CTSA-204ENST00000372484 RBMY1A1P0DJD3 496 aaKnown RBP13.19□□□□□ -0.3
CTSA-204ENST00000372484 RBMY1CP0DJD4 496 aa13.19□□□□□ -0.3
CTSA-204ENST00000372484 RBMY1FQ15415 496 aaKnown RBP13.19□□□□□ -0.3
CTSA-204ENST00000372484 SLC25A34Q6PIV7 304 aa13.19□□□□□ -0.3
CTSA-204ENST00000372484 TP73-AS1Q9UF72 201 aa13.19□□□□□ -0.3
CTSA-204ENST00000372484 ZNF256Q9Y2P7 627 aaPredicted RBP13.19□□□□□ -0.3
CTSA-204ENST00000372484 TRGV11A0A075B6L2 103 aa13.18□□□□□ -0.3
CTSA-204ENST00000372484 RBMY1BA6NDE4 496 aaKnown RBP13.18□□□□□ -0.3
CTSA-204ENST00000372484 RBMY1EA6NEQ0 496 aaKnown RBP13.18□□□□□ -0.3
CTSA-204ENST00000372484 F5H697 171 aa13.18□□□□□ -0.3
CTSA-204ENST00000372484 ATP5LO75964 103 aa13.18□□□□□ -0.3
CTSA-204ENST00000372484 RBMY1DP0C7P1 496 aaKnown RBP13.18□□□□□ -0.3
CTSA-204ENST00000372484 DKK2Q9UBU2 259 aa13.18□□□□□ -0.3
CTSA-204ENST00000372484 HTN1P15515 57 aa13.18□□□□□ -0.3
CTSA-204ENST00000372484 ORMDL2Q53FV1 153 aa13.18□□□□□ -0.3
CTSA-204ENST00000372484 FAM74A4Q5TZK3 123 aa13.18□□□□□ -0.3
CTSA-204ENST00000372484 ANK3Q12955 4377 aaKnown RBP13.17□□□□□ -0.3
CTSA-204ENST00000372484 NUTF2P61970 127 aaKnown RBP13.17□□□□□ -0.3
CTSA-204ENST00000372484 SUMO4Q6EEV6 95 aa13.17□□□□□ -0.3
CTSA-204ENST00000372484 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
CTSA-204ENST00000372484 K7EMI3 77 aa13.16□□□□□ -0.3
CTSA-204ENST00000372484 ODF1Q14990 250 aa13.16□□□□□ -0.3
CTSA-204ENST00000372484 STPG4Q8N801 248 aa13.16□□□□□ -0.3
CTSA-204ENST00000372484 CSTL1Q9H114 145 aa13.16□□□□□ -0.3
CTSA-204ENST00000372484 ZNF876PQ49A33 203 aa13.15□□□□□ -0.3
CTSA-204ENST00000372484 ANKRD39Q53RE8 183 aa13.15□□□□□ -0.3
CTSA-204ENST00000372484 SETXQ7Z333 2677 aaKnown RBP13.14□□□□□ -0.31
CTSA-204ENST00000372484 COX8AP10176 69 aa13.14□□□□□ -0.31
CTSA-204ENST00000372484 NIPBLQ6KC79 2804 aaeCLIP13.14□□□□□ -0.31
CTSA-204ENST00000372484 HINT1P49773 126 aaPredicted RBP13.13□□□□□ -0.31
CTSA-204ENST00000372484 ZNF56Q15929 161 aa13.13□□□□□ -0.31
CTSA-204ENST00000372484 ODF3L2Q3SX64 289 aa13.13□□□□□ -0.31
CTSA-204ENST00000372484 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.13□□□□□ -0.31
CTSA-204ENST00000372484 LY6G6DO95868 133 aa13.13□□□□□ -0.31
CTSA-204ENST00000372484 CRYGDP07320 174 aa13.13□□□□□ -0.31
CTSA-204ENST00000372484 COL5A1-AS1Q5SY13 56 aa13.13□□□□□ -0.31
CTSA-204ENST00000372484 OTOGQ6ZRI0 2925 aa13.12□□□□□ -0.31
CTSA-204ENST00000372484 TCTAP57738 103 aa13.12□□□□□ -0.31
CTSA-204ENST00000372484 NEGR1Q7Z3B1 354 aa13.12□□□□□ -0.31
CTSA-204ENST00000372484 TOMM6Q96B49 74 aa13.12□□□□□ -0.31
CTSA-204ENST00000372484 ZMAT4Q9H898 229 aa13.12□□□□□ -0.31
CTSA-204ENST00000372484 NDUFA7O95182 113 aa13.12□□□□□ -0.31
CTSA-204ENST00000372484 RPL32P62910 135 aaKnown RBP13.12□□□□□ -0.31
CTSA-204ENST00000372484 SCGB3A1Q96QR1 104 aa13.12□□□□□ -0.31
CTSA-204ENST00000372484 JMJD8Q96S16 334 aa13.12□□□□□ -0.31
CTSA-204ENST00000372484 IGKCP01834 107 aa13.1□□□□□ -0.31
CTSA-204ENST00000372484 PRM2P04554 102 aa13.1□□□□□ -0.31
CTSA-204ENST00000372484 POLR2KP53803 58 aaKnown RBP13.1□□□□□ -0.31
CTSA-204ENST00000372484 C2orf66Q6UXQ4 117 aa13.1□□□□□ -0.31
CTSA-204ENST00000372484 OR11H12B2RN74 326 aa13.1□□□□□ -0.31
CTSA-204ENST00000372484 SAP30O75446 220 aa13.1□□□□□ -0.31
CTSA-204ENST00000372484 INSP01308 110 aa13.1□□□□□ -0.31
CTSA-204ENST00000372484 PROK1P58294 105 aa13.1□□□□□ -0.31
CTSA-204ENST00000372484 STHQ8IWL8 128 aa13.1□□□□□ -0.31
CTSA-204ENST00000372484 LINC01587Q99440 93 aa13.1□□□□□ -0.31
CTSA-204ENST00000372484 SDHAF1A6NFY7 115 aa13.09□□□□□ -0.31
CTSA-204ENST00000372484 M0QY20 66 aa13.09□□□□□ -0.31
CTSA-204ENST00000372484 VCYO14598 125 aa13.09□□□□□ -0.31
CTSA-204ENST00000372484 DPM2O94777 84 aa13.09□□□□□ -0.31
CTSA-204ENST00000372484 NSUN5P1Q3KNT7 163 aa13.09□□□□□ -0.31
CTSA-204ENST00000372484 KIR2DL4Q99706 377 aa13.09□□□□□ -0.31
CTSA-204ENST00000372484 CLUHP3Q96NS8 147 aa13.09□□□□□ -0.31
CTSA-204ENST00000372484 MRPL35Q9NZE8 188 aaKnown RBP13.09□□□□□ -0.31
CTSA-204ENST00000372484 HHLA3Q9XRX5 114 aa13.09□□□□□ -0.31
CTSA-204ENST00000372484 A0A087WX48 190 aa13.08□□□□□ -0.32
CTSA-204ENST00000372484 TRBV6-5A0A0K0K1A5 114 aa13.08□□□□□ -0.32
CTSA-204ENST00000372484 ZNF415Q09FC8 603 aa13.08□□□□□ -0.32
CTSA-204ENST00000372484 FGF6P10767 208 aa13.07□□□□□ -0.32
CTSA-204ENST00000372484 NMUP48645 174 aa13.07□□□□□ -0.32
CTSA-204ENST00000372484 MPV17L2Q567V2 206 aa13.07□□□□□ -0.32
CTSA-204ENST00000372484 DEFB104AQ8WTQ1 72 aa13.07□□□□□ -0.32
CTSA-204ENST00000372484 ADARB2-AS1A8MUL3 147 aa13.07□□□□□ -0.32
CTSA-204ENST00000372484 TRPT1Q86TN4 253 aaKnown RBP13.07□□□□□ -0.32
CTSA-204ENST00000372484 XCL2Q9UBD3 114 aa13.07□□□□□ -0.32
CTSA-204ENST00000372484 TRBV27A0A0K0K1C4 114 aa13.06□□□□□ -0.32
CTSA-204ENST00000372484 M0R2P5 195 aa13.06□□□□□ -0.32
CTSA-204ENST00000372484 G0S2P27469 103 aa13.06□□□□□ -0.32
CTSA-204ENST00000372484 MORN3Q6PF18 240 aaPredicted RBP13.06□□□□□ -0.32
CTSA-204ENST00000372484 ZFP2Q6ZN57 461 aa13.06□□□□□ -0.32
CTSA-204ENST00000372484 TRAV12-1A0A0B4J245 112 aa13.06□□□□□ -0.32
CTSA-204ENST00000372484 C2orf91Q6ZV80 131 aa13.06□□□□□ -0.32
CTSA-204ENST00000372484 ERASQ7Z444 233 aa13.06□□□□□ -0.32
CTSA-204ENST00000372484 BOD1L2Q8IYS8 172 aa13.06□□□□□ -0.32
CTSA-204ENST00000372484 LINC00467Q9BRT7 94 aa13.06□□□□□ -0.32
CTSA-204ENST00000372484 CYSLTR1Q9Y271 337 aa13.06□□□□□ -0.32
CTSA-204ENST00000372484 JMJD1CQ15652 2540 aa13.05□□□□□ -0.32
CTSA-204ENST00000372484 PLNP26678 52 aa13.04□□□□□ -0.32
CTSA-204ENST00000372484 ZC2HC1BQ5TFG8 222 aa13.04□□□□□ -0.32
CTSA-204ENST00000372484 C12orf54Q6X4T0 127 aa13.04□□□□□ -0.32
CTSA-204ENST00000372484 TMEM208Q9BTX3 173 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 242.1 ms