RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 ANKRD29Q8N6D5 301 aa12.16□□□□□ -0.46
MAP1LC3B-201ENST00000268607 KLK15Q9H2R5 256 aa12.16□□□□□ -0.46
MAP1LC3B-201ENST00000268607 GAGE2DQ9UEU5 116 aa12.16□□□□□ -0.46
MAP1LC3B-201ENST00000268607 TRAV4A0A0B4J268 109 aa12.16□□□□□ -0.46
MAP1LC3B-201ENST00000268607 G3V318 75 aa12.16□□□□□ -0.46
MAP1LC3B-201ENST00000268607 TCL1BO95988 128 aa12.16□□□□□ -0.46
MAP1LC3B-201ENST00000268607 RPL7P18124 248 aaKnown RBP12.16□□□□□ -0.46
MAP1LC3B-201ENST00000268607 EBI3Q14213 229 aa12.16□□□□□ -0.46
MAP1LC3B-201ENST00000268607 VCX2Q9H322 139 aa12.16□□□□□ -0.46
MAP1LC3B-201ENST00000268607 A8MWV9 139 aa12.15□□□□□ -0.46
MAP1LC3B-201ENST00000268607 LGALS1P09382 135 aaKnown RBP12.15□□□□□ -0.46
MAP1LC3B-201ENST00000268607 UBE2D3P61077 147 aa12.15□□□□□ -0.46
MAP1LC3B-201ENST00000268607 UBE2D2P62837 147 aa12.15□□□□□ -0.46
MAP1LC3B-201ENST00000268607 NRACQ8N912 160 aa12.15□□□□□ -0.46
MAP1LC3B-201ENST00000268607 HIF1ANQ9NWT6 349 aa12.15□□□□□ -0.46
MAP1LC3B-201ENST00000268607 CENPVL3A0A0U1RRI6 287 aa12.15□□□□□ -0.46
MAP1LC3B-201ENST00000268607 PRAC2D3DTV9 90 aa12.15□□□□□ -0.46
MAP1LC3B-201ENST00000268607 CRLF1O75462 422 aa12.15□□□□□ -0.46
MAP1LC3B-201ENST00000268607 LINC00527Q9UJ94 153 aa12.15□□□□□ -0.46
MAP1LC3B-201ENST00000268607 SETXQ7Z333 2677 aaKnown RBP12.15□□□□□ -0.46
MAP1LC3B-201ENST00000268607 OTOGQ6ZRI0 2925 aa12.15□□□□□ -0.47
MAP1LC3B-201ENST00000268607 OOSP1A8MZH6 123 aa12.14□□□□□ -0.47
MAP1LC3B-201ENST00000268607 ATP6V0E1O15342 81 aa12.14□□□□□ -0.47
MAP1LC3B-201ENST00000268607 SRSF2Q01130 221 aaKnown RBP12.14□□□□□ -0.47
MAP1LC3B-201ENST00000268607 IL17RELQ6ZVW7 336 aa12.14□□□□□ -0.47
MAP1LC3B-201ENST00000268607 IGKV3D-20A0A0C4DH25 116 aa12.14□□□□□ -0.47
MAP1LC3B-201ENST00000268607 TMEM262E9PQX1 116 aa12.14□□□□□ -0.47
MAP1LC3B-201ENST00000268607 F8VRH5 84 aa12.14□□□□□ -0.47
MAP1LC3B-201ENST00000268607 H7C1H1 209 aa12.14□□□□□ -0.47
MAP1LC3B-201ENST00000268607 CLEC3BP05452 202 aa12.14□□□□□ -0.47
MAP1LC3B-201ENST00000268607 CTSGP08311 255 aa12.14□□□□□ -0.47
MAP1LC3B-201ENST00000268607 SRSF9Q13242 221 aaKnown RBP eCLIP12.14□□□□□ -0.47
MAP1LC3B-201ENST00000268607 C11orf21Q9P2W6 132 aa12.14□□□□□ -0.47
MAP1LC3B-201ENST00000268607 NPFFO15130 113 aa12.13□□□□□ -0.47
MAP1LC3B-201ENST00000268607 UBE2D1P51668 147 aa12.13□□□□□ -0.47
MAP1LC3B-201ENST00000268607 TTC32Q5I0X7 151 aa12.13□□□□□ -0.47
MAP1LC3B-201ENST00000268607 TMEM78Q5T7P6 136 aa12.13□□□□□ -0.47
MAP1LC3B-201ENST00000268607 LINC01619G3V211 115 aa12.13□□□□□ -0.47
MAP1LC3B-201ENST00000268607 C15orf32Q32M92 178 aa12.13□□□□□ -0.47
MAP1LC3B-201ENST00000268607 RNF182Q8N6D2 247 aa12.13□□□□□ -0.47
MAP1LC3B-201ENST00000268607 IGHV3OR16-13A0A075B7E8 117 aa12.12□□□□□ -0.47
MAP1LC3B-201ENST00000268607 IGHV3-74A0A0B4J1X5 117 aa12.12□□□□□ -0.47
MAP1LC3B-201ENST00000268607 SNCGO76070 127 aa12.12□□□□□ -0.47
MAP1LC3B-201ENST00000268607 WFDC11Q8NEX6 87 aa12.12□□□□□ -0.47
MAP1LC3B-201ENST00000268607 Q96MF0 132 aa12.12□□□□□ -0.47
MAP1LC3B-201ENST00000268607 TNFRSF18Q9Y5U5 241 aa12.12□□□□□ -0.47
MAP1LC3B-201ENST00000268607 IGHV3-66A0A0C4DH42 116 aa12.12□□□□□ -0.47
MAP1LC3B-201ENST00000268607 IFITM1P13164 125 aa12.12□□□□□ -0.47
MAP1LC3B-201ENST00000268607 DEFB113Q30KQ7 82 aa12.12□□□□□ -0.47
MAP1LC3B-201ENST00000268607 SCGB1D4Q6XE38 83 aa12.12□□□□□ -0.47
MAP1LC3B-201ENST00000268607 TRAV8-2A0A0B4J237 113 aa12.11□□□□□ -0.47
MAP1LC3B-201ENST00000268607 MSMBP08118 114 aa12.11□□□□□ -0.47
MAP1LC3B-201ENST00000268607 PLEKHB2Q96CS7 222 aa12.11□□□□□ -0.47
MAP1LC3B-201ENST00000268607 FAM159AQ6UWV7 190 aa12.11□□□□□ -0.47
MAP1LC3B-201ENST00000268607 Q6ZQT7 251 aa12.11□□□□□ -0.47
MAP1LC3B-201ENST00000268607 CR1P17927 2039 aa12.1□□□□□ -0.47
MAP1LC3B-201ENST00000268607 SBSPONQ8IVN8 264 aa12.1□□□□□ -0.47
MAP1LC3B-201ENST00000268607 SCGB3A1Q96QR1 104 aa12.1□□□□□ -0.47
MAP1LC3B-201ENST00000268607 IGHV3-49A0A0A0MS15 119 aa12.1□□□□□ -0.47
MAP1LC3B-201ENST00000268607 TRAV12-1A0A0B4J245 112 aa12.1□□□□□ -0.47
MAP1LC3B-201ENST00000268607 ZNF815PA8K554 130 aa12.1□□□□□ -0.47
MAP1LC3B-201ENST00000268607 CD7P09564 240 aa12.1□□□□□ -0.47
MAP1LC3B-201ENST00000268607 RAX2Q96IS3 184 aa12.1□□□□□ -0.47
MAP1LC3B-201ENST00000268607 PRADC1Q9BSG0 188 aa12.1□□□□□ -0.47
MAP1LC3B-201ENST00000268607 CLEC19AQ6UXS0 136 aa12.09□□□□□ -0.47
MAP1LC3B-201ENST00000268607 IGHV7-4-1A0A0J9YVY3 117 aa12.09□□□□□ -0.47
MAP1LC3B-201ENST00000268607 SCGB1C2P0DMR2 95 aa12.09□□□□□ -0.47
MAP1LC3B-201ENST00000268607 LY6EQ16553 131 aa12.09□□□□□ -0.47
MAP1LC3B-201ENST00000268607 NDUFA11Q86Y39 141 aa12.09□□□□□ -0.47
MAP1LC3B-201ENST00000268607 SPANXN1Q5VSR9 72 aa12.08□□□□□ -0.48
MAP1LC3B-201ENST00000268607 SCGB2A1O75556 95 aa12.08□□□□□ -0.48
MAP1LC3B-201ENST00000268607 LYRM7Q5U5X0 104 aa12.08□□□□□ -0.48
MAP1LC3B-201ENST00000268607 NEXN-AS1Q8NBZ9 246 aa12.08□□□□□ -0.48
MAP1LC3B-201ENST00000268607 KLHL30-AS1Q8NEE0 82 aa12.08□□□□□ -0.48
MAP1LC3B-201ENST00000268607 SLC25A16P16260 332 aa12.07□□□□□ -0.48
MAP1LC3B-201ENST00000268607 CRIP2P52943 208 aaPredicted RBP12.07□□□□□ -0.48
MAP1LC3B-201ENST00000268607 A0A096LNT2 108 aa12.07□□□□□ -0.48
MAP1LC3B-201ENST00000268607 FAM110DQ8TAY7 271 aaPredicted RBP12.07□□□□□ -0.48
MAP1LC3B-201ENST00000268607 SMIM2Q9BVW6 85 aa12.07□□□□□ -0.48
MAP1LC3B-201ENST00000268607 SLC25A20O43772 301 aa12.06□□□□□ -0.48
MAP1LC3B-201ENST00000268607 ARL3P36405 182 aa12.06□□□□□ -0.48
MAP1LC3B-201ENST00000268607 AGPAT4-IT1Q9H0P7 198 aa12.06□□□□□ -0.48
MAP1LC3B-201ENST00000268607 B4DSR2 109 aa12.06□□□□□ -0.48
MAP1LC3B-201ENST00000268607 SPRY2O43597 315 aa12.06□□□□□ -0.48
MAP1LC3B-201ENST00000268607 KRTAP1-3Q8IUG1 177 aa12.06□□□□□ -0.48
MAP1LC3B-201ENST00000268607 C9JAW5 83 aa12.05□□□□□ -0.48
MAP1LC3B-201ENST00000268607 C5orf56Q8N8D9 126 aa12.05□□□□□ -0.48
MAP1LC3B-201ENST00000268607 CCDC140Q96MF4 163 aa12.05□□□□□ -0.48
MAP1LC3B-201ENST00000268607 C3orf56Q8N813 242 aa12.05□□□□□ -0.48
MAP1LC3B-201ENST00000268607 BAALCQ8WXS3 180 aa12.05□□□□□ -0.48
MAP1LC3B-201ENST00000268607 TOMM6Q96B49 74 aa12.05□□□□□ -0.48
MAP1LC3B-201ENST00000268607 NIPBLQ6KC79 2804 aaeCLIP12.05□□□□□ -0.488e-7■■■□□ 15.3
MAP1LC3B-201ENST00000268607 ID1P41134 155 aa12.04□□□□□ -0.48
MAP1LC3B-201ENST00000268607 ASIPP42127 132 aa12.04□□□□□ -0.48
MAP1LC3B-201ENST00000268607 MEIG1Q5JSS6 88 aa12.04□□□□□ -0.48
MAP1LC3B-201ENST00000268607 RASL10AQ92737 203 aa12.04□□□□□ -0.48
MAP1LC3B-201ENST00000268607 DUX5Q96PT3 197 aa12.04□□□□□ -0.48
MAP1LC3B-201ENST00000268607 IGHV1-69DA0A0B4J2H0 117 aa12.04□□□□□ -0.48
MAP1LC3B-201ENST00000268607 IGHV1-69P01742 117 aa12.04□□□□□ -0.48
MAP1LC3B-201ENST00000268607 CFC1BP0CG36 223 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms