RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 KIF25-AS1Q9Y6Z4 181 aa11.37□□□□□ -0.59
MBD1-203ENST00000339998 IGHV3-73A0A0B4J1V6 119 aa11.37□□□□□ -0.59
MBD1-203ENST00000339998 AP1S3Q96PC3 154 aa11.37□□□□□ -0.59
MBD1-203ENST00000339998 CBY3A6NI87 242 aa11.37□□□□□ -0.59
MBD1-203ENST00000339998 HLA-DRB4P13762 266 aa11.37□□□□□ -0.59
MBD1-203ENST00000339998 KRTAP10-3P60369 221 aa11.37□□□□□ -0.59
MBD1-203ENST00000339998 FHL3Q13643 280 aa11.37□□□□□ -0.59
MBD1-203ENST00000339998 ODF3L2Q3SX64 289 aa11.37□□□□□ -0.59
MBD1-203ENST00000339998 NXT2Q9NPJ8 142 aaKnown RBP11.37□□□□□ -0.59
MBD1-203ENST00000339998 HLA-DRB4X5D2U9 266 aa11.37□□□□□ -0.59
MBD1-203ENST00000339998 DUSP14O95147 198 aaKnown RBP11.36□□□□□ -0.59
MBD1-203ENST00000339998 C20orf202A1L168 122 aa11.36□□□□□ -0.59
MBD1-203ENST00000339998 FCER1GP30273 86 aa11.35□□□□□ -0.59
MBD1-203ENST00000339998 XCL2Q9UBD3 114 aa11.35□□□□□ -0.59
MBD1-203ENST00000339998 UQCR10Q9UDW1 63 aa11.35□□□□□ -0.59
MBD1-203ENST00000339998 TSSC4Q9Y5U2 329 aaPredicted RBP11.35□□□□□ -0.59
MBD1-203ENST00000339998 IGHV3OR16-12A0A075B7B8 117 aa11.35□□□□□ -0.59
MBD1-203ENST00000339998 SMIM17P0DL12 118 aa11.35□□□□□ -0.59
MBD1-203ENST00000339998 TSPOP30536 169 aa11.35□□□□□ -0.59
MBD1-203ENST00000339998 SUMO2P61956 95 aaKnown RBP11.35□□□□□ -0.59
MBD1-203ENST00000339998 LAMTOR2Q9Y2Q5 125 aa11.35□□□□□ -0.59
MBD1-203ENST00000339998 SUMO4Q6EEV6 95 aa11.34□□□□□ -0.59
MBD1-203ENST00000339998 SMIM2Q9BVW6 85 aa11.34□□□□□ -0.59
MBD1-203ENST00000339998 M0R143 59 aa11.34□□□□□ -0.59
MBD1-203ENST00000339998 SAP30O75446 220 aa11.34□□□□□ -0.59
MBD1-203ENST00000339998 HNRNPA3P51991 378 aaKnown RBP11.34□□□□□ -0.59
MBD1-203ENST00000339998 PROK1P58294 105 aa11.34□□□□□ -0.59
MBD1-203ENST00000339998 ZNF876PQ49A33 203 aa11.34□□□□□ -0.59
MBD1-203ENST00000339998 ANKRD39Q53RE8 183 aa11.34□□□□□ -0.59
MBD1-203ENST00000339998 C9orf85Q96MD7 179 aa11.34□□□□□ -0.59
MBD1-203ENST00000339998 ODF3Q96PU9 254 aa11.34□□□□□ -0.59
MBD1-203ENST00000339998 GOLT1BQ9Y3E0 138 aa11.34□□□□□ -0.59
MBD1-203ENST00000339998 ADARB2-AS1A8MUL3 147 aa11.34□□□□□ -0.59
MBD1-203ENST00000339998 PRSS1P07477 247 aa11.34□□□□□ -0.59
MBD1-203ENST00000339998 LAGE3Q14657 143 aa11.34□□□□□ -0.59
MBD1-203ENST00000339998 MRAP2Q96G30 205 aa11.34□□□□□ -0.59
MBD1-203ENST00000339998 MED14OSP0DP75 135 aa11.33□□□□□ -0.6
MBD1-203ENST00000339998 NXPH4O95158 308 aa11.33□□□□□ -0.6
MBD1-203ENST00000339998 NUDT3O95989 172 aa11.33□□□□□ -0.6
MBD1-203ENST00000339998 CSTL1Q9H114 145 aa11.33□□□□□ -0.6
MBD1-203ENST00000339998 Q9UF83 564 aa11.33□□□□□ -0.6
MBD1-203ENST00000339998 SPATA3Q8NHX4 192 aa11.32□□□□□ -0.6
MBD1-203ENST00000339998 HINT1P49773 126 aaPredicted RBP11.32□□□□□ -0.6
MBD1-203ENST00000339998 ZNF56Q15929 161 aa11.32□□□□□ -0.6
MBD1-203ENST00000339998 C16orf95Q9H693 158 aa11.32□□□□□ -0.6
MBD1-203ENST00000339998 CRYGDP07320 174 aa11.31□□□□□ -0.6
MBD1-203ENST00000339998 LINC01546A6NGU7 62 aa11.31□□□□□ -0.6
MBD1-203ENST00000339998 P0DMU3 169 aa11.31□□□□□ -0.6
MBD1-203ENST00000339998 FAM231AP0DMU4 169 aa11.31□□□□□ -0.6
MBD1-203ENST00000339998 FAM231CP0DMU5 169 aa11.31□□□□□ -0.6
MBD1-203ENST00000339998 TTTY13Q9BZ97 58 aa11.31□□□□□ -0.6
MBD1-203ENST00000339998 HSBP1L1C9JCN9 74 aa11.3□□□□□ -0.6
MBD1-203ENST00000339998 AZU1P20160 251 aa11.3□□□□□ -0.6
MBD1-203ENST00000339998 Q6ZVH6 145 aa11.3□□□□□ -0.6
MBD1-203ENST00000339998 LINC01587Q99440 93 aa11.3□□□□□ -0.6
MBD1-203ENST00000339998 SPAG8Q99932 426 aaPredicted RBP11.3□□□□□ -0.6
MBD1-203ENST00000339998 ZC2HC1BQ5TFG8 222 aa11.3□□□□□ -0.6
MBD1-203ENST00000339998 MORN3Q6PF18 240 aaPredicted RBP11.3□□□□□ -0.6
MBD1-203ENST00000339998 C2orf88Q9BSF0 95 aa11.3□□□□□ -0.6
MBD1-203ENST00000339998 ODF1Q14990 250 aa11.29□□□□□ -0.6
MBD1-203ENST00000339998 LGALS9BQ3B8N2 356 aa11.28□□□□□ -0.6
MBD1-203ENST00000339998 LGALS9CQ6DKI2 356 aa11.28□□□□□ -0.6
MBD1-203ENST00000339998 PRSS47A8MTI9 375 aa11.28□□□□□ -0.6
MBD1-203ENST00000339998 RPL39P62891 51 aaKnown RBP11.28□□□□□ -0.6
MBD1-203ENST00000339998 STHQ8IWL8 128 aa11.28□□□□□ -0.6
MBD1-203ENST00000339998 ST20Q9HBF5 79 aa11.28□□□□□ -0.6
MBD1-203ENST00000339998 OR11H12B2RN74 326 aa11.27□□□□□ -0.61
MBD1-203ENST00000339998 MRPL35Q9NZE8 188 aaKnown RBP11.27□□□□□ -0.61
MBD1-203ENST00000339998 SDHAF1A6NFY7 115 aa11.27□□□□□ -0.61
MBD1-203ENST00000339998 PCP2Q8IVA1 136 aa11.27□□□□□ -0.61
MBD1-203ENST00000339998 TMEM160Q9NX00 188 aa11.27□□□□□ -0.61
MBD1-203ENST00000339998 MRPL16Q9NX20 251 aaKnown RBP11.27□□□□□ -0.61
MBD1-203ENST00000339998 RPL35AP18077 110 aaKnown RBP11.26□□□□□ -0.61
MBD1-203ENST00000339998 TMEM208Q9BTX3 173 aa11.26□□□□□ -0.61
MBD1-203ENST00000339998 IGKV2D-26A0A0A0MRZ7 120 aa11.26□□□□□ -0.61
MBD1-203ENST00000339998 A8MTW9 85 aa11.26□□□□□ -0.61
MBD1-203ENST00000339998 M0QY20 66 aa11.26□□□□□ -0.61
MBD1-203ENST00000339998 NMUP48645 174 aa11.26□□□□□ -0.61
MBD1-203ENST00000339998 C2orf66Q6UXQ4 117 aa11.26□□□□□ -0.61
MBD1-203ENST00000339998 Q6ZSN1 163 aa11.26□□□□□ -0.61
MBD1-203ENST00000339998 DEFB125Q8N687 156 aa11.26□□□□□ -0.61
MBD1-203ENST00000339998 C20orf78Q9BR46 151 aa11.26□□□□□ -0.61
MBD1-203ENST00000339998 SLC25A34Q6PIV7 304 aa11.25□□□□□ -0.61
MBD1-203ENST00000339998 SYT8Q8NBV8 401 aa11.25□□□□□ -0.61
MBD1-203ENST00000339998 TRGV11A0A075B6L2 103 aa11.25□□□□□ -0.61
MBD1-203ENST00000339998 MPV17L2Q567V2 206 aa11.25□□□□□ -0.61
MBD1-203ENST00000339998 GTSCR1Q86UQ5 136 aa11.25□□□□□ -0.61
MBD1-203ENST00000339998 POM121L12Q8N7R1 296 aa11.25□□□□□ -0.61
MBD1-203ENST00000339998 SCGB3A1Q96QR1 104 aa11.25□□□□□ -0.61
MBD1-203ENST00000339998 TRAV2A0A0B4J234 112 aa11.25□□□□□ -0.61
MBD1-203ENST00000339998 EMP1P54849 157 aa11.25□□□□□ -0.61
MBD1-203ENST00000339998 C1orf158Q8N1D5 194 aa11.25□□□□□ -0.61
MBD1-203ENST00000339998 POLR2KP53803 58 aaKnown RBP11.24□□□□□ -0.61
MBD1-203ENST00000339998 SCGB2A2Q13296 93 aa11.24□□□□□ -0.61
MBD1-203ENST00000339998 HHLA3Q9XRX5 114 aa11.24□□□□□ -0.61
MBD1-203ENST00000339998 NUTF2P61970 127 aaKnown RBP11.23□□□□□ -0.61
MBD1-203ENST00000339998 G0S2P27469 103 aa11.23□□□□□ -0.61
MBD1-203ENST00000339998 C11orf72Q8NBR9 251 aa11.23□□□□□ -0.61
MBD1-203ENST00000339998 OPRPNQ99935 248 aaPredicted RBP11.23□□□□□ -0.61
MBD1-203ENST00000339998 INSP01308 110 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms