RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 METTL26Q96S19 204 aa2.65□□□□□ -1.99
SMCO3-201ENST00000316048 GNB1LQ9BYB4 327 aa2.65□□□□□ -1.99
SMCO3-201ENST00000316048 VPREB3Q9UKI3 123 aa2.65□□□□□ -1.99
SMCO3-201ENST00000316048 PKD1L2Q7Z442 2459 aa2.65□□□□□ -1.99
SMCO3-201ENST00000316048 SMIM27A0A1W2PRY6 76 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 IZUMO1RA6ND01 250 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 A8MWL6 223 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 KLLNB2CW77 178 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 J3QKU1 62 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 K7EP13 123 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 P01737 135 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 MT-ND6P03923 174 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 TPPP2P59282 170 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 BLCAPP62952 87 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 DEFB112Q30KQ8 113 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 RASL11AQ6T310 242 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 GOLT1AQ6ZVE7 132 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 PRNTQ86SH4 94 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 TMEM75Q8N9X5 138 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 CHAC1Q9BUX1 264 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 ZNF492Q9P255 531 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 NAT8BQ9UHF3 227 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 LINC00527Q9UJ94 153 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 CACNA1BQ00975 2339 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 TPRP12270 2363 aaKnown RBP2.64□□□□□ -1.99
SMCO3-201ENST00000316048 SPTBN1Q01082 2364 aaKnown RBP2.64□□□□□ -1.99
SMCO3-201ENST00000316048 ADGRG4Q8IZF6 3080 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 PLXNB1O43157 2135 aa2.64□□□□□ -1.99
SMCO3-201ENST00000316048 A0A096LNT2 108 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 OR11H12B2RN74 326 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 HSBP1O75506 76 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 HLA-DQA1P01909 254 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 SMIM6P0DI80 62 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 SLC35B1P78383 322 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 C11orf72Q8NBR9 251 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 OR11H1Q8NG94 326 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 OR4B1Q8NGF8 309 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 OR11H2Q8NH07 326 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 TSKUQ8WUA8 353 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 SLC50A1Q9BRV3 221 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 RPP21Q9H633 154 aaKnown RBP2.63□□□□□ -1.99
SMCO3-201ENST00000316048 SOX21Q9Y651 276 aaPredicted RBP2.63□□□□□ -1.99
SMCO3-201ENST00000316048 KALRNO60229 2985 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 ITPR1Q14643 2758 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 IGHV3OR16-8A0A075B7F1 116 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 SMIM9A6NGZ8 99 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 NDUFA4O00483 81 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 SPINK4O60575 86 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 SCGB1A1P11684 91 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 TCL1AP56279 114 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 PRR3P79522 188 aaKnown RBP2.63□□□□□ -1.99
SMCO3-201ENST00000316048 ATP5L2Q7Z4Y8 100 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 Q86TA4 180 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 KRTAP11-1Q8IUC1 163 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 OR4X2Q8NGF9 303 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 NDFIP1Q9BT67 221 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 CELA1Q9UNI1 258 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 ZZEF1O43149 2961 aa2.63□□□□□ -1.99
SMCO3-201ENST00000316048 NBEAQ8NFP9 2946 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 TRAV8-1A0A0A6YYK1 113 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 A0A1B0GVY2 172 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 C19orf71A6NCJ1 209 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 HIGD1CA8MV81 97 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 M0R3E3 92 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 CBLN1P23435 193 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 CACNG7P62955 275 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 MRPL54Q6P161 138 aaKnown RBP2.62□□□□□ -1.99
SMCO3-201ENST00000316048 FAM19A1Q7Z5A9 133 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 HIST3H2BBQ8N257 126 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 SMIM20Q8N5G0 67 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 NUP35Q8NFH5 326 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 BORCS7Q96B45 105 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 NAV3Q8IVL0 2385 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 RELNP78509 3460 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 SMG1Q96Q15 3661 aaKnown RBP2.62□□□□□ -1.99
SMCO3-201ENST00000316048 LRBAP50851 2863 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 HRNRQ86YZ3 2850 aaPredicted RBP2.62□□□□□ -1.99
SMCO3-201ENST00000316048 IGHV3-66A0A0C4DH42 116 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 CLPSL1A2RUU4 121 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 TMEM189A5PLL7 270 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 RBAKDNA6NC62 111 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 ZNF207O43670 478 aaKnown RBP2.62□□□□□ -1.99
SMCO3-201ENST00000316048 IGHV3-11P01762 117 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 APCSP02743 223 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 TLX1NBP0CAT3 122 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 FABP4P15090 132 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 UBE2AP49459 152 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 FOXA3P55318 350 aaPredicted RBP2.62□□□□□ -1.99
SMCO3-201ENST00000316048 RPS20P60866 119 aaKnown RBP2.62□□□□□ -1.99
SMCO3-201ENST00000316048 PAFAH1B2P68402 229 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 Q0VG73 95 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 PDZD11Q5EBL8 140 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 OR10J3Q5JRS4 329 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 Q6AWC8 147 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 TMEM136Q6ZRR5 245 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 BAGE3Q86Y29 109 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 OR10D4PQ8NGN7 298 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 ZC2HC1AQ96GY0 325 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 TMEM208Q9BTX3 173 aa2.62□□□□□ -1.99
SMCO3-201ENST00000316048 UFC1Q9Y3C8 167 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms