RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 RPL39P62891 51 aaKnown RBP12.76□□□□□ -0.37
SH3RF1-201ENST00000284637 ELANEP08246 267 aa12.75□□□□□ -0.37
SH3RF1-201ENST00000284637 DEFB136Q30KP8 78 aa12.75□□□□□ -0.37
SH3RF1-201ENST00000284637 Q96MF0 132 aa12.75□□□□□ -0.37
SH3RF1-201ENST00000284637 IGLV2-8P01709 118 aa12.75□□□□□ -0.37
SH3RF1-201ENST00000284637 HOXD3P31249 432 aaPredicted RBP12.75□□□□□ -0.37
SH3RF1-201ENST00000284637 IGHV4-59P01825 116 aa12.75□□□□□ -0.37
SH3RF1-201ENST00000284637 KIAA1671Q9BY89 1806 aa12.75□□□□□ -0.37
SH3RF1-201ENST00000284637 RPL32P62910 135 aaKnown RBP12.75□□□□□ -0.37
SH3RF1-201ENST00000284637 FRMPD3Q5JV73 1810 aa12.74□□□□□ -0.37
SH3RF1-201ENST00000284637 C5orf38Q86SI9 138 aa12.74□□□□□ -0.37
SH3RF1-201ENST00000284637 UQCRQO14949 82 aa12.74□□□□□ -0.37
SH3RF1-201ENST00000284637 TCL1BO95988 128 aa12.74□□□□□ -0.37
SH3RF1-201ENST00000284637 NDUFA11Q86Y39 141 aa12.74□□□□□ -0.37
SH3RF1-201ENST00000284637 CACNA1AO00555 2505 aa12.74□□□□□ -0.37
SH3RF1-201ENST00000284637 NPBQ8NG41 125 aa12.74□□□□□ -0.37
SH3RF1-201ENST00000284637 H3BUA1 57 aa12.73□□□□□ -0.37
SH3RF1-201ENST00000284637 LINC00643Q86TS7 51 aa12.73□□□□□ -0.37
SH3RF1-201ENST00000284637 ZNF295-AS1Q8N0V1 137 aa12.73□□□□□ -0.37
SH3RF1-201ENST00000284637 DEFB112Q30KQ8 113 aa12.73□□□□□ -0.37
SH3RF1-201ENST00000284637 DSCAML1Q8TD84 2053 aa12.73□□□□□ -0.37
SH3RF1-201ENST00000284637 PLXNB3Q9ULL4 1909 aa12.73□□□□□ -0.37
SH3RF1-201ENST00000284637 Q8N1Y9 231 aa12.73□□□□□ -0.37
SH3RF1-201ENST00000284637 IGLV2-23P01705 113 aa12.73□□□□□ -0.37
SH3RF1-201ENST00000284637 AJUBAQ96IF1 538 aa12.73□□□□□ -0.37
SH3RF1-201ENST00000284637 BLCAPP62952 87 aa12.72□□□□□ -0.37
SH3RF1-201ENST00000284637 APRG1Q8IVJ8 170 aa12.72□□□□□ -0.37
SH3RF1-201ENST00000284637 SLC25A29Q8N8R3 303 aa12.72□□□□□ -0.37
SH3RF1-201ENST00000284637 DAND5Q8N907 189 aa12.72□□□□□ -0.37
SH3RF1-201ENST00000284637 DEFB1P60022 68 aa12.72□□□□□ -0.37
SH3RF1-201ENST00000284637 LOXL1Q08397 574 aaPredicted RBP12.72□□□□□ -0.37
SH3RF1-201ENST00000284637 Q71RC1 249 aaPredicted RBP12.72□□□□□ -0.37
SH3RF1-201ENST00000284637 MBD6Q96DN6 1003 aa12.72□□□□□ -0.37
SH3RF1-201ENST00000284637 PLXNB1O43157 2135 aa12.72□□□□□ -0.37
SH3RF1-201ENST00000284637 TEX22C9J3V5 150 aa12.72□□□□□ -0.37
SH3RF1-201ENST00000284637 SONP18583 2426 aaKnown RBP12.72□□□□□ -0.37
SH3RF1-201ENST00000284637 IGKV3D-7A0A0C4DH55 119 aa12.71□□□□□ -0.38
SH3RF1-201ENST00000284637 A0A0J9YY99 117 aa12.71□□□□□ -0.38
SH3RF1-201ENST00000284637 ZNF503Q96F45 646 aa12.71□□□□□ -0.38
SH3RF1-201ENST00000284637 COL4A3Q01955 1670 aa12.71□□□□□ -0.38
SH3RF1-201ENST00000284637 C2orf91Q6ZV80 131 aa12.7□□□□□ -0.38
SH3RF1-201ENST00000284637 ALPK3Q96L96 1907 aa12.7□□□□□ -0.38
SH3RF1-201ENST00000284637 PTPN13Q12923 2485 aa12.7□□□□□ -0.38
SH3RF1-201ENST00000284637 WI2-2373I1.2A0A1W2PRP0 233 aa12.7□□□□□ -0.38
SH3RF1-201ENST00000284637 TRBV6-1A0A0K0K1D8 114 aa12.69□□□□□ -0.38
SH3RF1-201ENST00000284637 PRB1P04280 392 aa12.69□□□□□ -0.38
SH3RF1-201ENST00000284637 Q6ZPA2 131 aa12.69□□□□□ -0.38
SH3RF1-201ENST00000284637 BAALCQ8WXS3 180 aa12.69□□□□□ -0.38
SH3RF1-201ENST00000284637 ORMDL1Q9P0S3 153 aa12.69□□□□□ -0.38
SH3RF1-201ENST00000284637 PRR14LQ5THK1 2151 aa12.69□□□□□ -0.38
SH3RF1-201ENST00000284637 SRCAPQ6ZRS2 3230 aa12.69□□□□□ -0.38
SH3RF1-201ENST00000284637 C2CD3Q4AC94 2353 aa12.69□□□□□ -0.38
SH3RF1-201ENST00000284637 P0C879 139 aa12.69□□□□□ -0.38
SH3RF1-201ENST00000284637 Q6ZQT7 251 aa12.69□□□□□ -0.38
SH3RF1-201ENST00000284637 TRAV4A0A0B4J268 109 aa12.69□□□□□ -0.38
SH3RF1-201ENST00000284637 C16orf54Q6UWD8 224 aa12.69□□□□□ -0.38
SH3RF1-201ENST00000284637 Q8N9W7 124 aa12.69□□□□□ -0.38
SH3RF1-201ENST00000284637 J3QLI3 93 aa12.68□□□□□ -0.38
SH3RF1-201ENST00000284637 IGHV4-38-2P0DP08 117 aa12.68□□□□□ -0.38
SH3RF1-201ENST00000284637 MUC6Q6W4X9 2439 aa12.68□□□□□ -0.38
SH3RF1-201ENST00000284637 MSMPQ1L6U9 139 aa12.68□□□□□ -0.38
SH3RF1-201ENST00000284637 MYO18BQ8IUG5 2567 aa12.68□□□□□ -0.38
SH3RF1-201ENST00000284637 SLURP1P55000 103 aa12.68□□□□□ -0.38
SH3RF1-201ENST00000284637 TOMM6Q96B49 74 aa12.68□□□□□ -0.38
SH3RF1-201ENST00000284637 C11orf86A6NJI1 115 aa12.67□□□□□ -0.38
SH3RF1-201ENST00000284637 LINC00322Q6ZN03 302 aaPredicted RBP12.67□□□□□ -0.38
SH3RF1-201ENST00000284637 SND1-IT1Q9HBX3 110 aa12.67□□□□□ -0.38
SH3RF1-201ENST00000284637 IGHV4-61A0A0C4DH41 118 aa12.67□□□□□ -0.38
SH3RF1-201ENST00000284637 IGLV1-47P01700 117 aa12.67□□□□□ -0.38
SH3RF1-201ENST00000284637 CRYGBP07316 175 aa12.67□□□□□ -0.38
SH3RF1-201ENST00000284637 IGFL2Q6UWQ7 119 aa12.67□□□□□ -0.38
SH3RF1-201ENST00000284637 PIP4P1Q86T03 277 aa12.67□□□□□ -0.38
SH3RF1-201ENST00000284637 LGALS9O00182 355 aa12.66□□□□□ -0.38
SH3RF1-201ENST00000284637 PROP1O75360 226 aa12.66□□□□□ -0.38
SH3RF1-201ENST00000284637 VPREB3Q9UKI3 123 aa12.66□□□□□ -0.38
SH3RF1-201ENST00000284637 hADV29S1A0JD25 119 aa12.66□□□□□ -0.38
SH3RF1-201ENST00000284637 WISP2O76076 250 aa12.66□□□□□ -0.38
SH3RF1-201ENST00000284637 IGHV4-4A0A075B6R2 117 aa12.66□□□□□ -0.38
SH3RF1-201ENST00000284637 BRWD1-AS2P59051 145 aa12.65□□□□□ -0.38
SH3RF1-201ENST00000284637 UFSP1Q6NVU6 142 aa12.65□□□□□ -0.38
SH3RF1-201ENST00000284637 LINC00310P59036 64 aa12.65□□□□□ -0.38
SH3RF1-201ENST00000284637 NCKAP5O14513 1909 aa12.65□□□□□ -0.38
SH3RF1-201ENST00000284637 H0YGX0 51 aa12.65□□□□□ -0.39
SH3RF1-201ENST00000284637 C9orf47Q6ZRZ4 202 aa12.65□□□□□ -0.39
SH3RF1-201ENST00000284637 C3orf22Q8N5N4 141 aa12.65□□□□□ -0.39
SH3RF1-201ENST00000284637 SORL1Q92673 2214 aa12.64□□□□□ -0.39
SH3RF1-201ENST00000284637 IGKV1D-37A0A075B6S9 117 aa12.64□□□□□ -0.39
SH3RF1-201ENST00000284637 Q8N976 141 aa12.64□□□□□ -0.39
SH3RF1-201ENST00000284637 CUL9Q8IWT3 2517 aa12.64□□□□□ -0.39
SH3RF1-201ENST00000284637 SEM1Q6ZVN7 128 aa12.64□□□□□ -0.39
SH3RF1-201ENST00000284637 MLST8Q9BVC4 326 aa12.64□□□□□ -0.39
SH3RF1-201ENST00000284637 IGLV10-54A0A075B6I4 117 aa12.64□□□□□ -0.39
SH3RF1-201ENST00000284637 APOC4P55056 127 aa12.64□□□□□ -0.39
SH3RF1-201ENST00000284637 XGP55808 180 aa12.64□□□□□ -0.39
SH3RF1-201ENST00000284637 DEFB105AQ8NG35 78 aa12.64□□□□□ -0.39
SH3RF1-201ENST00000284637 PSMB8P28062 276 aa12.64□□□□□ -0.39
SH3RF1-201ENST00000284637 OBSL1O75147 1896 aa12.64□□□□□ -0.39
SH3RF1-201ENST00000284637 CLEC2BQ92478 149 aa12.63□□□□□ -0.39
SH3RF1-201ENST00000284637 TIMM17AQ99595 171 aa12.63□□□□□ -0.39
SH3RF1-201ENST00000284637 TEX49A0A1B0GTD5 131 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms