RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 EIF5AL1Q6IS14 154 aaKnown RBP11.96□□□□□ -0.49
CKLF-202ENST00000345436 KCNIP4Q6PIL6 250 aa11.96□□□□□ -0.49
CKLF-202ENST00000345436 SFRP2Q96HF1 295 aa11.96□□□□□ -0.49
CKLF-202ENST00000345436 KRTAP4-5Q9BYR2 181 aa11.96□□□□□ -0.49
CKLF-202ENST00000345436 COX11Q9Y6N1 276 aa11.96□□□□□ -0.49
CKLF-202ENST00000345436 TEX46H3BTG2 121 aa11.95□□□□□ -0.5
CKLF-202ENST00000345436 M0R381 172 aa11.95□□□□□ -0.5
CKLF-202ENST00000345436 Q6ZSN1 163 aa11.95□□□□□ -0.5
CKLF-202ENST00000345436 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.95□□□□□ -0.5
CKLF-202ENST00000345436 TMSB15BA0A087X1C1 80 aa11.94□□□□□ -0.5
CKLF-202ENST00000345436 IGLV5-52A0A0A0MRZ9 124 aa11.94□□□□□ -0.5
CKLF-202ENST00000345436 TRBV10-1A0A0K0K1A3 114 aa11.94□□□□□ -0.5
CKLF-202ENST00000345436 EPM2AB3EWF7 344 aa11.94□□□□□ -0.5
CKLF-202ENST00000345436 UFSP1Q6NVU6 142 aa11.94□□□□□ -0.5
CKLF-202ENST00000345436 BAGE2Q86Y30 109 aa11.94□□□□□ -0.5
CKLF-202ENST00000345436 RMI2Q96E14 147 aa11.94□□□□□ -0.5
CKLF-202ENST00000345436 SAMD10Q9BYL1 202 aa11.94□□□□□ -0.5
CKLF-202ENST00000345436 JPT2Q9H910 190 aa11.94□□□□□ -0.5
CKLF-202ENST00000345436 LRP1BQ9NZR2 4599 aa11.94□□□□□ -0.5
CKLF-202ENST00000345436 CXCL1P09341 107 aa11.93□□□□□ -0.5
CKLF-202ENST00000345436 RPL36AP83881 106 aaKnown RBP11.93□□□□□ -0.5
CKLF-202ENST00000345436 ELOBQ15370 118 aa11.93□□□□□ -0.5
CKLF-202ENST00000345436 C14orf178Q8N769 122 aaPredicted RBP11.93□□□□□ -0.5
CKLF-202ENST00000345436 RPL36ALQ969Q0 106 aaKnown RBP11.93□□□□□ -0.5
CKLF-202ENST00000345436 A0A087WWL8 130 aa11.92□□□□□ -0.5
CKLF-202ENST00000345436 A0A1B0GV50 99 aa11.92□□□□□ -0.5
CKLF-202ENST00000345436 RAB5CP51148 216 aa11.92□□□□□ -0.5
CKLF-202ENST00000345436 FRZBQ92765 325 aa11.92□□□□□ -0.5
CKLF-202ENST00000345436 LRCOL1A6NCL2 159 aa11.91□□□□□ -0.5
CKLF-202ENST00000345436 LINC00694P0DN24 101 aa11.91□□□□□ -0.5
CKLF-202ENST00000345436 TMUB2Q71RG4 321 aa11.91□□□□□ -0.5
CKLF-202ENST00000345436 Q8N814 137 aa11.91□□□□□ -0.5
CKLF-202ENST00000345436 MANBALQ9NQG1 85 aa11.91□□□□□ -0.5
CKLF-202ENST00000345436 HSPG2P98160 4391 aa11.9□□□□□ -0.5
CKLF-202ENST00000345436 A0A087WX48 190 aa11.9□□□□□ -0.5
CKLF-202ENST00000345436 FUSP35637 526 aaKnown RBP eCLIP11.9□□□□□ -0.5
CKLF-202ENST00000345436 CHCHD7Q9BUK0 85 aa11.9□□□□□ -0.5
CKLF-202ENST00000345436 TRBV7-3A0A075B6L6 115 aa11.89□□□□□ -0.51
CKLF-202ENST00000345436 SCO2A0A1W2PP80 73 aa11.89□□□□□ -0.51
CKLF-202ENST00000345436 KRTAP10-1P60331 282 aa11.89□□□□□ -0.51
CKLF-202ENST00000345436 RAB4BP61018 213 aa11.89□□□□□ -0.51
CKLF-202ENST00000345436 SPANXN1Q5VSR9 72 aa11.89□□□□□ -0.51
CKLF-202ENST00000345436 DNAH5Q8TE73 4624 aa11.88□□□□□ -0.51
CKLF-202ENST00000345436 SMIM17P0DL12 118 aa11.88□□□□□ -0.51
CKLF-202ENST00000345436 DAZAP1Q96EP5 407 aaKnown RBP11.88□□□□□ -0.51
CKLF-202ENST00000345436 TMEM70Q9BUB7 260 aa11.88□□□□□ -0.51
CKLF-202ENST00000345436 MLST8Q9BVC4 326 aa11.88□□□□□ -0.51
CKLF-202ENST00000345436 OR5AL1P0C617 328 aa11.87□□□□□ -0.51
CKLF-202ENST00000345436 XGP55808 180 aa11.87□□□□□ -0.51
CKLF-202ENST00000345436 PKIAP61925 76 aa11.87□□□□□ -0.51
CKLF-202ENST00000345436 PRR27Q6MZM9 219 aa11.87□□□□□ -0.51
CKLF-202ENST00000345436 DAZ4Q86SG3 579 aaKnown RBP11.87□□□□□ -0.51
CKLF-202ENST00000345436 DAZ3Q9NR90 486 aaKnown RBP11.87□□□□□ -0.51
CKLF-202ENST00000345436 GNG13Q9P2W3 67 aa11.87□□□□□ -0.51
CKLF-202ENST00000345436 TRAV1-1A0A0B4J248 108 aa11.86□□□□□ -0.51
CKLF-202ENST00000345436 FAM229AH3BQW9 127 aa11.86□□□□□ -0.51
CKLF-202ENST00000345436 ZNF56Q15929 161 aa11.86□□□□□ -0.51
CKLF-202ENST00000345436 TMEM97Q5BJF2 176 aa11.86□□□□□ -0.51
CKLF-202ENST00000345436 NIT1Q86X76 327 aa11.86□□□□□ -0.51
CKLF-202ENST00000345436 TMEM262E9PQX1 116 aa11.85□□□□□ -0.51
CKLF-202ENST00000345436 F5H697 171 aa11.85□□□□□ -0.51
CKLF-202ENST00000345436 IFNA1P01562 189 aa11.85□□□□□ -0.51
CKLF-202ENST00000345436 RPL35P42766 123 aaKnown RBP11.85□□□□□ -0.51
CKLF-202ENST00000345436 RPS20P60866 119 aaKnown RBP11.85□□□□□ -0.51
CKLF-202ENST00000345436 UBE2D3P61077 147 aa11.85□□□□□ -0.51
CKLF-202ENST00000345436 UBE2D2P62837 147 aa11.85□□□□□ -0.51
CKLF-202ENST00000345436 Q0VG73 95 aa11.85□□□□□ -0.51
CKLF-202ENST00000345436 OR10G8Q8NGN5 311 aa11.85□□□□□ -0.51
CKLF-202ENST00000345436 SSBP4Q9BWG4 385 aaPredicted RBP11.85□□□□□ -0.51
CKLF-202ENST00000345436 BIN3Q9NQY0 253 aa11.85□□□□□ -0.51
CKLF-202ENST00000345436 Q9UF83 564 aa11.85□□□□□ -0.51
CKLF-202ENST00000345436 ABCA13Q86UQ4 5058 aa11.85□□□□□ -0.51
CKLF-202ENST00000345436 XKRY2A2RUG3 117 aa11.84□□□□□ -0.51
CKLF-202ENST00000345436 SNAI2O43623 268 aa11.84□□□□□ -0.51
CKLF-202ENST00000345436 C1QBP02746 253 aa11.84□□□□□ -0.51
CKLF-202ENST00000345436 Q8N976 141 aa11.84□□□□□ -0.51
CKLF-202ENST00000345436 PDE6DO43924 150 aa11.83□□□□□ -0.52
CKLF-202ENST00000345436 RPL19P84098 196 aaKnown RBP11.83□□□□□ -0.52
CKLF-202ENST00000345436 OR10AG1Q8NH19 301 aa11.83□□□□□ -0.52
CKLF-202ENST00000345436 C11orf52Q96A22 123 aa11.83□□□□□ -0.52
CKLF-202ENST00000345436 SMIM12Q96EX1 92 aa11.83□□□□□ -0.52
CKLF-202ENST00000345436 KLK12Q9UKR0 248 aa11.83□□□□□ -0.52
CKLF-202ENST00000345436 IGKV2D-24A0A075B6R9 120 aa11.82□□□□□ -0.52
CKLF-202ENST00000345436 RBFOX3A6NFN3 312 aa11.82□□□□□ -0.52
CKLF-202ENST00000345436 INAFM2P0DMQ5 153 aa11.82□□□□□ -0.52
CKLF-202ENST00000345436 AP1S3Q96PC3 154 aa11.82□□□□□ -0.52
CKLF-202ENST00000345436 APOBP04114 4563 aaKnown RBP11.81□□□□□ -0.52
CKLF-202ENST00000345436 TRBV6-8A0A0A6YYG3 113 aa11.81□□□□□ -0.52
CKLF-202ENST00000345436 TAGLN2P37802 199 aaKnown RBP11.81□□□□□ -0.52
CKLF-202ENST00000345436 GNG4P50150 75 aa11.81□□□□□ -0.52
CKLF-202ENST00000345436 Q5VSD8 79 aa11.81□□□□□ -0.52
CKLF-202ENST00000345436 Q8N3U1 123 aa11.81□□□□□ -0.52
CKLF-202ENST00000345436 UBE2WQ96B02 151 aa11.81□□□□□ -0.52
CKLF-202ENST00000345436 H7C1H1 209 aa11.8□□□□□ -0.52
CKLF-202ENST00000345436 CRPP02741 224 aa11.8□□□□□ -0.52
CKLF-202ENST00000345436 SULT1A2P50226 295 aa11.8□□□□□ -0.52
CKLF-202ENST00000345436 CACNG7P62955 275 aa11.8□□□□□ -0.52
CKLF-202ENST00000345436 CCL20P78556 96 aa11.8□□□□□ -0.52
CKLF-202ENST00000345436 MEF2BQ02080 365 aaPredicted RBP11.8□□□□□ -0.52
CKLF-202ENST00000345436 CENPWQ5EE01 88 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms