RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 IGF2RP11717 2491 aa10.03□□□□□ -0.8
H3F3B-201ENST00000254810 SPTAN1Q13813 2472 aaKnown RBP10.03□□□□□ -0.8
H3F3B-201ENST00000254810 LMO4P61968 165 aa10.03□□□□□ -0.8
H3F3B-201ENST00000254810 Q6ZUT4 128 aa10.03□□□□□ -0.8
H3F3B-201ENST00000254810 COL6A6A6NMZ7 2263 aa10.03□□□□□ -0.8
H3F3B-201ENST00000254810 NXPH4O95158 308 aa10.03□□□□□ -0.8
H3F3B-201ENST00000254810 PMVKQ15126 192 aa10.03□□□□□ -0.8
H3F3B-201ENST00000254810 TMEM170BQ5T4T1 132 aa10.03□□□□□ -0.8
H3F3B-201ENST00000254810 APRG1Q8IVJ8 170 aa10.03□□□□□ -0.8
H3F3B-201ENST00000254810 BPESC1Q9GZL8 116 aa10.03□□□□□ -0.8
H3F3B-201ENST00000254810 CRYBA4P53673 196 aa10.02□□□□□ -0.81
H3F3B-201ENST00000254810 FOXC1Q12948 553 aa10.02□□□□□ -0.81
H3F3B-201ENST00000254810 MED14OSP0DP75 135 aa10.02□□□□□ -0.81
H3F3B-201ENST00000254810 CRIP2P52943 208 aaPredicted RBP10.02□□□□□ -0.81
H3F3B-201ENST00000254810 BRD3OSQ6XYD6 125 aa10.02□□□□□ -0.81
H3F3B-201ENST00000254810 SLC25A29Q8N8R3 303 aa10.02□□□□□ -0.81
H3F3B-201ENST00000254810 GEMIN7Q9H840 131 aaKnown RBP10.02□□□□□ -0.81
H3F3B-201ENST00000254810 MAP1AP78559 2803 aaPredicted RBP10.01□□□□□ -0.81
H3F3B-201ENST00000254810 IGHV4OR15-8A0A075B7B6 117 aa10.01□□□□□ -0.81
H3F3B-201ENST00000254810 A0A087WW49 117 aa10.01□□□□□ -0.81
H3F3B-201ENST00000254810 TEN1Q86WV5 123 aa10.01□□□□□ -0.81
H3F3B-201ENST00000254810 FAM223BA6NKX1 122 aa10.01□□□□□ -0.81
H3F3B-201ENST00000254810 FAM223AQ8IWN6 122 aa10.01□□□□□ -0.81
H3F3B-201ENST00000254810 ANKRD29Q8N6D5 301 aa10.01□□□□□ -0.81
H3F3B-201ENST00000254810 SBSPONQ8IVN8 264 aa10□□□□□ -0.81
H3F3B-201ENST00000254810 PPDPFLQ8WWR9 84 aa10□□□□□ -0.81
H3F3B-201ENST00000254810 RAX2Q96IS3 184 aa10□□□□□ -0.81
H3F3B-201ENST00000254810 ZNF580Q9UK33 172 aa10□□□□□ -0.81
H3F3B-201ENST00000254810 IGHV1-69DA0A0B4J2H0 117 aa10□□□□□ -0.81
H3F3B-201ENST00000254810 SDHAF1A6NFY7 115 aa10□□□□□ -0.81
H3F3B-201ENST00000254810 NDUFA4O00483 81 aa10□□□□□ -0.81
H3F3B-201ENST00000254810 ZNF876PQ49A33 203 aa10□□□□□ -0.81
H3F3B-201ENST00000254810 C10orf126Q8N4M7 172 aa10□□□□□ -0.81
H3F3B-201ENST00000254810 MOB4Q9Y3A3 225 aa10□□□□□ -0.81
H3F3B-201ENST00000254810 CRYBG3Q68DQ2 2970 aa10□□□□□ -0.81
H3F3B-201ENST00000254810 IGHV3-64A0A075B6Q5 118 aa9.99□□□□□ -0.81
H3F3B-201ENST00000254810 F5H697 171 aa9.99□□□□□ -0.81
H3F3B-201ENST00000254810 ZNF256Q9Y2P7 627 aaPredicted RBP9.99□□□□□ -0.81
H3F3B-201ENST00000254810 ELANEP08246 267 aa9.99□□□□□ -0.81
H3F3B-201ENST00000254810 GATA3P23771 443 aa9.99□□□□□ -0.81
H3F3B-201ENST00000254810 HERVK_113P61574 105 aa9.99□□□□□ -0.81
H3F3B-201ENST00000254810 FAM74A4Q5TZK3 123 aa9.99□□□□□ -0.81
H3F3B-201ENST00000254810 TRPT1Q86TN4 253 aaKnown RBP9.99□□□□□ -0.81
H3F3B-201ENST00000254810 RHPN1-AS1Q9BWJ2 59 aa9.99□□□□□ -0.81
H3F3B-201ENST00000254810 UBTD1Q9HAC8 227 aa9.99□□□□□ -0.81
H3F3B-201ENST00000254810 TRAV12-3A0A0B4J271 114 aa9.98□□□□□ -0.81
H3F3B-201ENST00000254810 KLLNB2CW77 178 aa9.98□□□□□ -0.81
H3F3B-201ENST00000254810 J3QQQ9 107 aa9.98□□□□□ -0.81
H3F3B-201ENST00000254810 LY6EQ16553 131 aa9.98□□□□□ -0.81
H3F3B-201ENST00000254810 A4D1N5 150 aa9.98□□□□□ -0.81
H3F3B-201ENST00000254810 VCYO14598 125 aa9.98□□□□□ -0.81
H3F3B-201ENST00000254810 PPP1R17O96001 155 aa9.98□□□□□ -0.81
H3F3B-201ENST00000254810 RPL32P62910 135 aaKnown RBP9.98□□□□□ -0.81
H3F3B-201ENST00000254810 TIMM17AQ99595 171 aa9.98□□□□□ -0.81
H3F3B-201ENST00000254810 PRO1854Q9UHT4 67 aa9.98□□□□□ -0.81
H3F3B-201ENST00000254810 H7C2G1 150 aa9.97□□□□□ -0.81
H3F3B-201ENST00000254810 TMEM141Q96I45 108 aa9.97□□□□□ -0.81
H3F3B-201ENST00000254810 MDFICQ9P1T7 246 aa9.97□□□□□ -0.81
H3F3B-201ENST00000254810 A8MWV9 139 aa9.97□□□□□ -0.81
H3F3B-201ENST00000254810 SCGB1C2P0DMR2 95 aa9.97□□□□□ -0.81
H3F3B-201ENST00000254810 TRBV27A0A0K0K1C4 114 aa9.96□□□□□ -0.81
H3F3B-201ENST00000254810 P0DMU3 169 aa9.96□□□□□ -0.81
H3F3B-201ENST00000254810 FAM231AP0DMU4 169 aa9.96□□□□□ -0.81
H3F3B-201ENST00000254810 FAM231CP0DMU5 169 aa9.96□□□□□ -0.81
H3F3B-201ENST00000254810 BLCAPP62952 87 aa9.96□□□□□ -0.81
H3F3B-201ENST00000254810 PAPPA-AS1Q5QFB9 102 aa9.96□□□□□ -0.81
H3F3B-201ENST00000254810 FAM159AQ6UWV7 190 aa9.96□□□□□ -0.81
H3F3B-201ENST00000254810 HIVEP3Q5T1R4 2406 aa9.96□□□□□ -0.81
H3F3B-201ENST00000254810 TRAV12-2A0A075B6T6 113 aa9.96□□□□□ -0.82
H3F3B-201ENST00000254810 TMEM263Q8WUH6 116 aaKnown RBP9.96□□□□□ -0.82
H3F3B-201ENST00000254810 RNF183Q96D59 192 aa9.96□□□□□ -0.82
H3F3B-201ENST00000254810 IGKV3-20P01619 116 aa9.95□□□□□ -0.82
H3F3B-201ENST00000254810 ZNF688P0C7X2 276 aa9.95□□□□□ -0.82
H3F3B-201ENST00000254810 PF4V1P10720 104 aa9.95□□□□□ -0.82
H3F3B-201ENST00000254810 TRBV20-1A0A075B6N2 111 aa9.95□□□□□ -0.82
H3F3B-201ENST00000254810 IGHV3-33P01772 117 aa9.95□□□□□ -0.82
H3F3B-201ENST00000254810 LGALS3P17931 250 aaKnown RBP9.95□□□□□ -0.82
H3F3B-201ENST00000254810 CELSR2Q9HCU4 2923 aa9.94□□□□□ -0.82
H3F3B-201ENST00000254810 TRAV2A0A0B4J234 112 aa9.94□□□□□ -0.82
H3F3B-201ENST00000254810 TMEM223A0PJW6 202 aa9.94□□□□□ -0.82
H3F3B-201ENST00000254810 C9JAW5 83 aa9.94□□□□□ -0.82
H3F3B-201ENST00000254810 LGALS9O00182 355 aa9.94□□□□□ -0.82
H3F3B-201ENST00000254810 MUSTN1Q8IVN3 82 aa9.94□□□□□ -0.82
H3F3B-201ENST00000254810 ADARB2-AS1A8MUL3 147 aa9.94□□□□□ -0.82
H3F3B-201ENST00000254810 M0QY20 66 aa9.94□□□□□ -0.82
H3F3B-201ENST00000254810 IGHV3-16A0A0C4DH30 117 aa9.93□□□□□ -0.82
H3F3B-201ENST00000254810 SLC25A20O43772 301 aa9.93□□□□□ -0.82
H3F3B-201ENST00000254810 IGHV4-38-2P0DP08 117 aa9.93□□□□□ -0.82
H3F3B-201ENST00000254810 ZNF22P17026 224 aaPredicted RBP9.93□□□□□ -0.82
H3F3B-201ENST00000254810 LYRM7Q5U5X0 104 aa9.93□□□□□ -0.82
H3F3B-201ENST00000254810 DCANP1Q8TF63 244 aa9.93□□□□□ -0.82
H3F3B-201ENST00000254810 A0A0J9YXV3 536 aa9.93□□□□□ -0.82
H3F3B-201ENST00000254810 ZNF56Q15929 161 aa9.93□□□□□ -0.82
H3F3B-201ENST00000254810 TRBV7-9A0A0J9YWB2 115 aa9.92□□□□□ -0.82
H3F3B-201ENST00000254810 TRBV6-5A0A0K0K1A5 114 aa9.92□□□□□ -0.82
H3F3B-201ENST00000254810 IGHV1-69P01742 117 aa9.92□□□□□ -0.82
H3F3B-201ENST00000254810 C9orf85Q96MD7 179 aa9.92□□□□□ -0.82
H3F3B-201ENST00000254810 LEPROTO15243 131 aa9.91□□□□□ -0.82
H3F3B-201ENST00000254810 TMEM95Q3KNT9 176 aa9.91□□□□□ -0.82
H3F3B-201ENST00000254810 Q8N1Y9 231 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms