RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 MUC5ACP98088 5654 aa0.52□□□□□ -2.33
RNU6-28P-201ENST00000362378 TANC1Q9C0D5 1861 aa0.52□□□□□ -2.33
RNU6-28P-201ENST00000362378 ABCA4P78363 2273 aa0.52□□□□□ -2.33
RNU6-28P-201ENST00000362378 MEGF8Q7Z7M0 2845 aa0.51□□□□□ -2.33
RNU6-28P-201ENST00000362378 A0A087WTM6 91 aa0.51□□□□□ -2.33
RNU6-28P-201ENST00000362378 RBAKDNA6NC62 111 aa0.51□□□□□ -2.33
RNU6-28P-201ENST00000362378 SOGA1O94964 1423 aa0.51□□□□□ -2.33
RNU6-28P-201ENST00000362378 LAMB1P07942 1786 aa0.51□□□□□ -2.33
RNU6-28P-201ENST00000362378 COPZ1P61923 177 aa0.51□□□□□ -2.33
RNU6-28P-201ENST00000362378 RRAS2P62070 204 aaPredicted RBP0.51□□□□□ -2.33
RNU6-28P-201ENST00000362378 SLC48A1Q6P1K1 146 aa0.51□□□□□ -2.33
RNU6-28P-201ENST00000362378 RBBP6Q7Z6E9 1792 aaKnown RBP0.51□□□□□ -2.33
RNU6-28P-201ENST00000362378 MDN1Q9NU22 5596 aa0.5□□□□□ -2.33
RNU6-28P-201ENST00000362378 BICRAQ9NZM4 1560 aa0.5□□□□□ -2.33
RNU6-28P-201ENST00000362378 MYOM3Q5VTT5 1437 aa0.5□□□□□ -2.33
RNU6-28P-201ENST00000362378 APCP25054 2843 aa0.5□□□□□ -2.33
RNU6-28P-201ENST00000362378 KRTAP2-3P0C7H8 128 aa0.5□□□□□ -2.33
RNU6-28P-201ENST00000362378 SSBP1Q04837 148 aaKnown RBP0.5□□□□□ -2.33
RNU6-28P-201ENST00000362378 TCEAL4Q96EI5 215 aa0.5□□□□□ -2.33
RNU6-28P-201ENST00000362378 SDF2Q99470 211 aa0.5□□□□□ -2.33
RNU6-28P-201ENST00000362378 PSMG3Q9BT73 122 aaPredicted RBP0.5□□□□□ -2.33
RNU6-28P-201ENST00000362378 KRTAP2-4Q9BYR9 128 aa0.5□□□□□ -2.33
RNU6-28P-201ENST00000362378 KRTAP2-1Q9BYU5 128 aa0.5□□□□□ -2.33
RNU6-28P-201ENST00000362378 TMEM191AQ9H0A3 160 aa0.5□□□□□ -2.33
RNU6-28P-201ENST00000362378 GUCA1AP43080 201 aaPredicted RBP0.49□□□□□ -2.33
RNU6-28P-201ENST00000362378 ARPC4P59998 168 aa0.49□□□□□ -2.33
RNU6-28P-201ENST00000362378 KRTAP21-1Q3LI58 79 aa0.49□□□□□ -2.33
RNU6-28P-201ENST00000362378 C9orf116Q5BN46 136 aaPredicted RBP0.49□□□□□ -2.33
RNU6-28P-201ENST00000362378 MUC22E2RYF6 1773 aaPredicted RBP0.49□□□□□ -2.33
RNU6-28P-201ENST00000362378 MYH6P13533 1939 aa0.48□□□□□ -2.33
RNU6-28P-201ENST00000362378 AKAP11Q9UKA4 1901 aa0.48□□□□□ -2.33
RNU6-28P-201ENST00000362378 DAPK1P53355 1430 aa0.48□□□□□ -2.33
RNU6-28P-201ENST00000362378 NAV3Q8IVL0 2385 aa0.48□□□□□ -2.33
RNU6-28P-201ENST00000362378 PLXNA1Q9UIW2 1896 aa0.48□□□□□ -2.33
RNU6-28P-201ENST00000362378 C20orf197Q8N268 126 aa0.48□□□□□ -2.33
RNU6-28P-201ENST00000362378 COX7B2Q8TF08 81 aa0.48□□□□□ -2.33
RNU6-28P-201ENST00000362378 CDK13Q14004 1512 aaKnown RBP0.48□□□□□ -2.33
RNU6-28P-201ENST00000362378 GRIN2AQ12879 1464 aa0.48□□□□□ -2.33
RNU6-28P-201ENST00000362378 IL5P05113 134 aa0.47□□□□□ -2.33
RNU6-28P-201ENST00000362378 FAM74A4Q5TZK3 123 aa0.47□□□□□ -2.33
RNU6-28P-201ENST00000362378 C4orf33Q8N1A6 199 aa0.47□□□□□ -2.33
RNU6-28P-201ENST00000362378 TMEM242Q9NWH2 141 aa0.47□□□□□ -2.33
RNU6-28P-201ENST00000362378 TNS1Q9HBL0 1735 aaKnown RBP0.47□□□□□ -2.33
RNU6-28P-201ENST00000362378 ABCA1O95477 2261 aa0.47□□□□□ -2.33
RNU6-28P-201ENST00000362378 F2Z2F3 143 aa0.46□□□□□ -2.34
RNU6-28P-201ENST00000362378 NDUFA2O43678 99 aa0.46□□□□□ -2.34
RNU6-28P-201ENST00000362378 HMGN1P05114 100 aa0.46□□□□□ -2.34
RNU6-28P-201ENST00000362378 PIPP12273 146 aaPredicted RBP0.46□□□□□ -2.34
RNU6-28P-201ENST00000362378 KCNRGQ8N5I3 272 aa0.46□□□□□ -2.34
RNU6-28P-201ENST00000362378 BPESC1Q9GZL8 116 aa0.46□□□□□ -2.34
RNU6-28P-201ENST00000362378 RPRMQ9NS64 109 aa0.46□□□□□ -2.34
RNU6-28P-201ENST00000362378 CCDC167Q9P0B6 97 aa0.46□□□□□ -2.34
RNU6-28P-201ENST00000362378 NRXN2Q9P2S2 1712 aa0.46□□□□□ -2.34
RNU6-28P-201ENST00000362378 PHIPQ8WWQ0 1821 aa0.45□□□□□ -2.34
RNU6-28P-201ENST00000362378 GVQW2A0A096LPI5 108 aaPredicted RBP0.45□□□□□ -2.34
RNU6-28P-201ENST00000362378 CCDC58Q4VC31 144 aa0.45□□□□□ -2.34
RNU6-28P-201ENST00000362378 RPL7L1Q6DKI1 246 aaKnown RBP0.45□□□□□ -2.34
RNU6-28P-201ENST00000362378 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.45□□□□□ -2.34
RNU6-28P-201ENST00000362378 C10orf82Q8WW14 230 aa0.45□□□□□ -2.34
RNU6-28P-201ENST00000362378 SPTSSAQ969W0 71 aa0.45□□□□□ -2.34
RNU6-28P-201ENST00000362378 Q96NJ1 140 aa0.45□□□□□ -2.34
RNU6-28P-201ENST00000362378 PRR15LQ9BU68 103 aa0.45□□□□□ -2.34
RNU6-28P-201ENST00000362378 V9GYV3 84 aa0.45□□□□□ -2.34
RNU6-28P-201ENST00000362378 MACF1Q9UPN3 7388 aaKnown RBP0.44□□□□□ -2.34
RNU6-28P-201ENST00000362378 NDUFB6O95139 128 aa0.44□□□□□ -2.34
RNU6-28P-201ENST00000362378 IFNA17P01571 189 aa0.44□□□□□ -2.34
RNU6-28P-201ENST00000362378 UBE2D1P51668 147 aa0.44□□□□□ -2.34
RNU6-28P-201ENST00000362378 UBE2G1P62253 170 aa0.44□□□□□ -2.34
RNU6-28P-201ENST00000362378 VMO1Q7Z5L0 202 aa0.44□□□□□ -2.34
RNU6-28P-201ENST00000362378 DPH3Q96FX2 82 aa0.44□□□□□ -2.34
RNU6-28P-201ENST00000362378 KDM6BO15054 1643 aa0.44□□□□□ -2.34
RNU6-28P-201ENST00000362378 A6NIN4 97 aa0.43□□□□□ -2.34
RNU6-28P-201ENST00000362378 CBLN1P23435 193 aa0.43□□□□□ -2.34
RNU6-28P-201ENST00000362378 SMIM11BQ8TCY0 68 aa0.43□□□□□ -2.34
RNU6-28P-201ENST00000362378 PROK2Q9HC23 129 aa0.43□□□□□ -2.34
RNU6-28P-201ENST00000362378 JMJD1CQ15652 2540 aa0.42□□□□□ -2.34
RNU6-28P-201ENST00000362378 KIAA0100Q14667 2235 aaKnown RBP0.42□□□□□ -2.34
RNU6-28P-201ENST00000362378 MED13LQ71F56 2210 aa0.42□□□□□ -2.34
RNU6-28P-201ENST00000362378 LAMC3Q9Y6N6 1575 aa0.42□□□□□ -2.34
RNU6-28P-201ENST00000362378 TRBV7-1A0A0A6YYK4 115 aa0.42□□□□□ -2.34
RNU6-28P-201ENST00000362378 CLPSL1A2RUU4 121 aa0.42□□□□□ -2.34
RNU6-28P-201ENST00000362378 SELENOWP63302 87 aa0.42□□□□□ -2.34
RNU6-28P-201ENST00000362378 KMT2DO14686 5537 aa0.42□□□□□ -2.34
RNU6-28P-201ENST00000362378 IBTKQ9P2D0 1353 aaPredicted RBP0.42□□□□□ -2.34
RNU6-28P-201ENST00000362378 SSC5DA1L4H1 1573 aa0.41□□□□□ -2.34
RNU6-28P-201ENST00000362378 FAM92AA1XBS5 289 aa0.41□□□□□ -2.34
RNU6-28P-201ENST00000362378 SNCGO76070 127 aa0.41□□□□□ -2.34
RNU6-28P-201ENST00000362378 SPINK6Q6UWN8 80 aa0.41□□□□□ -2.34
RNU6-28P-201ENST00000362378 ZNF818PQ6ZRF7 136 aa0.41□□□□□ -2.34
RNU6-28P-201ENST00000362378 ARL11Q969Q4 196 aa0.41□□□□□ -2.34
RNU6-28P-201ENST00000362378 LINC00470Q9BZP3 86 aa0.41□□□□□ -2.34
RNU6-28P-201ENST00000362378 FAM107BQ9H098 131 aa0.41□□□□□ -2.34
RNU6-28P-201ENST00000362378 ZNF518AQ6AHZ1 1483 aa0.41□□□□□ -2.34
RNU6-28P-201ENST00000362378 BDP1A6H8Y1 2624 aa0.4□□□□□ -2.34
RNU6-28P-201ENST00000362378 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
RNU6-28P-201ENST00000362378 EDDM3BP56851 147 aa0.4□□□□□ -2.35
RNU6-28P-201ENST00000362378 TSC22D3Q99576 134 aa0.4□□□□□ -2.35
RNU6-28P-201ENST00000362378 PARP14Q460N5 1801 aa0.39□□□□□ -2.35
RNU6-28P-201ENST00000362378 TRBV10-3A0A0K0K1G6 114 aa0.39□□□□□ -2.35
RNU6-28P-201ENST00000362378 K7EP13 123 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms