RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 ZFYVE26Q68DK2 2539 aa12.46□□□□□ -0.42
SSH3-201ENST00000308127 CD7P09564 240 aa12.45□□□□□ -0.42
SSH3-201ENST00000308127 PRO0461Q9UI25 63 aa12.45□□□□□ -0.42
SSH3-201ENST00000308127 ACACBO00763 2458 aa12.45□□□□□ -0.42
SSH3-201ENST00000308127 IGHV4-61A0A0C4DH41 118 aa12.44□□□□□ -0.42
SSH3-201ENST00000308127 IGHV4-39P01824 125 aa12.44□□□□□ -0.42
SSH3-201ENST00000308127 SUMO4Q6EEV6 95 aa12.44□□□□□ -0.42
SSH3-201ENST00000308127 NACAE9PAV3 2078 aa12.44□□□□□ -0.42
SSH3-201ENST00000308127 ZNF688P0C7X2 276 aa12.44□□□□□ -0.42
SSH3-201ENST00000308127 TAL2Q16559 108 aa12.44□□□□□ -0.42
SSH3-201ENST00000308127 PSMG4Q5JS54 123 aa12.44□□□□□ -0.42
SSH3-201ENST00000308127 KLK9Q9UKQ9 250 aa12.44□□□□□ -0.42
SSH3-201ENST00000308127 H7C2G1 150 aa12.43□□□□□ -0.42
SSH3-201ENST00000308127 OVOL1O14753 267 aa12.43□□□□□ -0.42
SSH3-201ENST00000308127 HTN1P15515 57 aa12.43□□□□□ -0.42
SSH3-201ENST00000308127 SMCPP49901 116 aaPredicted RBP12.43□□□□□ -0.42
SSH3-201ENST00000308127 CLEC2AQ6UVW9 174 aa12.43□□□□□ -0.42
SSH3-201ENST00000308127 IGLV4-69A0A075B6H9 119 aa12.43□□□□□ -0.42
SSH3-201ENST00000308127 TSPAN13O95857 204 aa12.43□□□□□ -0.42
SSH3-201ENST00000308127 FAM223BA6NKX1 122 aa12.42□□□□□ -0.42
SSH3-201ENST00000308127 LINC00315P59091 139 aa12.42□□□□□ -0.42
SSH3-201ENST00000308127 FAM159AQ6UWV7 190 aa12.42□□□□□ -0.42
SSH3-201ENST00000308127 FAM223AQ8IWN6 122 aa12.42□□□□□ -0.42
SSH3-201ENST00000308127 IGHV1-69DA0A0B4J2H0 117 aa12.42□□□□□ -0.42
SSH3-201ENST00000308127 NDUFA4O00483 81 aa12.42□□□□□ -0.42
SSH3-201ENST00000308127 IGHV1-69P01742 117 aa12.42□□□□□ -0.42
SSH3-201ENST00000308127 DUX5Q96PT3 197 aa12.42□□□□□ -0.42
SSH3-201ENST00000308127 MDFICQ9P1T7 246 aa12.42□□□□□ -0.42
SSH3-201ENST00000308127 C19orf54Q5BKX5 351 aa12.41□□□□□ -0.42
SSH3-201ENST00000308127 ZNRF2Q8NHG8 242 aa12.41□□□□□ -0.42
SSH3-201ENST00000308127 SDHAF1A6NFY7 115 aa12.41□□□□□ -0.42
SSH3-201ENST00000308127 COX6B1P14854 86 aa12.41□□□□□ -0.42
SSH3-201ENST00000308127 NFE4Q86UQ8 179 aa12.41□□□□□ -0.42
SSH3-201ENST00000308127 ABCA12Q86UK0 2595 aa12.4□□□□□ -0.42
SSH3-201ENST00000308127 NDUFS8O00217 210 aa12.4□□□□□ -0.42
SSH3-201ENST00000308127 ZNF580Q9UK33 172 aa12.4□□□□□ -0.42
SSH3-201ENST00000308127 FBN2P35556 2912 aa12.4□□□□□ -0.42
SSH3-201ENST00000308127 PRM2P04554 102 aa12.4□□□□□ -0.42
SSH3-201ENST00000308127 ZNF56Q15929 161 aa12.4□□□□□ -0.43
SSH3-201ENST00000308127 KIF25-AS1Q9Y6Z4 181 aa12.4□□□□□ -0.43
SSH3-201ENST00000308127 IGHV3-73A0A0B4J1V6 119 aa12.39□□□□□ -0.43
SSH3-201ENST00000308127 KLK9Q2XQG4 91 aa12.39□□□□□ -0.43
SSH3-201ENST00000308127 LENEPQ9Y5L5 61 aa12.39□□□□□ -0.43
SSH3-201ENST00000308127 SYT8Q8NBV8 401 aa12.39□□□□□ -0.43
SSH3-201ENST00000308127 RAX2Q96IS3 184 aa12.39□□□□□ -0.43
SSH3-201ENST00000308127 WNK1Q9H4A3 2382 aa12.38□□□□□ -0.43
SSH3-201ENST00000308127 ADARB2-AS1A8MUL3 147 aa12.38□□□□□ -0.43
SSH3-201ENST00000308127 J3QR89 54 aa12.38□□□□□ -0.43
SSH3-201ENST00000308127 NIPBLQ6KC79 2804 aaeCLIP12.38□□□□□ -0.43
SSH3-201ENST00000308127 A0A0J9YY99 117 aa12.38□□□□□ -0.43
SSH3-201ENST00000308127 IGIPA6NJ69 53 aa12.38□□□□□ -0.43
SSH3-201ENST00000308127 FHL3Q13643 280 aa12.38□□□□□ -0.43
SSH3-201ENST00000308127 SPINK13Q1W4C9 94 aa12.37□□□□□ -0.43
SSH3-201ENST00000308127 LRRK2Q5S007 2527 aa12.37□□□□□ -0.43
SSH3-201ENST00000308127 RNASE13Q5GAN3 156 aaKnown RBP12.37□□□□□ -0.43
SSH3-201ENST00000308127 HIST2H2BDQ6DRA6 164 aa12.37□□□□□ -0.43
SSH3-201ENST00000308127 FAM19A4Q96LR4 140 aa12.37□□□□□ -0.43
SSH3-201ENST00000308127 SONP18583 2426 aaKnown RBP12.37□□□□□ -0.43
SSH3-201ENST00000308127 PTPN13Q12923 2485 aa12.36□□□□□ -0.43
SSH3-201ENST00000308127 DLX4Q92988 240 aaPredicted RBP12.36□□□□□ -0.43
SSH3-201ENST00000308127 KIR2DL4Q99706 377 aa12.36□□□□□ -0.43
SSH3-201ENST00000308127 DAZ1Q9NQZ3 744 aaKnown RBP12.36□□□□□ -0.43
SSH3-201ENST00000308127 TCL1BO95988 128 aa12.36□□□□□ -0.43
SSH3-201ENST00000308127 GNLYP22749 145 aa12.36□□□□□ -0.43
SSH3-201ENST00000308127 PMVKQ15126 192 aa12.36□□□□□ -0.43
SSH3-201ENST00000308127 CFAP126Q5VTH2 177 aa12.36□□□□□ -0.43
SSH3-201ENST00000308127 NRGNQ92686 78 aa12.36□□□□□ -0.43
SSH3-201ENST00000308127 EPG5Q9HCE0 2579 aa12.36□□□□□ -0.43
SSH3-201ENST00000308127 AVPP01185 164 aa12.36□□□□□ -0.43
SSH3-201ENST00000308127 POLR2KP53803 58 aaKnown RBP12.36□□□□□ -0.43
SSH3-201ENST00000308127 ANKRD17O75179 2603 aaKnown RBP12.35□□□□□ -0.43
SSH3-201ENST00000308127 SCGB1C2P0DMR2 95 aa12.35□□□□□ -0.43
SSH3-201ENST00000308127 UBE2D1P51668 147 aa12.35□□□□□ -0.43
SSH3-201ENST00000308127 FOXI1Q12951 378 aa12.35□□□□□ -0.43
SSH3-201ENST00000308127 NDUFA11Q86Y39 141 aa12.35□□□□□ -0.43
SSH3-201ENST00000308127 CFC1BP0CG36 223 aa12.35□□□□□ -0.43
SSH3-201ENST00000308127 CFC1P0CG37 223 aa12.35□□□□□ -0.43
SSH3-201ENST00000308127 P0DMU3 169 aa12.35□□□□□ -0.43
SSH3-201ENST00000308127 FAM231AP0DMU4 169 aa12.35□□□□□ -0.43
SSH3-201ENST00000308127 FAM231CP0DMU5 169 aa12.35□□□□□ -0.43
SSH3-201ENST00000308127 NF1P21359 2839 aa12.34□□□□□ -0.43
SSH3-201ENST00000308127 Q8N1Y9 231 aa12.34□□□□□ -0.43
SSH3-201ENST00000308127 MAPK1IP1LQ8NDC0 245 aa12.34□□□□□ -0.43
SSH3-201ENST00000308127 IGHV4-30-2A0A087WSY4 118 aa12.34□□□□□ -0.43
SSH3-201ENST00000308127 TMEM238LA0A1B0GVL6 79 aa12.34□□□□□ -0.43
SSH3-201ENST00000308127 A6NJY4 79 aa12.34□□□□□ -0.43
SSH3-201ENST00000308127 IGHG2P01859 326 aa12.34□□□□□ -0.43
SSH3-201ENST00000308127 CEMP1Q6PRD7 247 aaPredicted RBP12.34□□□□□ -0.43
SSH3-201ENST00000308127 TRAV2A0A0B4J234 112 aa12.33□□□□□ -0.44
SSH3-201ENST00000308127 Q5PR19 223 aa12.33□□□□□ -0.44
SSH3-201ENST00000308127 JMJD1CQ15652 2540 aa12.33□□□□□ -0.44
SSH3-201ENST00000308127 CHD6Q8TD26 2715 aa12.33□□□□□ -0.44
SSH3-201ENST00000308127 KLLNB2CW77 178 aa12.33□□□□□ -0.44
SSH3-201ENST00000308127 VCYO14598 125 aa12.33□□□□□ -0.44
SSH3-201ENST00000308127 PROK1P58294 105 aa12.33□□□□□ -0.44
SSH3-201ENST00000308127 HERVK_113P61574 105 aa12.33□□□□□ -0.44
SSH3-201ENST00000308127 DCANP1Q8TF63 244 aa12.33□□□□□ -0.44
SSH3-201ENST00000308127 SPATA25Q9BR10 227 aa12.33□□□□□ -0.44
SSH3-201ENST00000308127 C1QTNF4Q9BXJ3 329 aa12.32□□□□□ -0.44
SSH3-201ENST00000308127 TEX15Q9BXT5 2789 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms