RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 TNFRSF6BO95407 300 aa15□□□□□ -0.01
RIPPLY3-201ENST00000329553 CDKN1BP46527 198 aa15□□□□□ -0.01
RIPPLY3-201ENST00000329553 NDUFA11Q86Y39 141 aa15□□□□□ -0.01
RIPPLY3-201ENST00000329553 BOD1L2Q8IYS8 172 aa15□□□□□ -0.01
RIPPLY3-201ENST00000329553 H3BMM0 161 aa14.99□□□□□ -0.01
RIPPLY3-201ENST00000329553 VAMP3Q15836 100 aa14.99□□□□□ -0.01
RIPPLY3-201ENST00000329553 HLA-DRB4P13762 266 aa14.98□□□□□ -0.01
RIPPLY3-201ENST00000329553 NXT2Q9NPJ8 142 aaKnown RBP14.98□□□□□ -0.01
RIPPLY3-201ENST00000329553 HLA-DRB4X5D2U9 266 aa14.98□□□□□ -0.01
RIPPLY3-201ENST00000329553 SPRY2O43597 315 aa14.98□□□□□ -0.01
RIPPLY3-201ENST00000329553 ASIPP42127 132 aa14.98□□□□□ -0.01
RIPPLY3-201ENST00000329553 F8P00451 2351 aa14.98□□□□□ -0.01
RIPPLY3-201ENST00000329553 IGHV4-4A0A075B6R2 117 aa14.97□□□□□ -0.01
RIPPLY3-201ENST00000329553 K7EP13 123 aa14.97□□□□□ -0.01
RIPPLY3-201ENST00000329553 S100A4P26447 101 aaKnown RBP14.97□□□□□ -0.01
RIPPLY3-201ENST00000329553 FAM159AQ6UWV7 190 aa14.97□□□□□ -0.01
RIPPLY3-201ENST00000329553 A8MTW9 85 aa14.97□□□□□ -0.01
RIPPLY3-201ENST00000329553 SAP30O75446 220 aa14.97□□□□□ -0.01
RIPPLY3-201ENST00000329553 FCER1GP30273 86 aa14.97□□□□□ -0.01
RIPPLY3-201ENST00000329553 TMEM97Q5BJF2 176 aa14.97□□□□□ -0.01
RIPPLY3-201ENST00000329553 SPANXN1Q5VSR9 72 aa14.97□□□□□ -0.01
RIPPLY3-201ENST00000329553 SEC11AP67812 179 aa14.96□□□□□ -0.01
RIPPLY3-201ENST00000329553 RBMY1BA6NDE4 496 aaKnown RBP14.96□□□□□ -0.02
RIPPLY3-201ENST00000329553 RBMY1EA6NEQ0 496 aaKnown RBP14.96□□□□□ -0.02
RIPPLY3-201ENST00000329553 RBMY1DP0C7P1 496 aaKnown RBP14.96□□□□□ -0.02
RIPPLY3-201ENST00000329553 RNASE3P12724 160 aaKnown RBP14.96□□□□□ -0.02
RIPPLY3-201ENST00000329553 ERASQ7Z444 233 aa14.96□□□□□ -0.02
RIPPLY3-201ENST00000329553 OR4C5Q8NGB2 326 aa14.96□□□□□ -0.02
RIPPLY3-201ENST00000329553 GATA1P15976 413 aaPredicted RBP14.95□□□□□ -0.02
RIPPLY3-201ENST00000329553 EVI2AP22794 236 aa14.95□□□□□ -0.02
RIPPLY3-201ENST00000329553 ODF3L2Q3SX64 289 aa14.95□□□□□ -0.02
RIPPLY3-201ENST00000329553 DKK2Q9UBU2 259 aa14.95□□□□□ -0.02
RIPPLY3-201ENST00000329553 IGLV2-18A0A075B6J9 118 aa14.94□□□□□ -0.02
RIPPLY3-201ENST00000329553 SIVA1O15304 175 aa14.94□□□□□ -0.02
RIPPLY3-201ENST00000329553 CBY1Q9Y3M2 126 aa14.94□□□□□ -0.02
RIPPLY3-201ENST00000329553 CBY3A6NI87 242 aa14.94□□□□□ -0.02
RIPPLY3-201ENST00000329553 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.94□□□□□ -0.02
RIPPLY3-201ENST00000329553 PRSS47A8MTI9 375 aa14.93□□□□□ -0.02
RIPPLY3-201ENST00000329553 MED14OSP0DP75 135 aa14.93□□□□□ -0.02
RIPPLY3-201ENST00000329553 Q8N8P6 123 aa14.93□□□□□ -0.02
RIPPLY3-201ENST00000329553 RNASE8Q8TDE3 154 aaKnown RBP14.93□□□□□ -0.02
RIPPLY3-201ENST00000329553 C18orf15Q96N68 181 aa14.93□□□□□ -0.02
RIPPLY3-201ENST00000329553 ZMAT4Q9H898 229 aa14.93□□□□□ -0.02
RIPPLY3-201ENST00000329553 CD7P09564 240 aa14.93□□□□□ -0.02
RIPPLY3-201ENST00000329553 PHLDA3Q9Y5J5 127 aa14.93□□□□□ -0.02
RIPPLY3-201ENST00000329553 M0R381 172 aa14.92□□□□□ -0.02
RIPPLY3-201ENST00000329553 IGLV1-51P01701 117 aa14.92□□□□□ -0.02
RIPPLY3-201ENST00000329553 ODF1Q14990 250 aa14.92□□□□□ -0.02
RIPPLY3-201ENST00000329553 OR2K2Q8NGT1 345 aa14.92□□□□□ -0.02
RIPPLY3-201ENST00000329553 NIPBLQ6KC79 2804 aaeCLIP14.92□□□□□ -0.02
RIPPLY3-201ENST00000329553 AMMECR1LQ6DCA0 310 aa14.91□□□□□ -0.02
RIPPLY3-201ENST00000329553 NRACQ8N912 160 aa14.91□□□□□ -0.02
RIPPLY3-201ENST00000329553 PF4P02776 101 aa14.9□□□□□ -0.02
RIPPLY3-201ENST00000329553 RBMY1A1P0DJD3 496 aaKnown RBP14.9□□□□□ -0.02
RIPPLY3-201ENST00000329553 RBMY1CP0DJD4 496 aa14.9□□□□□ -0.02
RIPPLY3-201ENST00000329553 RBMY1FQ15415 496 aaKnown RBP14.9□□□□□ -0.02
RIPPLY3-201ENST00000329553 SMIM15Q7Z3B0 74 aa14.9□□□□□ -0.02
RIPPLY3-201ENST00000329553 MUC4Q99102 2169 aa14.9□□□□□ -0.02
RIPPLY3-201ENST00000329553 IGHV1OR15-1A0A075B7D0 117 aa14.9□□□□□ -0.02
RIPPLY3-201ENST00000329553 TRAV8-6A0A0B4J262 113 aa14.9□□□□□ -0.02
RIPPLY3-201ENST00000329553 TCTAP57738 103 aa14.9□□□□□ -0.02
RIPPLY3-201ENST00000329553 PCP2Q8IVA1 136 aa14.9□□□□□ -0.02
RIPPLY3-201ENST00000329553 TMEM158Q8WZ71 300 aa14.9□□□□□ -0.02
RIPPLY3-201ENST00000329553 HHLA3Q9XRX5 114 aa14.9□□□□□ -0.02
RIPPLY3-201ENST00000329553 HSD52Q0P140 79 aa14.89□□□□□ -0.03
RIPPLY3-201ENST00000329553 Q8N1Y9 231 aa14.89□□□□□ -0.03
RIPPLY3-201ENST00000329553 LINC00482Q8N8I6 264 aa14.89□□□□□ -0.03
RIPPLY3-201ENST00000329553 CYSRT1A8MQ03 144 aa14.89□□□□□ -0.03
RIPPLY3-201ENST00000329553 OR11H12B2RN74 326 aa14.89□□□□□ -0.03
RIPPLY3-201ENST00000329553 MDFICQ9P1T7 246 aa14.89□□□□□ -0.03
RIPPLY3-201ENST00000329553 IGHV3-16A0A0C4DH30 117 aa14.88□□□□□ -0.03
RIPPLY3-201ENST00000329553 NMUP48645 174 aa14.88□□□□□ -0.03
RIPPLY3-201ENST00000329553 RBX1P62877 108 aa14.88□□□□□ -0.03
RIPPLY3-201ENST00000329553 BAHCC1Q9P281 2608 aa14.87□□□□□ -0.03
RIPPLY3-201ENST00000329553 PRSS1P07477 247 aa14.87□□□□□ -0.03
RIPPLY3-201ENST00000329553 TRAV26-2A0A0B4J265 109 aa14.86□□□□□ -0.03
RIPPLY3-201ENST00000329553 A6NDN8 102 aa14.86□□□□□ -0.03
RIPPLY3-201ENST00000329553 ATP5LO75964 103 aa14.86□□□□□ -0.03
RIPPLY3-201ENST00000329553 H3BRM9 83 aa14.86□□□□□ -0.03
RIPPLY3-201ENST00000329553 SMIM17P0DL12 118 aa14.86□□□□□ -0.03
RIPPLY3-201ENST00000329553 STHQ8IWL8 128 aa14.86□□□□□ -0.03
RIPPLY3-201ENST00000329553 CLUHP3Q96NS8 147 aa14.86□□□□□ -0.03
RIPPLY3-201ENST00000329553 NXPH4O95158 308 aa14.85□□□□□ -0.03
RIPPLY3-201ENST00000329553 IGKCP01834 107 aa14.85□□□□□ -0.03
RIPPLY3-201ENST00000329553 LAGE3Q14657 143 aa14.85□□□□□ -0.03
RIPPLY3-201ENST00000329553 C14orf178Q8N769 122 aaPredicted RBP14.85□□□□□ -0.03
RIPPLY3-201ENST00000329553 C9orf85Q96MD7 179 aa14.85□□□□□ -0.03
RIPPLY3-201ENST00000329553 JMJD1CQ15652 2540 aa14.85□□□□□ -0.03
RIPPLY3-201ENST00000329553 BEAN1Q3B7T3 259 aa14.85□□□□□ -0.03
RIPPLY3-201ENST00000329553 CITED1Q99966 193 aa14.85□□□□□ -0.03
RIPPLY3-201ENST00000329553 IGKV2D-26A0A0A0MRZ7 120 aa14.84□□□□□ -0.03
RIPPLY3-201ENST00000329553 MRAP2Q96G30 205 aa14.84□□□□□ -0.03
RIPPLY3-201ENST00000329553 C9orf118A6NHY6 69 aa14.84□□□□□ -0.03
RIPPLY3-201ENST00000329553 HTN1P15515 57 aa14.83□□□□□ -0.04
RIPPLY3-201ENST00000329553 CMC4P56277 68 aaPredicted RBP14.83□□□□□ -0.04
RIPPLY3-201ENST00000329553 TRPT1Q86TN4 253 aaKnown RBP14.83□□□□□ -0.04
RIPPLY3-201ENST00000329553 SPATA3Q8NHX4 192 aa14.83□□□□□ -0.04
RIPPLY3-201ENST00000329553 DPH3P1Q9H4G8 78 aa14.83□□□□□ -0.04
RIPPLY3-201ENST00000329553 DPM2O94777 84 aa14.82□□□□□ -0.04
RIPPLY3-201ENST00000329553 PRM2P04554 102 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms