RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 RNF212Q495C1 297 aa11.2□□□□□ -0.62
LRRC28-202ENST00000331450 C15orf53Q8NAA6 179 aa11.2□□□□□ -0.62
LRRC28-202ENST00000331450 AP1S3Q96PC3 154 aa11.2□□□□□ -0.62
LRRC28-202ENST00000331450 KIF25-AS1Q9Y6Z4 181 aa11.2□□□□□ -0.62
LRRC28-202ENST00000331450 DYNC2H1Q8NCM8 4307 aaKnown RBP11.2□□□□□ -0.62
LRRC28-202ENST00000331450 A0A087WWL8 130 aa11.19□□□□□ -0.62
LRRC28-202ENST00000331450 IGHV3-73A0A0B4J1V6 119 aa11.19□□□□□ -0.62
LRRC28-202ENST00000331450 A0A0J9YY99 117 aa11.19□□□□□ -0.62
LRRC28-202ENST00000331450 PPP1R2P9O14990 202 aa11.19□□□□□ -0.62
LRRC28-202ENST00000331450 NTF3P20783 257 aa11.19□□□□□ -0.62
LRRC28-202ENST00000331450 PGLYRP4Q96LB8 373 aa11.19□□□□□ -0.62
LRRC28-202ENST00000331450 TRBV6-4A0A1B0GX49 114 aa11.18□□□□□ -0.62
LRRC28-202ENST00000331450 SSTP61278 116 aa11.18□□□□□ -0.62
LRRC28-202ENST00000331450 FAM74A4Q5TZK3 123 aa11.18□□□□□ -0.62
LRRC28-202ENST00000331450 Q6ZSN1 163 aa11.18□□□□□ -0.62
LRRC28-202ENST00000331450 NUP35Q8NFH5 326 aa11.18□□□□□ -0.62
LRRC28-202ENST00000331450 ANAPC16Q96DE5 110 aa11.18□□□□□ -0.62
LRRC28-202ENST00000331450 PAX4O43316 350 aa11.17□□□□□ -0.62
LRRC28-202ENST00000331450 MT-ND4LP03901 98 aa11.17□□□□□ -0.62
LRRC28-202ENST00000331450 TRGC1P0CF51 173 aa11.17□□□□□ -0.62
LRRC28-202ENST00000331450 LINC00315P59091 139 aa11.17□□□□□ -0.62
LRRC28-202ENST00000331450 C14orf178Q8N769 122 aaPredicted RBP11.17□□□□□ -0.62
LRRC28-202ENST00000331450 SLC25A29Q8N8R3 303 aa11.17□□□□□ -0.62
LRRC28-202ENST00000331450 NAT8BQ9UHF3 227 aa11.17□□□□□ -0.62
LRRC28-202ENST00000331450 A0A1B0GUT8 65 aa11.16□□□□□ -0.62
LRRC28-202ENST00000331450 SLC7A5P1Q8MH63 180 aa11.16□□□□□ -0.62
LRRC28-202ENST00000331450 A0A096LPF7 62 aa11.15□□□□□ -0.62
LRRC28-202ENST00000331450 EVI2AP22794 236 aa11.15□□□□□ -0.62
LRRC28-202ENST00000331450 RHOHQ15669 191 aa11.15□□□□□ -0.62
LRRC28-202ENST00000331450 TWIST1Q15672 202 aa11.15□□□□□ -0.62
LRRC28-202ENST00000331450 LOC100131303A0A0U1RQF7 123 aa11.14□□□□□ -0.63
LRRC28-202ENST00000331450 K7EQD1 137 aa11.14□□□□□ -0.63
LRRC28-202ENST00000331450 NUDT3O95989 172 aa11.14□□□□□ -0.63
LRRC28-202ENST00000331450 GYPEP15421 78 aa11.14□□□□□ -0.63
LRRC28-202ENST00000331450 RAB4BP61018 213 aa11.14□□□□□ -0.63
LRRC28-202ENST00000331450 BORCS7Q96B45 105 aa11.14□□□□□ -0.63
LRRC28-202ENST00000331450 DPH3P1Q9H4G8 78 aa11.14□□□□□ -0.63
LRRC28-202ENST00000331450 ICOSQ9Y6W8 199 aa11.14□□□□□ -0.63
LRRC28-202ENST00000331450 SMIM17P0DL12 118 aa11.13□□□□□ -0.63
LRRC28-202ENST00000331450 LINC00694P0DN24 101 aa11.13□□□□□ -0.63
LRRC28-202ENST00000331450 ZNF56Q15929 161 aa11.13□□□□□ -0.63
LRRC28-202ENST00000331450 NDUFA5Q16718 116 aa11.13□□□□□ -0.63
LRRC28-202ENST00000331450 CLRN3Q8NCR9 226 aa11.13□□□□□ -0.63
LRRC28-202ENST00000331450 LINC00476Q8WZB0 136 aa11.13□□□□□ -0.63
LRRC28-202ENST00000331450 CTDSP1Q9GZU7 261 aa11.13□□□□□ -0.63
LRRC28-202ENST00000331450 PLECQ15149 4684 aaKnown RBP11.12□□□□□ -0.63
LRRC28-202ENST00000331450 RHEBQ15382 184 aa11.12□□□□□ -0.63
LRRC28-202ENST00000331450 MRPL23Q16540 153 aaKnown RBP11.12□□□□□ -0.63
LRRC28-202ENST00000331450 LGALS9CQ6DKI2 356 aa11.12□□□□□ -0.63
LRRC28-202ENST00000331450 PRADC1Q9BSG0 188 aa11.12□□□□□ -0.63
LRRC28-202ENST00000331450 Q9UF83 564 aa11.12□□□□□ -0.63
LRRC28-202ENST00000331450 A0A087WWC5 75 aa11.11□□□□□ -0.63
LRRC28-202ENST00000331450 A0A1B0GXF2 115 aa11.11□□□□□ -0.63
LRRC28-202ENST00000331450 C7orf77A4D0Y5 90 aa11.11□□□□□ -0.63
LRRC28-202ENST00000331450 APOC3P02656 99 aa11.11□□□□□ -0.63
LRRC28-202ENST00000331450 RIGQ13278 110 aa11.11□□□□□ -0.63
LRRC28-202ENST00000331450 TRBV10-1A0A0K0K1A3 114 aa11.1□□□□□ -0.63
LRRC28-202ENST00000331450 LCE6AA0A183 80 aa11.1□□□□□ -0.63
LRRC28-202ENST00000331450 MGPP08493 103 aa11.1□□□□□ -0.63
LRRC28-202ENST00000331450 P0DMU3 169 aa11.1□□□□□ -0.63
LRRC28-202ENST00000331450 FAM231AP0DMU4 169 aa11.1□□□□□ -0.63
LRRC28-202ENST00000331450 FAM231CP0DMU5 169 aa11.1□□□□□ -0.63
LRRC28-202ENST00000331450 IMMP2LQ96T52 175 aa11.1□□□□□ -0.63
LRRC28-202ENST00000331450 TMEM191AQ9H0A3 160 aa11.1□□□□□ -0.63
LRRC28-202ENST00000331450 TMEM242Q9NWH2 141 aa11.1□□□□□ -0.63
LRRC28-202ENST00000331450 A0A1B0GW15 77 aa11.09□□□□□ -0.63
LRRC28-202ENST00000331450 F5H697 171 aa11.09□□□□□ -0.63
LRRC28-202ENST00000331450 SRIP30626 198 aa11.09□□□□□ -0.63
LRRC28-202ENST00000331450 FAM3BP58499 235 aaPredicted RBP11.09□□□□□ -0.63
LRRC28-202ENST00000331450 SUMO4Q6EEV6 95 aa11.09□□□□□ -0.63
LRRC28-202ENST00000331450 SMIM15Q7Z3B0 74 aa11.09□□□□□ -0.63
LRRC28-202ENST00000331450 ATP5L2Q7Z4Y8 100 aa11.09□□□□□ -0.63
LRRC28-202ENST00000331450 SVBPQ8N300 66 aa11.09□□□□□ -0.63
LRRC28-202ENST00000331450 GATD1Q8NB37 220 aa11.09□□□□□ -0.63
LRRC28-202ENST00000331450 M0QY20 66 aa11.08□□□□□ -0.64
LRRC28-202ENST00000331450 SNAPINO95295 136 aa11.08□□□□□ -0.64
LRRC28-202ENST00000331450 ESRGQ1W209 222 aa11.08□□□□□ -0.64
LRRC28-202ENST00000331450 MRPL54Q6P161 138 aaKnown RBP11.08□□□□□ -0.64
LRRC28-202ENST00000331450 NEGR1Q7Z3B1 354 aa11.08□□□□□ -0.64
LRRC28-202ENST00000331450 NEXN-AS1Q8NBZ9 246 aa11.08□□□□□ -0.64
LRRC28-202ENST00000331450 GAGE12JA6NER3 117 aa11.07□□□□□ -0.64
LRRC28-202ENST00000331450 HBBP68871 147 aa11.07□□□□□ -0.64
LRRC28-202ENST00000331450 GAGE1Q13065 139 aa11.07□□□□□ -0.64
LRRC28-202ENST00000331450 GAGE4Q13068 117 aa11.07□□□□□ -0.64
LRRC28-202ENST00000331450 GAGE5Q13069 117 aa11.07□□□□□ -0.64
LRRC28-202ENST00000331450 GAGE13Q4V321 117 aa11.07□□□□□ -0.64
LRRC28-202ENST00000331450 SH2D6Q7Z4S9 175 aa11.07□□□□□ -0.64
LRRC28-202ENST00000331450 RNF185Q96GF1 192 aa11.07□□□□□ -0.64
LRRC28-202ENST00000331450 RPS10P5Q9NQ39 176 aa11.07□□□□□ -0.64
LRRC28-202ENST00000331450 LINC00588Q9Y4M8 146 aa11.07□□□□□ -0.64
LRRC28-202ENST00000331450 H7C1H1 209 aa11.06□□□□□ -0.64
LRRC28-202ENST00000331450 FRZBQ92765 325 aa11.06□□□□□ -0.64
LRRC28-202ENST00000331450 TRBV7-3A0A075B6L6 115 aa11.05□□□□□ -0.64
LRRC28-202ENST00000331450 TRAV9-1A0A075B6T8 112 aa11.05□□□□□ -0.64
LRRC28-202ENST00000331450 LY6G6CO95867 125 aa11.05□□□□□ -0.64
LRRC28-202ENST00000331450 S100A8P05109 93 aa11.05□□□□□ -0.64
LRRC28-202ENST00000331450 RAB4AP20338 218 aa11.05□□□□□ -0.64
LRRC28-202ENST00000331450 CAMPP49913 170 aa11.05□□□□□ -0.64
LRRC28-202ENST00000331450 CCL18P55774 89 aa11.05□□□□□ -0.64
LRRC28-202ENST00000331450 TIRAPP58753 221 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms