RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 SS18L2Q9UHA2 77 aa12.27□□□□□ -0.44
UPK3B-202ENST00000334348 RHODO00212 210 aa12.27□□□□□ -0.45
UPK3B-202ENST00000334348 USP9XQ93008 2570 aaPredicted RBP12.26□□□□□ -0.45
UPK3B-202ENST00000334348 IGHV4OR15-8A0A075B7B6 117 aa12.26□□□□□ -0.45
UPK3B-202ENST00000334348 A0A087WW49 117 aa12.26□□□□□ -0.45
UPK3B-202ENST00000334348 LY6HO94772 140 aa12.26□□□□□ -0.45
UPK3B-202ENST00000334348 NHLRC4P0CG21 123 aaPredicted RBP12.26□□□□□ -0.45
UPK3B-202ENST00000334348 TIMM17AQ99595 171 aa12.26□□□□□ -0.45
UPK3B-202ENST00000334348 HIVEP3Q5T1R4 2406 aa12.26□□□□□ -0.45
UPK3B-202ENST00000334348 HELZ2Q9BYK8 2649 aaKnown RBP12.26□□□□□ -0.45
UPK3B-202ENST00000334348 FAM90A27PA6NNH2 459 aa12.26□□□□□ -0.45
UPK3B-202ENST00000334348 C9JAW5 83 aa12.26□□□□□ -0.45
UPK3B-202ENST00000334348 TMEM170BQ5T4T1 132 aa12.26□□□□□ -0.45
UPK3B-202ENST00000334348 CRYBG3Q68DQ2 2970 aa12.26□□□□□ -0.45
UPK3B-202ENST00000334348 OR10J6PQ8NGY7 276 aa12.26□□□□□ -0.45
UPK3B-202ENST00000334348 UBR5O95071 2799 aaPredicted RBP12.25□□□□□ -0.45
UPK3B-202ENST00000334348 J3QQQ9 107 aa12.25□□□□□ -0.45
UPK3B-202ENST00000334348 OVOL1O14753 267 aa12.25□□□□□ -0.45
UPK3B-202ENST00000334348 POLR2KP53803 58 aaKnown RBP12.25□□□□□ -0.45
UPK3B-202ENST00000334348 GCN1Q92616 2671 aaKnown RBP12.25□□□□□ -0.45
UPK3B-202ENST00000334348 IGHV3-33P01772 117 aa12.25□□□□□ -0.45
UPK3B-202ENST00000334348 RNASE3P12724 160 aaKnown RBP12.25□□□□□ -0.45
UPK3B-202ENST00000334348 LINC00315P59091 139 aa12.25□□□□□ -0.45
UPK3B-202ENST00000334348 ZNF876PQ49A33 203 aa12.25□□□□□ -0.45
UPK3B-202ENST00000334348 ZNRF2Q8NHG8 242 aa12.25□□□□□ -0.45
UPK3B-202ENST00000334348 KIF25-AS1Q9Y6Z4 181 aa12.25□□□□□ -0.45
UPK3B-202ENST00000334348 ARHGAP32A7KAX9 2087 aa12.24□□□□□ -0.45
UPK3B-202ENST00000334348 A4D1N5 150 aa12.24□□□□□ -0.45
UPK3B-202ENST00000334348 GNRH2O43555 120 aa12.24□□□□□ -0.45
UPK3B-202ENST00000334348 NXPH4O95158 308 aa12.24□□□□□ -0.45
UPK3B-202ENST00000334348 P0DMU3 169 aa12.24□□□□□ -0.45
UPK3B-202ENST00000334348 FAM231AP0DMU4 169 aa12.24□□□□□ -0.45
UPK3B-202ENST00000334348 FAM231CP0DMU5 169 aa12.24□□□□□ -0.45
UPK3B-202ENST00000334348 CRIP2P52943 208 aaPredicted RBP12.24□□□□□ -0.45
UPK3B-202ENST00000334348 GAGE2BQ13066 116 aa12.24□□□□□ -0.45
UPK3B-202ENST00000334348 GAGE2EQ4V326 116 aa12.24□□□□□ -0.45
UPK3B-202ENST00000334348 LINC01560Q8TB33 94 aa12.24□□□□□ -0.45
UPK3B-202ENST00000334348 RAX2Q96IS3 184 aa12.24□□□□□ -0.45
UPK3B-202ENST00000334348 GAGE2DQ9UEU5 116 aa12.24□□□□□ -0.45
UPK3B-202ENST00000334348 SPTAN1Q13813 2472 aaKnown RBP12.23□□□□□ -0.45
UPK3B-202ENST00000334348 G3V318 75 aa12.23□□□□□ -0.45
UPK3B-202ENST00000334348 LGALS3P17931 250 aaKnown RBP12.23□□□□□ -0.45
UPK3B-202ENST00000334348 ZNF843Q8N446 348 aa12.23□□□□□ -0.45
UPK3B-202ENST00000334348 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
UPK3B-202ENST00000334348 FAM19A4Q96LR4 140 aa12.23□□□□□ -0.45
UPK3B-202ENST00000334348 DCHS2Q6V1P9 2916 aa12.23□□□□□ -0.45
UPK3B-202ENST00000334348 WNK2Q9Y3S1 2297 aa12.23□□□□□ -0.45
UPK3B-202ENST00000334348 VCYO14598 125 aa12.23□□□□□ -0.45
UPK3B-202ENST00000334348 RPL39P62891 51 aaKnown RBP12.23□□□□□ -0.45
UPK3B-202ENST00000334348 TRPT1Q86TN4 253 aaKnown RBP12.23□□□□□ -0.45
UPK3B-202ENST00000334348 A0A0B4J2C4 111 aa12.22□□□□□ -0.45
UPK3B-202ENST00000334348 B5MCH6 92 aa12.22□□□□□ -0.45
UPK3B-202ENST00000334348 EIF4EBP3O60516 100 aaPredicted RBP12.22□□□□□ -0.45
UPK3B-202ENST00000334348 SNCGO76070 127 aa12.22□□□□□ -0.45
UPK3B-202ENST00000334348 APRG1Q8IVJ8 170 aa12.22□□□□□ -0.45
UPK3B-202ENST00000334348 LINC01600Q96MT4 127 aa12.22□□□□□ -0.45
UPK3B-202ENST00000334348 LRRK2Q5S007 2527 aa12.22□□□□□ -0.45
UPK3B-202ENST00000334348 RNASE4P34096 147 aaKnown RBP12.22□□□□□ -0.45
UPK3B-202ENST00000334348 NDUFV3P56181 108 aaKnown RBP12.22□□□□□ -0.45
UPK3B-202ENST00000334348 TACC2O95359 2948 aa12.22□□□□□ -0.45
UPK3B-202ENST00000334348 ARL3P36405 182 aa12.21□□□□□ -0.45
UPK3B-202ENST00000334348 SPTBN1Q01082 2364 aaKnown RBP12.21□□□□□ -0.46
UPK3B-202ENST00000334348 NBPF19A0A087WUL8 3843 aa12.21□□□□□ -0.46
UPK3B-202ENST00000334348 SOCS3O14543 225 aa12.21□□□□□ -0.46
UPK3B-202ENST00000334348 Q6Q795 121 aa12.21□□□□□ -0.46
UPK3B-202ENST00000334348 Q8N1Y9 231 aa12.21□□□□□ -0.46
UPK3B-202ENST00000334348 CENPEQ02224 2701 aa12.2□□□□□ -0.46
UPK3B-202ENST00000334348 TRAV4A0A0B4J268 109 aa12.2□□□□□ -0.46
UPK3B-202ENST00000334348 LEPROTO15243 131 aa12.2□□□□□ -0.46
UPK3B-202ENST00000334348 ATXN8Q156A1 80 aa12.2□□□□□ -0.46
UPK3B-202ENST00000334348 NTN5Q8WTR8 489 aaPredicted RBP12.2□□□□□ -0.46
UPK3B-202ENST00000334348 TRBV7-9A0A0J9YWB2 115 aa12.19□□□□□ -0.46
UPK3B-202ENST00000334348 SUMO4Q6EEV6 95 aa12.19□□□□□ -0.46
UPK3B-202ENST00000334348 FASNP49327 2511 aaKnown RBP12.19□□□□□ -0.46
UPK3B-202ENST00000334348 LRBAP50851 2863 aa12.19□□□□□ -0.46
UPK3B-202ENST00000334348 CSMD1Q96PZ7 3565 aa12.19□□□□□ -0.46
UPK3B-202ENST00000334348 CRLF1O75462 422 aa12.19□□□□□ -0.46
UPK3B-202ENST00000334348 RPL13AP40429 203 aaKnown RBP12.19□□□□□ -0.46
UPK3B-202ENST00000334348 LINC01620Q4KN68 170 aa12.19□□□□□ -0.46
UPK3B-202ENST00000334348 SIRPDQ9H106 197 aa12.19□□□□□ -0.46
UPK3B-202ENST00000334348 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.18□□□□□ -0.46
UPK3B-202ENST00000334348 TRBV27A0A0K0K1C4 114 aa12.18□□□□□ -0.46
UPK3B-202ENST00000334348 TMEM223A0PJW6 202 aa12.18□□□□□ -0.46
UPK3B-202ENST00000334348 GAGE12JA6NER3 117 aa12.18□□□□□ -0.46
UPK3B-202ENST00000334348 GAGE7O76087 117 aa12.18□□□□□ -0.46
UPK3B-202ENST00000334348 GAGE12FP0CL80 117 aa12.18□□□□□ -0.46
UPK3B-202ENST00000334348 GAGE12GP0CL81 117 aa12.18□□□□□ -0.46
UPK3B-202ENST00000334348 GAGE12IP0CL82 117 aa12.18□□□□□ -0.46
UPK3B-202ENST00000334348 IFITM1P13164 125 aa12.18□□□□□ -0.46
UPK3B-202ENST00000334348 DEFB1P60022 68 aa12.18□□□□□ -0.46
UPK3B-202ENST00000334348 GAGE4Q13068 117 aa12.18□□□□□ -0.46
UPK3B-202ENST00000334348 MUSTN1Q8IVN3 82 aa12.18□□□□□ -0.46
UPK3B-202ENST00000334348 DEFB104AQ8WTQ1 72 aa12.18□□□□□ -0.46
UPK3B-202ENST00000334348 SDHAF1A6NFY7 115 aa12.18□□□□□ -0.46
UPK3B-202ENST00000334348 ZFP36P26651 326 aaKnown RBP12.18□□□□□ -0.46
UPK3B-202ENST00000334348 TTC32Q5I0X7 151 aa12.18□□□□□ -0.46
UPK3B-202ENST00000334348 TRAV2A0A0B4J234 112 aa12.17□□□□□ -0.46
UPK3B-202ENST00000334348 H7C2G1 150 aa12.17□□□□□ -0.46
UPK3B-202ENST00000334348 GNLYP22749 145 aa12.17□□□□□ -0.46
UPK3B-202ENST00000334348 TRBV6-5A0A0K0K1A5 114 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms