RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 TNRC6BQ9UPQ9 1833 aaKnown RBP10.21□□□□□ -0.78
COL1A1-201ENST00000225964 A0A1B0GX51 115 aa10.21□□□□□ -0.78
COL1A1-201ENST00000225964 RPL39P62891 51 aaKnown RBP10.21□□□□□ -0.78
COL1A1-201ENST00000225964 IGKV2-24A0A0C4DH68 120 aa10.2□□□□□ -0.78
COL1A1-201ENST00000225964 ZNF747Q9BV97 191 aa10.2□□□□□ -0.78
COL1A1-201ENST00000225964 EP300Q09472 2414 aaPredicted RBP10.2□□□□□ -0.78
COL1A1-201ENST00000225964 PRAC2D3DTV9 90 aa10.2□□□□□ -0.78
COL1A1-201ENST00000225964 DIRC1Q969H9 104 aa10.2□□□□□ -0.78
COL1A1-201ENST00000225964 FGF23Q9GZV9 251 aaPredicted RBP10.2□□□□□ -0.78
COL1A1-201ENST00000225964 CEP250Q9BV73 2442 aa10.2□□□□□ -0.78
COL1A1-201ENST00000225964 IGKV3D-7A0A0C4DH55 119 aa10.19□□□□□ -0.78
COL1A1-201ENST00000225964 DEFB1P60022 68 aa10.19□□□□□ -0.78
COL1A1-201ENST00000225964 HIGD2BQ4VC39 106 aa10.19□□□□□ -0.78
COL1A1-201ENST00000225964 WI2-2373I1.2A0A1W2PRP0 233 aa10.19□□□□□ -0.78
COL1A1-201ENST00000225964 GAGE12HA6NDE8 117 aa10.19□□□□□ -0.78
COL1A1-201ENST00000225964 H3BQ85 93 aa10.19□□□□□ -0.78
COL1A1-201ENST00000225964 MSRB1Q9NZV6 116 aa10.19□□□□□ -0.78
COL1A1-201ENST00000225964 H0YGX0 51 aa10.19□□□□□ -0.78
COL1A1-201ENST00000225964 NDUFA11Q86Y39 141 aa10.19□□□□□ -0.78
COL1A1-201ENST00000225964 TMEM61Q8N0U2 210 aa10.19□□□□□ -0.78
COL1A1-201ENST00000225964 SEC61GP60059 68 aa10.18□□□□□ -0.78
COL1A1-201ENST00000225964 TRBV12-3P01733 135 aa10.18□□□□□ -0.78
COL1A1-201ENST00000225964 K7EMT4 169 aa10.18□□□□□ -0.78
COL1A1-201ENST00000225964 Q8N7P7 452 aa10.18□□□□□ -0.78
COL1A1-201ENST00000225964 INSL3P51460 131 aa10.18□□□□□ -0.78
COL1A1-201ENST00000225964 TMEM263Q8WUH6 116 aaKnown RBP10.18□□□□□ -0.78
COL1A1-201ENST00000225964 CCL25O15444 150 aa10.18□□□□□ -0.78
COL1A1-201ENST00000225964 C14orf177Q52M58 125 aa10.18□□□□□ -0.78
COL1A1-201ENST00000225964 ZNF407Q9C0G0 2248 aa10.17□□□□□ -0.78
COL1A1-201ENST00000225964 CXCL5P42830 114 aa10.17□□□□□ -0.78
COL1A1-201ENST00000225964 MAP6D1Q9H9H5 199 aa10.16□□□□□ -0.78
COL1A1-201ENST00000225964 LINC01545Q5VT33 79 aa10.16□□□□□ -0.78
COL1A1-201ENST00000225964 TMEM131Q92545 1883 aa10.16□□□□□ -0.78
COL1A1-201ENST00000225964 PSMB8P28062 276 aa10.16□□□□□ -0.78
COL1A1-201ENST00000225964 DOPEY2Q9Y3R5 2298 aa10.16□□□□□ -0.78
COL1A1-201ENST00000225964 INAFM1C9JVW0 142 aa10.16□□□□□ -0.78
COL1A1-201ENST00000225964 SPATA25Q9BR10 227 aa10.15□□□□□ -0.78
COL1A1-201ENST00000225964 TMEM89A2RUT3 159 aa10.15□□□□□ -0.78
COL1A1-201ENST00000225964 TEX22C9J3V5 150 aa10.15□□□□□ -0.78
COL1A1-201ENST00000225964 IGKV1-17P01599 117 aa10.15□□□□□ -0.78
COL1A1-201ENST00000225964 A0A0B4J2C4 111 aa10.15□□□□□ -0.78
COL1A1-201ENST00000225964 NPSP0C0P6 89 aa10.15□□□□□ -0.78
COL1A1-201ENST00000225964 SIRPDQ9H106 197 aa10.15□□□□□ -0.78
COL1A1-201ENST00000225964 TRAV26-1A0A087WT03 109 aa10.15□□□□□ -0.79
COL1A1-201ENST00000225964 A4D1N5 150 aa10.15□□□□□ -0.79
COL1A1-201ENST00000225964 HILS1P60008 231 aa10.15□□□□□ -0.79
COL1A1-201ENST00000225964 A6NDX4 124 aa10.15□□□□□ -0.79
COL1A1-201ENST00000225964 ACYP1P07311 99 aa10.15□□□□□ -0.79
COL1A1-201ENST00000225964 KRTAP27-1Q3LI81 207 aa10.15□□□□□ -0.79
COL1A1-201ENST00000225964 TOMM6Q96B49 74 aa10.15□□□□□ -0.79
COL1A1-201ENST00000225964 PRO0255Q9UI72 69 aa10.15□□□□□ -0.79
COL1A1-201ENST00000225964 PATE2Q6UY27 113 aa10.14□□□□□ -0.79
COL1A1-201ENST00000225964 MDFICQ9P1T7 246 aa10.14□□□□□ -0.79
COL1A1-201ENST00000225964 PRORYQ9H606 182 aa10.14□□□□□ -0.79
COL1A1-201ENST00000225964 IL15RAQ13261 267 aa10.14□□□□□ -0.79
COL1A1-201ENST00000225964 IGKV4-1P06312 121 aa10.14□□□□□ -0.79
COL1A1-201ENST00000225964 FAM110AQ9BQ89 295 aa10.14□□□□□ -0.79
COL1A1-201ENST00000225964 CRYGDP07320 174 aa10.13□□□□□ -0.79
COL1A1-201ENST00000225964 UNQ9165/PRO28630Q6UXU0 137 aa10.13□□□□□ -0.79
COL1A1-201ENST00000225964 USF3Q68DE3 2245 aa10.13□□□□□ -0.79
COL1A1-201ENST00000225964 LECT2O14960 151 aa10.13□□□□□ -0.79
COL1A1-201ENST00000225964 MIR7-3HGQ8N6C7 128 aa10.13□□□□□ -0.79
COL1A1-201ENST00000225964 C10orf91Q5T1B1 145 aa10.12□□□□□ -0.79
COL1A1-201ENST00000225964 CADP27708 2225 aa10.12□□□□□ -0.79
COL1A1-201ENST00000225964 DENND4CQ5VZ89 1909 aa10.12□□□□□ -0.79
COL1A1-201ENST00000225964 IGHV4-31P0DP07 118 aa10.12□□□□□ -0.79
COL1A1-201ENST00000225964 COX7BP24311 80 aa10.12□□□□□ -0.79
COL1A1-201ENST00000225964 Q6ZVH6 145 aa10.12□□□□□ -0.79
COL1A1-201ENST00000225964 LINC00173Q6ZV60 143 aa10.12□□□□□ -0.79
COL1A1-201ENST00000225964 SPTBN1Q01082 2364 aaKnown RBP10.11□□□□□ -0.79
COL1A1-201ENST00000225964 CLEC2BQ92478 149 aa10.11□□□□□ -0.79
COL1A1-201ENST00000225964 LOXL1Q08397 574 aaPredicted RBP10.11□□□□□ -0.79
COL1A1-201ENST00000225964 LINC00269Q8N2A0 174 aa10.11□□□□□ -0.79
COL1A1-201ENST00000225964 HIGD2AQ9BW72 106 aa10.11□□□□□ -0.79
COL1A1-201ENST00000225964 DEFB131BA0A096LNP1 70 aa10.1□□□□□ -0.79
COL1A1-201ENST00000225964 TRBV6-1A0A0K0K1D8 114 aa10.1□□□□□ -0.79
COL1A1-201ENST00000225964 LGALS9O00182 355 aa10.1□□□□□ -0.79
COL1A1-201ENST00000225964 MED14OSP0DP75 135 aa10.1□□□□□ -0.79
COL1A1-201ENST00000225964 LINC01620Q4KN68 170 aa10.1□□□□□ -0.79
COL1A1-201ENST00000225964 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
COL1A1-201ENST00000225964 DYSFO75923 2080 aa10.1□□□□□ -0.79
COL1A1-201ENST00000225964 A0A087WZ39 114 aa10.1□□□□□ -0.79
COL1A1-201ENST00000225964 C19orf84I3L1E1 186 aa10.1□□□□□ -0.79
COL1A1-201ENST00000225964 P0DMU3 169 aa10.1□□□□□ -0.79
COL1A1-201ENST00000225964 FAM231AP0DMU4 169 aa10.1□□□□□ -0.79
COL1A1-201ENST00000225964 FAM231CP0DMU5 169 aa10.1□□□□□ -0.79
COL1A1-201ENST00000225964 A0A096LNI7 61 aa10.09□□□□□ -0.79
COL1A1-201ENST00000225964 FAM19A1Q7Z5A9 133 aa10.09□□□□□ -0.79
COL1A1-201ENST00000225964 TP53TG3Q9ULZ0 132 aa10.09□□□□□ -0.79
COL1A1-201ENST00000225964 LRRC75A-AS1Q8N1F1 130 aa10.09□□□□□ -0.79
COL1A1-201ENST00000225964 CNOT1A5YKK6 2376 aaKnown RBP10.09□□□□□ -0.79
COL1A1-201ENST00000225964 A0A0J9YX75 114 aa10.09□□□□□ -0.79
COL1A1-201ENST00000225964 CASC2Q6XLA1 102 aa10.09□□□□□ -0.79
COL1A1-201ENST00000225964 NFE4Q86UQ8 179 aa10.09□□□□□ -0.79
COL1A1-201ENST00000225964 ODF3L1Q8IXM7 274 aa10.09□□□□□ -0.79
COL1A1-201ENST00000225964 LYPD6BQ8NI32 183 aa10.09□□□□□ -0.79
COL1A1-201ENST00000225964 TNRC6AQ8NDV7 1962 aaKnown RBP10.09□□□□□ -0.79
COL1A1-201ENST00000225964 A0A1W2PNU3 283 aaPredicted RBP10.08□□□□□ -0.8
COL1A1-201ENST00000225964 REG3AQ06141 175 aa10.08□□□□□ -0.8
COL1A1-201ENST00000225964 CEMP1Q6PRD7 247 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms