RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 NTF3P20783 257 aa9.78□□□□□ -0.84
TPM4-202ENST00000344824 CACNG7P62955 275 aa9.78□□□□□ -0.84
TPM4-202ENST00000344824 ZNF493Q6ZR52 646 aa9.78□□□□□ -0.84
TPM4-202ENST00000344824 ZFP82Q8N141 532 aa9.78□□□□□ -0.84
TPM4-202ENST00000344824 YPEL4Q96NS1 127 aa9.78□□□□□ -0.84
TPM4-202ENST00000344824 APLNQ9ULZ1 77 aa9.78□□□□□ -0.84
TPM4-202ENST00000344824 TRAV9-1A0A075B6T8 112 aa9.77□□□□□ -0.85
TPM4-202ENST00000344824 TRGV1A0A0A0MS02 117 aa9.77□□□□□ -0.85
TPM4-202ENST00000344824 PLAC8L1A1L4L8 177 aa9.77□□□□□ -0.85
TPM4-202ENST00000344824 LYRM9A8MSI8 78 aa9.77□□□□□ -0.85
TPM4-202ENST00000344824 TCTAP57738 103 aa9.77□□□□□ -0.85
TPM4-202ENST00000344824 RAB4BP61018 213 aa9.77□□□□□ -0.85
TPM4-202ENST00000344824 ZNF876PQ49A33 203 aa9.77□□□□□ -0.85
TPM4-202ENST00000344824 LGALS9CQ6DKI2 356 aa9.77□□□□□ -0.85
TPM4-202ENST00000344824 SYT8Q8NBV8 401 aa9.77□□□□□ -0.85
TPM4-202ENST00000344824 FAM210BQ96KR6 192 aa9.77□□□□□ -0.85
TPM4-202ENST00000344824 SPXQ9BT56 116 aa9.77□□□□□ -0.85
TPM4-202ENST00000344824 NDUFAF3Q9BU61 184 aa9.77□□□□□ -0.85
TPM4-202ENST00000344824 M0R2P5 195 aa9.76□□□□□ -0.85
TPM4-202ENST00000344824 HBBP68871 147 aa9.76□□□□□ -0.85
TPM4-202ENST00000344824 KMT2AQ03164 3969 aa9.75□□□□□ -0.85
TPM4-202ENST00000344824 TRBV24-1A0A075B6N3 115 aa9.75□□□□□ -0.85
TPM4-202ENST00000344824 COLCA2A8K830 154 aa9.75□□□□□ -0.85
TPM4-202ENST00000344824 Q6ZTI0 123 aa9.75□□□□□ -0.85
TPM4-202ENST00000344824 ATP5L2Q7Z4Y8 100 aa9.75□□□□□ -0.85
TPM4-202ENST00000344824 JPT2Q9H910 190 aa9.75□□□□□ -0.85
TPM4-202ENST00000344824 A0A1B0GXF2 115 aa9.74□□□□□ -0.85
TPM4-202ENST00000344824 GAGE12BA1L429 117 aa9.74□□□□□ -0.85
TPM4-202ENST00000344824 GAGE7O76087 117 aa9.74□□□□□ -0.85
TPM4-202ENST00000344824 GAGE12FP0CL80 117 aa9.74□□□□□ -0.85
TPM4-202ENST00000344824 GAGE12GP0CL81 117 aa9.74□□□□□ -0.85
TPM4-202ENST00000344824 GAGE12IP0CL82 117 aa9.74□□□□□ -0.85
TPM4-202ENST00000344824 WDR73Q6P4I2 378 aa9.74□□□□□ -0.85
TPM4-202ENST00000344824 CNFNQ9BYD5 112 aa9.74□□□□□ -0.85
TPM4-202ENST00000344824 EPPK1P58107 5090 aaKnown RBP9.74□□□□□ -0.85
TPM4-202ENST00000344824 NXPH4O95158 308 aa9.73□□□□□ -0.85
TPM4-202ENST00000344824 DAZ2Q13117 558 aaKnown RBP9.73□□□□□ -0.85
TPM4-202ENST00000344824 AP1S3Q96PC3 154 aa9.73□□□□□ -0.85
TPM4-202ENST00000344824 VPS13DQ5THJ4 4388 aa9.73□□□□□ -0.85
TPM4-202ENST00000344824 A0A087WWL8 130 aa9.73□□□□□ -0.85
TPM4-202ENST00000344824 A0A1B0GW15 77 aa9.73□□□□□ -0.85
TPM4-202ENST00000344824 F5H768 121 aa9.73□□□□□ -0.85
TPM4-202ENST00000344824 S100A8P05109 93 aa9.73□□□□□ -0.85
TPM4-202ENST00000344824 MGPP08493 103 aa9.73□□□□□ -0.85
TPM4-202ENST00000344824 TRGC1P0CF51 173 aa9.73□□□□□ -0.85
TPM4-202ENST00000344824 EVI2AP22794 236 aa9.73□□□□□ -0.85
TPM4-202ENST00000344824 RPS10P46783 165 aaKnown RBP9.73□□□□□ -0.85
TPM4-202ENST00000344824 FAM74A4Q5TZK3 123 aa9.73□□□□□ -0.85
TPM4-202ENST00000344824 SMIM15Q7Z3B0 74 aa9.73□□□□□ -0.85
TPM4-202ENST00000344824 UBE2DNLQ8IWF7 75 aa9.73□□□□□ -0.85
TPM4-202ENST00000344824 C14orf178Q8N769 122 aaPredicted RBP9.73□□□□□ -0.85
TPM4-202ENST00000344824 NACAE9PAV3 2078 aa9.73□□□□□ -0.85
TPM4-202ENST00000344824 TRGV2A0A075B6R0 118 aa9.72□□□□□ -0.85
TPM4-202ENST00000344824 IGHV3-73A0A0B4J1V6 119 aa9.72□□□□□ -0.85
TPM4-202ENST00000344824 IGHV3-53P01767 116 aa9.72□□□□□ -0.85
TPM4-202ENST00000344824 ATP5G1P05496 136 aa9.72□□□□□ -0.85
TPM4-202ENST00000344824 SMIM17P0DL12 118 aa9.72□□□□□ -0.85
TPM4-202ENST00000344824 RAB5AP20339 215 aa9.72□□□□□ -0.85
TPM4-202ENST00000344824 TMEM136Q6ZRR5 245 aa9.72□□□□□ -0.85
TPM4-202ENST00000344824 FRZBQ92765 325 aa9.72□□□□□ -0.85
TPM4-202ENST00000344824 SAMD10Q9BYL1 202 aa9.72□□□□□ -0.85
TPM4-202ENST00000344824 RASL11AQ6T310 242 aa9.71□□□□□ -0.86
TPM4-202ENST00000344824 AMN1Q8IY45 258 aa9.71□□□□□ -0.86
TPM4-202ENST00000344824 RASL10AQ92737 203 aa9.71□□□□□ -0.86
TPM4-202ENST00000344824 TRAPPC1Q9Y5R8 145 aa9.71□□□□□ -0.86
TPM4-202ENST00000344824 P0DMU3 169 aa9.7□□□□□ -0.86
TPM4-202ENST00000344824 FAM231AP0DMU4 169 aa9.7□□□□□ -0.86
TPM4-202ENST00000344824 FAM231CP0DMU5 169 aa9.7□□□□□ -0.86
TPM4-202ENST00000344824 LGALS9BQ3B8N2 356 aa9.7□□□□□ -0.86
TPM4-202ENST00000344824 PTH2Q96A98 100 aa9.7□□□□□ -0.86
TPM4-202ENST00000344824 TMEM191AQ9H0A3 160 aa9.7□□□□□ -0.86
TPM4-202ENST00000344824 MRPL18Q9H0U6 180 aaKnown RBP9.7□□□□□ -0.86
TPM4-202ENST00000344824 DPH3P1Q9H4G8 78 aa9.7□□□□□ -0.86
TPM4-202ENST00000344824 DNAH6Q9C0G6 4158 aa9.7□□□□□ -0.86
TPM4-202ENST00000344824 A8MWV9 139 aa9.69□□□□□ -0.86
TPM4-202ENST00000344824 HLA-DQA1P01909 254 aa9.69□□□□□ -0.86
TPM4-202ENST00000344824 FABP9Q0Z7S8 132 aa9.69□□□□□ -0.86
TPM4-202ENST00000344824 KIAA1644Q3SXP7 199 aa9.69□□□□□ -0.86
TPM4-202ENST00000344824 COX19Q49B96 90 aa9.69□□□□□ -0.86
TPM4-202ENST00000344824 CFAP126Q5VTH2 177 aa9.69□□□□□ -0.86
TPM4-202ENST00000344824 OR4C5Q8NGB2 326 aa9.69□□□□□ -0.86
TPM4-202ENST00000344824 GNB1LQ9BYB4 327 aa9.69□□□□□ -0.86
TPM4-202ENST00000344824 F5H697 171 aa9.68□□□□□ -0.86
TPM4-202ENST00000344824 RS1O15537 224 aa9.68□□□□□ -0.86
TPM4-202ENST00000344824 NUDT3O95989 172 aa9.68□□□□□ -0.86
TPM4-202ENST00000344824 APCSP02743 223 aa9.68□□□□□ -0.86
TPM4-202ENST00000344824 SLAQ13239 276 aa9.68□□□□□ -0.86
TPM4-202ENST00000344824 ZNF56Q15929 161 aa9.68□□□□□ -0.86
TPM4-202ENST00000344824 POM121L12Q8N7R1 296 aa9.68□□□□□ -0.86
TPM4-202ENST00000344824 GATD1Q8NB37 220 aa9.68□□□□□ -0.86
TPM4-202ENST00000344824 ZNF479Q96JC4 524 aa9.68□□□□□ -0.86
TPM4-202ENST00000344824 TRAV26-2A0A0B4J265 109 aa9.67□□□□□ -0.86
TPM4-202ENST00000344824 TRAV4A0A0B4J268 109 aa9.67□□□□□ -0.86
TPM4-202ENST00000344824 MT-ND6P03923 174 aa9.67□□□□□ -0.86
TPM4-202ENST00000344824 TRGC2P03986 189 aa9.67□□□□□ -0.86
TPM4-202ENST00000344824 CRYGDP07320 174 aa9.67□□□□□ -0.86
TPM4-202ENST00000344824 PIK3CD-AS1Q5SR53 167 aa9.67□□□□□ -0.86
TPM4-202ENST00000344824 FAM104BQ5XKR9 115 aa9.67□□□□□ -0.86
TPM4-202ENST00000344824 RNF185Q96GF1 192 aa9.67□□□□□ -0.86
TPM4-202ENST00000344824 KIF25-AS1Q9Y6Z4 181 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms