RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 RRN3P1Q2M238 152 aa17.95■□□□□ 0.46
NELFB-201ENST00000343053 DUX5Q96PT3 197 aa17.95■□□□□ 0.46
NELFB-201ENST00000343053 MDFICQ9P1T7 246 aa17.95■□□□□ 0.46
NELFB-201ENST00000343053 ANKRD17O75179 2603 aaKnown RBP17.94■□□□□ 0.46
NELFB-201ENST00000343053 IGSF10Q6WRI0 2623 aa17.94■□□□□ 0.46
NELFB-201ENST00000343053 ZFP2Q6ZN57 461 aa17.94■□□□□ 0.46
NELFB-201ENST00000343053 DCANP1Q8TF63 244 aa17.94■□□□□ 0.46
NELFB-201ENST00000343053 PGPEP1Q9NXJ5 209 aa17.94■□□□□ 0.46
NELFB-201ENST00000343053 DOPEY1Q5JWR5 2465 aa17.94■□□□□ 0.46
NELFB-201ENST00000343053 KLLNB2CW77 178 aa17.94■□□□□ 0.46
NELFB-201ENST00000343053 IGLV1-40P01703 118 aa17.94■□□□□ 0.46
NELFB-201ENST00000343053 SRSF9Q13242 221 aaKnown RBP eCLIP17.94■□□□□ 0.46
NELFB-201ENST00000343053 FAM208BQ5VWN6 2430 aa17.94■□□□□ 0.46
NELFB-201ENST00000343053 MSMBP08118 114 aa17.93■□□□□ 0.46
NELFB-201ENST00000343053 APRG1Q8IVJ8 170 aa17.93■□□□□ 0.46
NELFB-201ENST00000343053 OPRPNQ99935 248 aaPredicted RBP17.93■□□□□ 0.46
NELFB-201ENST00000343053 IGLV4-69A0A075B6H9 119 aa17.93■□□□□ 0.46
NELFB-201ENST00000343053 MAPK1IP1LQ8NDC0 245 aa17.93■□□□□ 0.46
NELFB-201ENST00000343053 SDHAF1A6NFY7 115 aa17.92■□□□□ 0.46
NELFB-201ENST00000343053 MORN3Q6PF18 240 aaPredicted RBP17.92■□□□□ 0.46
NELFB-201ENST00000343053 PIEZO1Q92508 2521 aa17.92■□□□□ 0.46
NELFB-201ENST00000343053 ACACBO00763 2458 aa17.92■□□□□ 0.46
NELFB-201ENST00000343053 IGHV4-59P01825 116 aa17.92■□□□□ 0.46
NELFB-201ENST00000343053 MED14OSP0DP75 135 aa17.92■□□□□ 0.46
NELFB-201ENST00000343053 MRPL16Q9NX20 251 aaKnown RBP17.92■□□□□ 0.46
NELFB-201ENST00000343053 APOMO95445 188 aa17.91■□□□□ 0.46
NELFB-201ENST00000343053 ZNF56Q15929 161 aa17.91■□□□□ 0.46
NELFB-201ENST00000343053 SPINK13Q1W4C9 94 aa17.91■□□□□ 0.46
NELFB-201ENST00000343053 TMEM170BQ5T4T1 132 aa17.91■□□□□ 0.46
NELFB-201ENST00000343053 SPANXB1Q9NS25 103 aaPredicted RBP17.91■□□□□ 0.46
NELFB-201ENST00000343053 ZFYVE26Q68DK2 2539 aa17.9■□□□□ 0.46
NELFB-201ENST00000343053 H3BUA1 57 aa17.9■□□□□ 0.46
NELFB-201ENST00000343053 GTSF1LQ9H1H1 148 aa17.9■□□□□ 0.46
NELFB-201ENST00000343053 LINC01549A6NIU2 74 aa17.9■□□□□ 0.46
NELFB-201ENST00000343053 INSL3P51460 131 aa17.9■□□□□ 0.46
NELFB-201ENST00000343053 TSPEAR-AS2P59090 65 aa17.9■□□□□ 0.46
NELFB-201ENST00000343053 HOXA3O43365 443 aaPredicted RBP17.89■□□□□ 0.45
NELFB-201ENST00000343053 NXPH4O95158 308 aa17.89■□□□□ 0.45
NELFB-201ENST00000343053 COX6B1P14854 86 aa17.89■□□□□ 0.45
NELFB-201ENST00000343053 ID1P41134 155 aa17.89■□□□□ 0.45
NELFB-201ENST00000343053 KIR2DL4Q99706 377 aa17.89■□□□□ 0.45
NELFB-201ENST00000343053 IGIPA6NJ69 53 aa17.88■□□□□ 0.45
NELFB-201ENST00000343053 HTN1P15515 57 aa17.88■□□□□ 0.45
NELFB-201ENST00000343053 POLR2KP53803 58 aaKnown RBP17.88■□□□□ 0.45
NELFB-201ENST00000343053 TSSC4Q9Y5U2 329 aaPredicted RBP17.88■□□□□ 0.45
NELFB-201ENST00000343053 MYO9AB2RTY4 2548 aa17.88■□□□□ 0.45
NELFB-201ENST00000343053 IGHV3-64A0A075B6Q5 118 aa17.87■□□□□ 0.45
NELFB-201ENST00000343053 LOC107984156A0A0G2JMH3 177 aa17.87■□□□□ 0.45
NELFB-201ENST00000343053 TGFAP01135 160 aa17.87■□□□□ 0.45
NELFB-201ENST00000343053 CFHR3Q02985 330 aa17.87■□□□□ 0.45
NELFB-201ENST00000343053 GAGE13Q4V321 117 aa17.87■□□□□ 0.45
NELFB-201ENST00000343053 ARL17AQ8IVW1 177 aa17.87■□□□□ 0.45
NELFB-201ENST00000343053 Q8N1Y9 231 aa17.87■□□□□ 0.45
NELFB-201ENST00000343053 ZNRF2Q8NHG8 242 aa17.86■□□□□ 0.45
NELFB-201ENST00000343053 PPP1R17O96001 155 aa17.86■□□□□ 0.45
NELFB-201ENST00000343053 SAMD13Q5VXD3 122 aa17.86■□□□□ 0.45
NELFB-201ENST00000343053 F8W1H4 67 aa17.85■□□□□ 0.45
NELFB-201ENST00000343053 SYNJ2BPP57105 145 aa17.85■□□□□ 0.45
NELFB-201ENST00000343053 PMVKQ15126 192 aa17.85■□□□□ 0.45
NELFB-201ENST00000343053 DEFB112Q30KQ8 113 aa17.85■□□□□ 0.45
NELFB-201ENST00000343053 FBN2P35556 2912 aa17.85■□□□□ 0.45
NELFB-201ENST00000343053 PRORYQ9H606 182 aa17.85■□□□□ 0.45
NELFB-201ENST00000343053 CLUHP3Q96NS8 147 aa17.85■□□□□ 0.45
NELFB-201ENST00000343053 IGHV4OR15-8A0A075B7B6 117 aa17.84■□□□□ 0.45
NELFB-201ENST00000343053 A0A087WW49 117 aa17.84■□□□□ 0.45
NELFB-201ENST00000343053 A0A1B0GWB2 263 aa17.84■□□□□ 0.45
NELFB-201ENST00000343053 VCYO14598 125 aa17.84■□□□□ 0.45
NELFB-201ENST00000343053 TLN2Q9Y4G6 2542 aa17.84■□□□□ 0.45
NELFB-201ENST00000343053 IGHV3-16A0A0C4DH30 117 aa17.84■□□□□ 0.45
NELFB-201ENST00000343053 PSMB8P28062 276 aa17.84■□□□□ 0.45
NELFB-201ENST00000343053 POM121L12Q8N7R1 296 aa17.84■□□□□ 0.45
NELFB-201ENST00000343053 SPAG8Q99932 426 aaPredicted RBP17.84■□□□□ 0.45
NELFB-201ENST00000343053 LRRK2Q5S007 2527 aa17.83■□□□□ 0.45
NELFB-201ENST00000343053 IGHV3-73A0A0B4J1V6 119 aa17.83■□□□□ 0.44
NELFB-201ENST00000343053 ABCA12Q86UK0 2595 aa17.83■□□□□ 0.44
NELFB-201ENST00000343053 PRM2P04554 102 aa17.83■□□□□ 0.44
NELFB-201ENST00000343053 SMAGPQ0VAQ4 97 aa17.83■□□□□ 0.44
NELFB-201ENST00000343053 PRO0461Q9UI25 63 aa17.82■□□□□ 0.44
NELFB-201ENST00000343053 TRBV7-9A0A0J9YWB2 115 aa17.82■□□□□ 0.44
NELFB-201ENST00000343053 TSPAN13O95857 204 aa17.82■□□□□ 0.44
NELFB-201ENST00000343053 PSMB2P49721 201 aa17.82■□□□□ 0.44
NELFB-201ENST00000343053 A0A0J9YX75 114 aa17.81■□□□□ 0.44
NELFB-201ENST00000343053 A0A0J9YY99 117 aa17.81■□□□□ 0.44
NELFB-201ENST00000343053 HERVK_113P61574 105 aa17.81■□□□□ 0.44
NELFB-201ENST00000343053 ZNF418Q8TF45 676 aaPredicted RBP17.81■□□□□ 0.44
NELFB-201ENST00000343053 LINC01619G3V211 115 aa17.8■□□□□ 0.44
NELFB-201ENST00000343053 AZU1P20160 251 aa17.8■□□□□ 0.44
NELFB-201ENST00000343053 HIST2H2BDQ6DRA6 164 aa17.8■□□□□ 0.44
NELFB-201ENST00000343053 BRI3O95415 125 aa17.8■□□□□ 0.44
NELFB-201ENST00000343053 SNRPD3P62318 126 aaKnown RBP17.79■□□□□ 0.44
NELFB-201ENST00000343053 K7EMT4 169 aa17.79■□□□□ 0.44
NELFB-201ENST00000343053 C9orf85Q96MD7 179 aa17.79■□□□□ 0.44
NELFB-201ENST00000343053 M0QY20 66 aa17.78■□□□□ 0.44
NELFB-201ENST00000343053 NDUFS8O00217 210 aa17.78■□□□□ 0.44
NELFB-201ENST00000343053 ZNF876PQ49A33 203 aa17.78■□□□□ 0.44
NELFB-201ENST00000343053 PTPN13Q12923 2485 aa17.78■□□□□ 0.44
NELFB-201ENST00000343053 TMEM238LA0A1B0GVL6 79 aa17.78■□□□□ 0.44
NELFB-201ENST00000343053 A6NJY4 79 aa17.78■□□□□ 0.44
NELFB-201ENST00000343053 B4DSR2 109 aa17.78■□□□□ 0.44
NELFB-201ENST00000343053 LGALS9O00182 355 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms