RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 DCANP1Q8TF63 244 aa18.22■□□□□ 0.51
SPTSSA-201ENST00000298130 IGHV4-59P01825 116 aa18.21■□□□□ 0.51
SPTSSA-201ENST00000298130 ETDBQ3ZM63 59 aa18.21■□□□□ 0.51
SPTSSA-201ENST00000298130 MSMBP08118 114 aa18.21■□□□□ 0.51
SPTSSA-201ENST00000298130 FAM208BQ5VWN6 2430 aa18.21■□□□□ 0.51
SPTSSA-201ENST00000298130 KLLNB2CW77 178 aa18.2■□□□□ 0.5
SPTSSA-201ENST00000298130 ZFP2Q6ZN57 461 aa18.2■□□□□ 0.5
SPTSSA-201ENST00000298130 ACACBO00763 2458 aa18.2■□□□□ 0.5
SPTSSA-201ENST00000298130 SRSF9Q13242 221 aaKnown RBP eCLIP18.19■□□□□ 0.52e-6■□□□□ 9.7
SPTSSA-201ENST00000298130 PIEZO1Q92508 2521 aa18.19■□□□□ 0.5
SPTSSA-201ENST00000298130 APRG1Q8IVJ8 170 aa18.19■□□□□ 0.5
SPTSSA-201ENST00000298130 SDHAF1A6NFY7 115 aa18.19■□□□□ 0.5
SPTSSA-201ENST00000298130 RRN3P1Q2M238 152 aa18.19■□□□□ 0.5
SPTSSA-201ENST00000298130 HTN1P15515 57 aa18.18■□□□□ 0.5
SPTSSA-201ENST00000298130 SPINK13Q1W4C9 94 aa18.18■□□□□ 0.5
SPTSSA-201ENST00000298130 PGPEP1Q9NXJ5 209 aa18.18■□□□□ 0.5
SPTSSA-201ENST00000298130 ZFYVE26Q68DK2 2539 aa18.18■□□□□ 0.5
SPTSSA-201ENST00000298130 IGLV4-69A0A075B6H9 119 aa18.18■□□□□ 0.5
SPTSSA-201ENST00000298130 TAL2Q16559 108 aa18.18■□□□□ 0.5
SPTSSA-201ENST00000298130 DOPEY1Q5JWR5 2465 aa18.17■□□□□ 0.5
SPTSSA-201ENST00000298130 MORN3Q6PF18 240 aaPredicted RBP18.17■□□□□ 0.5
SPTSSA-201ENST00000298130 APOMO95445 188 aa18.17■□□□□ 0.5
SPTSSA-201ENST00000298130 TMEM170BQ5T4T1 132 aa18.17■□□□□ 0.5
SPTSSA-201ENST00000298130 ZNF56Q15929 161 aa18.16■□□□□ 0.5
SPTSSA-201ENST00000298130 PRORYQ9H606 182 aa18.16■□□□□ 0.5
SPTSSA-201ENST00000298130 HOXA3O43365 443 aaPredicted RBP18.16■□□□□ 0.5
SPTSSA-201ENST00000298130 INSL3P51460 131 aa18.16■□□□□ 0.5
SPTSSA-201ENST00000298130 LINC01549A6NIU2 74 aa18.15■□□□□ 0.5
SPTSSA-201ENST00000298130 H3BUA1 57 aa18.15■□□□□ 0.5
SPTSSA-201ENST00000298130 POLR2KP53803 58 aaKnown RBP18.15■□□□□ 0.5
SPTSSA-201ENST00000298130 TSPEAR-AS2P59090 65 aa18.15■□□□□ 0.5
SPTSSA-201ENST00000298130 IGIPA6NJ69 53 aa18.15■□□□□ 0.5
SPTSSA-201ENST00000298130 PRM2P04554 102 aa18.15■□□□□ 0.5
SPTSSA-201ENST00000298130 MED14OSP0DP75 135 aa18.15■□□□□ 0.5
SPTSSA-201ENST00000298130 ID1P41134 155 aa18.15■□□□□ 0.5
SPTSSA-201ENST00000298130 DEFB112Q30KQ8 113 aa18.15■□□□□ 0.5
SPTSSA-201ENST00000298130 MRPL16Q9NX20 251 aaKnown RBP18.15■□□□□ 0.5
SPTSSA-201ENST00000298130 IGSF10Q6WRI0 2623 aa18.15■□□□□ 0.5
SPTSSA-201ENST00000298130 IGHV3-64A0A075B6Q5 118 aa18.14■□□□□ 0.5
SPTSSA-201ENST00000298130 SYNJ2BPP57105 145 aa18.14■□□□□ 0.5
SPTSSA-201ENST00000298130 CFHR3Q02985 330 aa18.14■□□□□ 0.5
SPTSSA-201ENST00000298130 Q8N1Y9 231 aa18.14■□□□□ 0.5
SPTSSA-201ENST00000298130 HIST2H2BDQ6DRA6 164 aa18.14■□□□□ 0.49
SPTSSA-201ENST00000298130 KIR2DL4Q99706 377 aa18.14■□□□□ 0.49
SPTSSA-201ENST00000298130 GTSF1LQ9H1H1 148 aa18.14■□□□□ 0.49
SPTSSA-201ENST00000298130 SPANXB1Q9NS25 103 aaPredicted RBP18.14■□□□□ 0.49
SPTSSA-201ENST00000298130 MXRA5Q9NR99 2828 aa18.14■□□□□ 0.49
SPTSSA-201ENST00000298130 COX6B1P14854 86 aa18.13■□□□□ 0.49
SPTSSA-201ENST00000298130 ZNRF2Q8NHG8 242 aa18.13■□□□□ 0.49
SPTSSA-201ENST00000298130 NXPH4O95158 308 aa18.13■□□□□ 0.49
SPTSSA-201ENST00000298130 IGHV3-73A0A0B4J1V6 119 aa18.12■□□□□ 0.49
SPTSSA-201ENST00000298130 TGFAP01135 160 aa18.12■□□□□ 0.49
SPTSSA-201ENST00000298130 LOC107984156A0A0G2JMH3 177 aa18.12■□□□□ 0.49
SPTSSA-201ENST00000298130 ARL17AQ8IVW1 177 aa18.12■□□□□ 0.49
SPTSSA-201ENST00000298130 TSSC4Q9Y5U2 329 aaPredicted RBP18.12■□□□□ 0.49
SPTSSA-201ENST00000298130 PSMB8P28062 276 aa18.11■□□□□ 0.49
SPTSSA-201ENST00000298130 GAGE13Q4V321 117 aa18.11■□□□□ 0.49
SPTSSA-201ENST00000298130 IGHV4OR15-8A0A075B7B6 117 aa18.11■□□□□ 0.49
SPTSSA-201ENST00000298130 A0A087WW49 117 aa18.11■□□□□ 0.49
SPTSSA-201ENST00000298130 VCYO14598 125 aa18.11■□□□□ 0.49
SPTSSA-201ENST00000298130 PMVKQ15126 192 aa18.11■□□□□ 0.49
SPTSSA-201ENST00000298130 IGHV3-16A0A0C4DH30 117 aa18.1■□□□□ 0.49
SPTSSA-201ENST00000298130 PPP1R17O96001 155 aa18.1■□□□□ 0.49
SPTSSA-201ENST00000298130 ANKRD17O75179 2603 aaKnown RBP18.1■□□□□ 0.49
SPTSSA-201ENST00000298130 MYO9AB2RTY4 2548 aa18.09■□□□□ 0.49
SPTSSA-201ENST00000298130 POM121L12Q8N7R1 296 aa18.09■□□□□ 0.49
SPTSSA-201ENST00000298130 F8W1H4 67 aa18.09■□□□□ 0.49
SPTSSA-201ENST00000298130 TLN2Q9Y4G6 2542 aa18.08■□□□□ 0.49
SPTSSA-201ENST00000298130 SPAG8Q99932 426 aaPredicted RBP18.08■□□□□ 0.49
SPTSSA-201ENST00000298130 FBN2P35556 2912 aa18.08■□□□□ 0.49
SPTSSA-201ENST00000298130 A0A0J9YX75 114 aa18.08■□□□□ 0.48
SPTSSA-201ENST00000298130 TMEM238C9JI98 176 aa18.08■□□□□ 0.48
SPTSSA-201ENST00000298130 A0A1B0GWB2 263 aa18.07■□□□□ 0.48
SPTSSA-201ENST00000298130 ABCA12Q86UK0 2595 aa18.07■□□□□ 0.48
SPTSSA-201ENST00000298130 PSMB2P49721 201 aa18.07■□□□□ 0.48
SPTSSA-201ENST00000298130 PRO0461Q9UI25 63 aa18.07■□□□□ 0.48
SPTSSA-201ENST00000298130 LRRK2Q5S007 2527 aa18.06■□□□□ 0.48
SPTSSA-201ENST00000298130 TRBV7-9A0A0J9YWB2 115 aa18.06■□□□□ 0.48
SPTSSA-201ENST00000298130 A0A0J9YY99 117 aa18.06■□□□□ 0.48
SPTSSA-201ENST00000298130 B4DSR2 109 aa18.06■□□□□ 0.48
SPTSSA-201ENST00000298130 K7EMT4 169 aa18.06■□□□□ 0.48
SPTSSA-201ENST00000298130 BRI3O95415 125 aa18.06■□□□□ 0.48
SPTSSA-201ENST00000298130 P0DMU3 169 aa18.06■□□□□ 0.48
SPTSSA-201ENST00000298130 FAM231AP0DMU4 169 aa18.06■□□□□ 0.48
SPTSSA-201ENST00000298130 FAM231CP0DMU5 169 aa18.06■□□□□ 0.48
SPTSSA-201ENST00000298130 SMAGPQ0VAQ4 97 aa18.06■□□□□ 0.48
SPTSSA-201ENST00000298130 PTPN13Q12923 2485 aa18.06■□□□□ 0.48
SPTSSA-201ENST00000298130 ZNF580Q9UK33 172 aa18.06■□□□□ 0.48
SPTSSA-201ENST00000298130 M0QY20 66 aa18.05■□□□□ 0.48
SPTSSA-201ENST00000298130 NDUFS8O00217 210 aa18.05■□□□□ 0.48
SPTSSA-201ENST00000298130 TSPAN13O95857 204 aa18.05■□□□□ 0.48
SPTSSA-201ENST00000298130 PROK1P58294 105 aa18.05■□□□□ 0.48
SPTSSA-201ENST00000298130 DEFB136Q30KP8 78 aa18.05■□□□□ 0.48
SPTSSA-201ENST00000298130 ZNF876PQ49A33 203 aa18.05■□□□□ 0.48
SPTSSA-201ENST00000298130 ZNF418Q8TF45 676 aaPredicted RBP18.05■□□□□ 0.48
SPTSSA-201ENST00000298130 SNRPD3P62318 126 aaKnown RBP18.04■□□□□ 0.48
SPTSSA-201ENST00000298130 C9orf85Q96MD7 179 aa18.04■□□□□ 0.48
SPTSSA-201ENST00000298130 PTH2Q96A98 100 aa18.04■□□□□ 0.48
SPTSSA-201ENST00000298130 NOTCH3Q9UM47 2321 aa18.04■□□□□ 0.48
SPTSSA-201ENST00000298130 AZU1P20160 251 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms