RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ZNF415Q09FC8 603 aa4.4□□□□□ -1.7
SMG1-201ENST00000330588 TTC32Q5I0X7 151 aa4.4□□□□□ -1.7
SMG1-201ENST00000330588 C5orf17Q8NAS9 161 aa4.4□□□□□ -1.7
SMG1-201ENST00000330588 INO80EQ8NBZ0 244 aaPredicted RBP4.4□□□□□ -1.7
SMG1-201ENST00000330588 OR10G4Q8NGN3 311 aa4.4□□□□□ -1.7
SMG1-201ENST00000330588 OR10G9Q8NGN4 311 aa4.4□□□□□ -1.7
SMG1-201ENST00000330588 OR10G7Q8NGN6 311 aa4.4□□□□□ -1.7
SMG1-201ENST00000330588 ZNRF2Q8NHG8 242 aa4.4□□□□□ -1.7
SMG1-201ENST00000330588 CMTM2Q8TAZ6 248 aa4.4□□□□□ -1.7
SMG1-201ENST00000330588 TMEM167BQ9NRX6 74 aa4.4□□□□□ -1.7
SMG1-201ENST00000330588 STARD9Q9P2P6 4700 aa4.4□□□□□ -1.7
SMG1-201ENST00000330588 NACAE9PAV3 2078 aa4.4□□□□□ -1.71
SMG1-201ENST00000330588 A0A1W2PRE2 83 aa4.4□□□□□ -1.71
SMG1-201ENST00000330588 RNF222A6NCQ9 220 aa4.4□□□□□ -1.71
SMG1-201ENST00000330588 PGPA6NDG6 321 aa4.4□□□□□ -1.71
SMG1-201ENST00000330588 RTL8CO15255 209 aa4.4□□□□□ -1.71
SMG1-201ENST00000330588 CXorf1O96002 111 aa4.4□□□□□ -1.71
SMG1-201ENST00000330588 ORM1P02763 201 aa4.4□□□□□ -1.71
SMG1-201ENST00000330588 PMCHP20382 165 aa4.4□□□□□ -1.71
SMG1-201ENST00000330588 ATP6V0CP27449 155 aa4.4□□□□□ -1.71
SMG1-201ENST00000330588 MRPL23Q16540 153 aaKnown RBP4.4□□□□□ -1.71
SMG1-201ENST00000330588 C1orf134Q5TEV5 83 aa4.4□□□□□ -1.71
SMG1-201ENST00000330588 RASL10AQ92737 203 aa4.4□□□□□ -1.71
SMG1-201ENST00000330588 MRAP2Q96G30 205 aa4.4□□□□□ -1.71
SMG1-201ENST00000330588 KCNS1Q96KK3 526 aa4.4□□□□□ -1.71
SMG1-201ENST00000330588 SMIM3Q9BZL3 60 aa4.4□□□□□ -1.71
SMG1-201ENST00000330588 MRPS16Q9Y3D3 137 aaKnown RBP4.4□□□□□ -1.71
SMG1-201ENST00000330588 DNAH1Q9P2D7 4330 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 TRGV2A0A075B6R0 118 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 TRAV21A0A0B4J279 112 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 NBDYA0A0U1RRE5 68 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 CCL25O15444 150 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 GAGE7O76087 117 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 GAGE12FP0CL80 117 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 GAGE12GP0CL81 117 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 GAGE12IP0CL82 117 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 ARL14EPLP0DKL9 152 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 GCHFRP30047 84 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 PIK3CD-AS1Q5SR53 167 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 COL5A1-AS1Q5SY13 56 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 PRR9Q5T870 116 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 KCNIP4Q6PIL6 250 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 Q6ZTI0 123 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 NDFIP1Q9BT67 221 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 ACTR3CQ9C0K3 210 aaPredicted RBP4.39□□□□□ -1.71
SMG1-201ENST00000330588 CST9LQ9H4G1 147 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 PRO0255Q9UI72 69 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 LINC00588Q9Y4M8 146 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 ARL2-SNX15V9GYD0 113 aa4.39□□□□□ -1.71
SMG1-201ENST00000330588 TRGV1A0A0A0MS02 117 aa4.38□□□□□ -1.71
SMG1-201ENST00000330588 CTXND1A0A1B0GTU2 59 aa4.38□□□□□ -1.71
SMG1-201ENST00000330588 TMEM218A2RU14 115 aa4.38□□□□□ -1.71
SMG1-201ENST00000330588 ZNF345Q14585 488 aa4.38□□□□□ -1.71
SMG1-201ENST00000330588 TMEM241Q24JQ0 296 aa4.38□□□□□ -1.71
SMG1-201ENST00000330588 SH2D6Q7Z4S9 175 aa4.38□□□□□ -1.71
SMG1-201ENST00000330588 NIT1Q86X76 327 aa4.38□□□□□ -1.71
SMG1-201ENST00000330588 SVBPQ8N300 66 aa4.38□□□□□ -1.71
SMG1-201ENST00000330588 SMIM20Q8N5G0 67 aa4.38□□□□□ -1.71
SMG1-201ENST00000330588 C15orf54Q8N8G6 183 aa4.38□□□□□ -1.71
SMG1-201ENST00000330588 TMEM75Q8N9X5 138 aa4.38□□□□□ -1.71
SMG1-201ENST00000330588 Q8TAT8 98 aa4.38□□□□□ -1.71
SMG1-201ENST00000330588 ICOSQ9Y6W8 199 aa4.38□□□□□ -1.71
SMG1-201ENST00000330588 TRAV4A0A0B4J268 109 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 IFNA1P01562 189 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 TCRAP04437 139 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 GAGE5Q13069 117 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 GAGE6Q13070 117 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 OR5I1Q13606 314 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 AKR1C8PQ5T2L2 129 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 UQCC3Q6UW78 93 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 GOLT1AQ6ZVE7 132 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 C6orf223Q8N319 242 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 CYB561D1Q8N8Q1 229 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 OR2T35Q8NGX2 323 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 VSIG2Q96IQ7 327 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 Q9H8V8 135 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 EPDR1Q9UM22 224 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 PSG8Q9UQ74 426 aa4.37□□□□□ -1.71
SMG1-201ENST00000330588 FXYD6-FXYD2A0A087WZ82 144 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 A0A096LPF7 62 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 HMSDA8MTL9 139 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 G3V3Q6 166 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 M0R2P5 195 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 APOC3P02656 99 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 TYMSP04818 313 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 PRB4P10163 310 aaPredicted RBP4.36□□□□□ -1.71
SMG1-201ENST00000330588 ERVFC1-1P60608 527 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 RPL7L1Q6DKI1 246 aaKnown RBP4.36□□□□□ -1.71
SMG1-201ENST00000330588 PRR27Q6MZM9 219 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 COX8CQ7Z4L0 72 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 HIST1H2BAQ96A08 127 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 SDF2L1Q9HCN8 221 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 IGLV2-18A0A075B6J9 118 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 IGHV3-16A0A0C4DH30 117 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 TRBV6-1A0A0K0K1D8 114 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 GGTLC3B5MD39 225 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 UMAD1C9J7I0 102 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 M0R2N4 97 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 PRYO14603 147 aa4.36□□□□□ -1.71
SMG1-201ENST00000330588 IGLV2-11P01706 119 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms