RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 PLNP26678 52 aa10.91□□□□□ -0.66
CNOT3-201ENST00000221232 UFSP1Q6NVU6 142 aa10.91□□□□□ -0.66
CNOT3-201ENST00000221232 C18orf65Q6ZTR6 163 aa10.91□□□□□ -0.66
CNOT3-201ENST00000221232 NEXN-AS1Q8NBZ9 246 aa10.91□□□□□ -0.66
CNOT3-201ENST00000221232 FABP2P12104 132 aa10.91□□□□□ -0.66
CNOT3-201ENST00000221232 HLA-DRB4P13762 266 aa10.91□□□□□ -0.66
CNOT3-201ENST00000221232 LINC00315P59091 139 aa10.91□□□□□ -0.66
CNOT3-201ENST00000221232 TP53TG1Q9Y2A0 90 aa10.91□□□□□ -0.66
CNOT3-201ENST00000221232 HLA-DRB4X5D2U9 266 aa10.91□□□□□ -0.66
CNOT3-201ENST00000221232 TEX15Q9BXT5 2789 aa10.9□□□□□ -0.66
CNOT3-201ENST00000221232 MYO9AB2RTY4 2548 aa10.9□□□□□ -0.66
CNOT3-201ENST00000221232 IGHV4OR15-8A0A075B7B6 117 aa10.9□□□□□ -0.66
CNOT3-201ENST00000221232 A0A087WW49 117 aa10.9□□□□□ -0.66
CNOT3-201ENST00000221232 OR11H12B2RN74 326 aa10.9□□□□□ -0.66
CNOT3-201ENST00000221232 SCGB2A2Q13296 93 aa10.9□□□□□ -0.66
CNOT3-201ENST00000221232 LINC01356Q8N9X3 169 aa10.9□□□□□ -0.66
CNOT3-201ENST00000221232 OR11H1Q8NG94 326 aa10.9□□□□□ -0.66
CNOT3-201ENST00000221232 OR11H2Q8NH07 326 aa10.9□□□□□ -0.66
CNOT3-201ENST00000221232 SONP18583 2426 aaKnown RBP10.9□□□□□ -0.66
CNOT3-201ENST00000221232 IGHV3-73A0A0B4J1V6 119 aa10.9□□□□□ -0.67
CNOT3-201ENST00000221232 Q8N1Y9 231 aa10.9□□□□□ -0.67
CNOT3-201ENST00000221232 KIF25-AS1Q9Y6Z4 181 aa10.9□□□□□ -0.67
CNOT3-201ENST00000221232 ZNF56Q15929 161 aa10.89□□□□□ -0.67
CNOT3-201ENST00000221232 OPRPNQ99935 248 aaPredicted RBP10.89□□□□□ -0.67
CNOT3-201ENST00000221232 HIGD1BQ9P298 99 aa10.89□□□□□ -0.67
CNOT3-201ENST00000221232 MTURNQ8N3F0 131 aa10.89□□□□□ -0.67
CNOT3-201ENST00000221232 K7EMT4 169 aa10.88□□□□□ -0.67
CNOT3-201ENST00000221232 KRTAP10-9P60411 292 aa10.88□□□□□ -0.67
CNOT3-201ENST00000221232 SNRPD3P62318 126 aaKnown RBP10.88□□□□□ -0.67
CNOT3-201ENST00000221232 SFTA2Q6UW10 78 aa10.88□□□□□ -0.67
CNOT3-201ENST00000221232 APRG1Q8IVJ8 170 aa10.88□□□□□ -0.67
CNOT3-201ENST00000221232 PRADC1Q9BSG0 188 aa10.88□□□□□ -0.67
CNOT3-201ENST00000221232 SDHAF1A6NFY7 115 aa10.88□□□□□ -0.67
CNOT3-201ENST00000221232 SLC25A16P16260 332 aa10.88□□□□□ -0.67
CNOT3-201ENST00000221232 KNCNA6PVL3 124 aa10.87□□□□□ -0.67
CNOT3-201ENST00000221232 HOXA3O43365 443 aaPredicted RBP10.87□□□□□ -0.67
CNOT3-201ENST00000221232 BRI3O95415 125 aa10.87□□□□□ -0.67
CNOT3-201ENST00000221232 MYMXA0A1B0GTQ4 84 aa10.87□□□□□ -0.67
CNOT3-201ENST00000221232 TSHBP01222 138 aa10.87□□□□□ -0.67
CNOT3-201ENST00000221232 KHDC1LQ5JSQ8 128 aa10.87□□□□□ -0.67
CNOT3-201ENST00000221232 ZFP2Q6ZN57 461 aa10.87□□□□□ -0.67
CNOT3-201ENST00000221232 NOTCH3Q9UM47 2321 aa10.87□□□□□ -0.67
CNOT3-201ENST00000221232 TRAV12-1A0A0B4J245 112 aa10.87□□□□□ -0.67
CNOT3-201ENST00000221232 A0A0J9YX75 114 aa10.87□□□□□ -0.67
CNOT3-201ENST00000221232 CRYGDP07320 174 aa10.87□□□□□ -0.67
CNOT3-201ENST00000221232 HOXD3P31249 432 aaPredicted RBP10.87□□□□□ -0.67
CNOT3-201ENST00000221232 AMTNQ6UX39 209 aa10.87□□□□□ -0.67
CNOT3-201ENST00000221232 SCGB1D4Q6XE38 83 aa10.87□□□□□ -0.67
CNOT3-201ENST00000221232 ZNF815PA8K554 130 aa10.86□□□□□ -0.67
CNOT3-201ENST00000221232 SLURP1P55000 103 aa10.86□□□□□ -0.67
CNOT3-201ENST00000221232 RPL24P83731 157 aaKnown RBP10.86□□□□□ -0.67
CNOT3-201ENST00000221232 PLEKHB2Q96CS7 222 aa10.86□□□□□ -0.67
CNOT3-201ENST00000221232 IGHV3-16A0A0C4DH30 117 aa10.86□□□□□ -0.67
CNOT3-201ENST00000221232 C11orf86A6NJI1 115 aa10.86□□□□□ -0.67
CNOT3-201ENST00000221232 C12orf74Q32Q52 190 aa10.86□□□□□ -0.67
CNOT3-201ENST00000221232 KIR2DL4Q99706 377 aa10.86□□□□□ -0.67
CNOT3-201ENST00000221232 SETD2Q9BYW2 2564 aaPredicted RBP10.85□□□□□ -0.67
CNOT3-201ENST00000221232 MED14OSP0DP75 135 aa10.85□□□□□ -0.67
CNOT3-201ENST00000221232 PHLDA1Q8WV24 401 aaPredicted RBP10.85□□□□□ -0.67
CNOT3-201ENST00000221232 TM2D2Q9BX73 214 aa10.85□□□□□ -0.67
CNOT3-201ENST00000221232 K7EQG2 157 aa10.85□□□□□ -0.67
CNOT3-201ENST00000221232 ZNF876PQ49A33 203 aa10.85□□□□□ -0.67
CNOT3-201ENST00000221232 TMEM170BQ5T4T1 132 aa10.85□□□□□ -0.67
CNOT3-201ENST00000221232 K7ERU9 68 aa10.84□□□□□ -0.67
CNOT3-201ENST00000221232 LGALS1P09382 135 aaKnown RBP10.84□□□□□ -0.67
CNOT3-201ENST00000221232 POLR2KP53803 58 aaKnown RBP10.84□□□□□ -0.67
CNOT3-201ENST00000221232 TCTEX1D4Q5JR98 221 aa10.84□□□□□ -0.67
CNOT3-201ENST00000221232 VCYO14598 125 aa10.84□□□□□ -0.67
CNOT3-201ENST00000221232 ZNF469Q96JG9 3925 aaPredicted RBP10.83□□□□□ -0.67
CNOT3-201ENST00000221232 IGHV3-64A0A075B6Q5 118 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 IGLL5B9A064 214 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 P0DMU3 169 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 FAM231AP0DMU4 169 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 FAM231CP0DMU5 169 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 GATA3P23771 443 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 PROK1P58294 105 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 SRSF9Q13242 221 aaKnown RBP eCLIP10.83□□□□□ -0.68
CNOT3-201ENST00000221232 BBC3Q96PG8 261 aaPredicted RBP10.83□□□□□ -0.68
CNOT3-201ENST00000221232 WNK1Q9H4A3 2382 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 IGHV1OR15-1A0A075B7D0 117 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 COX6B1P14854 86 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 TRBV7-9A0A0J9YWB2 115 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 H3BMG7 143 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 PPP1R17O96001 155 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 DEFB131AP59861 70 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 C11orf44Q8N8P7 122 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 ZNF479Q96JC4 524 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 VPREB3Q9UKI3 123 aa10.83□□□□□ -0.68
CNOT3-201ENST00000221232 CCDC168Q8NDH2 2452 aa10.82□□□□□ -0.68
CNOT3-201ENST00000221232 NXPH4O95158 308 aa10.82□□□□□ -0.68
CNOT3-201ENST00000221232 DSCR9P59020 149 aa10.82□□□□□ -0.68
CNOT3-201ENST00000221232 MORN3Q6PF18 240 aaPredicted RBP10.82□□□□□ -0.68
CNOT3-201ENST00000221232 ZNF702PQ9H963 129 aa10.82□□□□□ -0.68
CNOT3-201ENST00000221232 USP24Q9UPU5 2620 aa10.82□□□□□ -0.68
CNOT3-201ENST00000221232 IGIPA6NJ69 53 aa10.82□□□□□ -0.68
CNOT3-201ENST00000221232 EPG5Q9HCE0 2579 aa10.81□□□□□ -0.68
CNOT3-201ENST00000221232 PRRC2AP48634 2157 aaKnown RBP10.81□□□□□ -0.68
CNOT3-201ENST00000221232 A0A096LNT2 108 aa10.81□□□□□ -0.68
CNOT3-201ENST00000221232 E9PLD3 99 aa10.81□□□□□ -0.68
CNOT3-201ENST00000221232 RBMY1A1P0DJD3 496 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms