RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 TOMM6Q96B49 74 aa15.33■□□□□ 0.05
COL13A1-202ENST00000357811 PRORYQ9H606 182 aa15.33■□□□□ 0.05
COL13A1-202ENST00000357811 HTN1P15515 57 aa15.33■□□□□ 0.04
COL13A1-202ENST00000357811 CRIP2P52943 208 aaPredicted RBP15.33■□□□□ 0.04
COL13A1-202ENST00000357811 NDUFS8O00217 210 aa15.32■□□□□ 0.04
COL13A1-202ENST00000357811 NEXN-AS1Q8NBZ9 246 aa15.32■□□□□ 0.04
COL13A1-202ENST00000357811 PHLDA1Q8WV24 401 aaPredicted RBP15.32■□□□□ 0.04
COL13A1-202ENST00000357811 ZNF256Q9Y2P7 627 aaPredicted RBP15.32■□□□□ 0.04
COL13A1-202ENST00000357811 CCDC168Q8NDH2 2452 aa15.32■□□□□ 0.04
COL13A1-202ENST00000357811 HLA-DRB4P13762 266 aa15.31■□□□□ 0.04
COL13A1-202ENST00000357811 WFDC2Q14508 124 aa15.31■□□□□ 0.04
COL13A1-202ENST00000357811 HIST2H2BDQ6DRA6 164 aa15.31■□□□□ 0.04
COL13A1-202ENST00000357811 HLA-DRB4X5D2U9 266 aa15.31■□□□□ 0.04
COL13A1-202ENST00000357811 CKS1BP61024 79 aa15.31■□□□□ 0.04
COL13A1-202ENST00000357811 PRADC1Q9BSG0 188 aa15.31■□□□□ 0.04
COL13A1-202ENST00000357811 TP53TG1Q9Y2A0 90 aa15.31■□□□□ 0.04
COL13A1-202ENST00000357811 SH2D6Q7Z4S9 175 aa15.3■□□□□ 0.04
COL13A1-202ENST00000357811 MDFICQ9P1T7 246 aa15.3■□□□□ 0.04
COL13A1-202ENST00000357811 C12orf74Q32Q52 190 aa15.3■□□□□ 0.04
COL13A1-202ENST00000357811 TM2D2Q9BX73 214 aa15.3■□□□□ 0.04
COL13A1-202ENST00000357811 H3BMG7 143 aa15.3■□□□□ 0.04
COL13A1-202ENST00000357811 FAM19A4Q96LR4 140 aa15.3■□□□□ 0.04
COL13A1-202ENST00000357811 C20orf78Q9BR46 151 aa15.3■□□□□ 0.04
COL13A1-202ENST00000357811 NF1P21359 2839 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 IGLV1-40P01703 118 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 SLC25A16P16260 332 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 DEFB112Q30KQ8 113 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 SUMO4Q6EEV6 95 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 SCGB1D4Q6XE38 83 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 C2CD3Q4AC94 2353 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 SPINK13Q1W4C9 94 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 ZNF479Q96JC4 524 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 TRAV26-1A0A087WT03 109 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 MYMXA0A1B0GTQ4 84 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 IGLL5B9A064 214 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 ETDBQ3ZM63 59 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 DCANP1Q8TF63 244 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 PLEKHB2Q96CS7 222 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 ZNF815PA8K554 130 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 SYNJ2BPP57105 145 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 OPRPNQ99935 248 aaPredicted RBP15.28■□□□□ 0.04
COL13A1-202ENST00000357811 LINC00315P59091 139 aa15.27■□□□□ 0.04
COL13A1-202ENST00000357811 NACAE9PAV3 2078 aa15.27■□□□□ 0.04
COL13A1-202ENST00000357811 LGALS1P09382 135 aaKnown RBP15.27■□□□□ 0.03
COL13A1-202ENST00000357811 TRAV12-1A0A0B4J245 112 aa15.26■□□□□ 0.03
COL13A1-202ENST00000357811 TMEM238LA0A1B0GVL6 79 aa15.26■□□□□ 0.03
COL13A1-202ENST00000357811 PRM2P04554 102 aa15.26■□□□□ 0.03
COL13A1-202ENST00000357811 SCGB1A1P11684 91 aa15.26■□□□□ 0.03
COL13A1-202ENST00000357811 TSHBP01222 138 aa15.26■□□□□ 0.03
COL13A1-202ENST00000357811 C11orf86A6NJI1 115 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 J3QR89 54 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 CRYGDP07320 174 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 ZNF56Q15929 161 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 KIF25-AS1Q9Y6Z4 181 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 CHD6Q8TD26 2715 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 SDHAF1A6NFY7 115 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 KLLNB2CW77 178 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 ID1P41134 155 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 CRYBA4P53673 196 aa15.24■□□□□ 0.03
COL13A1-202ENST00000357811 SRSF9Q13242 221 aaKnown RBP eCLIP15.24■□□□□ 0.03
COL13A1-202ENST00000357811 ZFP2Q6ZN57 461 aa15.24■□□□□ 0.03
COL13A1-202ENST00000357811 IGHV3-73A0A0B4J1V6 119 aa15.24■□□□□ 0.03
COL13A1-202ENST00000357811 TRBV7-3A0A075B6L6 115 aa15.23■□□□□ 0.03
COL13A1-202ENST00000357811 B4DSR2 109 aa15.23■□□□□ 0.03
COL13A1-202ENST00000357811 H3BUA1 57 aa15.23■□□□□ 0.03
COL13A1-202ENST00000357811 TMEM170BQ5T4T1 132 aa15.23■□□□□ 0.03
COL13A1-202ENST00000357811 Q8N1Y9 231 aa15.23■□□□□ 0.03
COL13A1-202ENST00000357811 NIPBLQ6KC79 2804 aaeCLIP15.23■□□□□ 0.03
COL13A1-202ENST00000357811 TGFAP01135 160 aa15.23■□□□□ 0.03
COL13A1-202ENST00000357811 SPAG8Q99932 426 aaPredicted RBP15.23■□□□□ 0.03
COL13A1-202ENST00000357811 IGHV3-64A0A075B6Q5 118 aa15.22■□□□□ 0.03
COL13A1-202ENST00000357811 E9PLD3 99 aa15.22■□□□□ 0.03
COL13A1-202ENST00000357811 PSMB8P28062 276 aa15.22■□□□□ 0.03
COL13A1-202ENST00000357811 INSL3P51460 131 aa15.22■□□□□ 0.03
COL13A1-202ENST00000357811 CFHR3Q02985 330 aa15.22■□□□□ 0.03
COL13A1-202ENST00000357811 SPANXB1Q9NS25 103 aaPredicted RBP15.22■□□□□ 0.03
COL13A1-202ENST00000357811 DEFB136Q30KP8 78 aa15.21■□□□□ 0.03
COL13A1-202ENST00000357811 KIR2DL4Q99706 377 aa15.21■□□□□ 0.03
COL13A1-202ENST00000357811 JMJD1CQ15652 2540 aa15.21■□□□□ 0.03
COL13A1-202ENST00000357811 APOMO95445 188 aa15.21■□□□□ 0.03
COL13A1-202ENST00000357811 APRG1Q8IVJ8 170 aa15.21■□□□□ 0.02
COL13A1-202ENST00000357811 FOXI2Q6ZQN5 318 aa15.2■□□□□ 0.02
COL13A1-202ENST00000357811 DUX3Q96PT4 197 aa15.19■□□□□ 0.02
COL13A1-202ENST00000357811 PGPEP1Q9NXJ5 209 aa15.19■□□□□ 0.02
COL13A1-202ENST00000357811 PRRC2AP48634 2157 aaKnown RBP15.19■□□□□ 0.02
COL13A1-202ENST00000357811 IGLV4-69A0A075B6H9 119 aa15.19■□□□□ 0.02
COL13A1-202ENST00000357811 POLR2KP53803 58 aaKnown RBP15.18■□□□□ 0.02
COL13A1-202ENST00000357811 MRPL16Q9NX20 251 aaKnown RBP15.18■□□□□ 0.02
COL13A1-202ENST00000357811 PRB1P04280 392 aa15.18■□□□□ 0.02
COL13A1-202ENST00000357811 C18orf65Q6ZTR6 163 aa15.18■□□□□ 0.02
COL13A1-202ENST00000357811 GEMIN7Q9H840 131 aaKnown RBP15.18■□□□□ 0.02
COL13A1-202ENST00000357811 BEX4Q9NWD9 120 aaPredicted RBP15.18■□□□□ 0.02
COL13A1-202ENST00000357811 IGHV4OR15-8A0A075B7B6 117 aa15.18■□□□□ 0.02
COL13A1-202ENST00000357811 A0A087WW49 117 aa15.18■□□□□ 0.02
COL13A1-202ENST00000357811 IGIPA6NJ69 53 aa15.18■□□□□ 0.02
COL13A1-202ENST00000357811 MED14OSP0DP75 135 aa15.18■□□□□ 0.02
COL13A1-202ENST00000357811 TSPEAR-AS2P59090 65 aa15.18■□□□□ 0.02
COL13A1-202ENST00000357811 SNRPD3P62318 126 aaKnown RBP15.18■□□□□ 0.02
COL13A1-202ENST00000357811 IGHV3-16A0A0C4DH30 117 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 LINC01549A6NIU2 74 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms